EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0026549 (Gene tree)
Gene ID
110293213
Gene Symbol
Pum1
Alias
Pumm
Full Name
pumilio RNA binding family member 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
114649 bases
Position
chr4:120306218-120420866
Accession
110293213
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7118
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7128
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7138
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7148
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7158
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7168
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7178
MGP_CAROLIEiJ_P0064753PUFPF00806.197.8e-7188
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7018
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7028
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7038
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7048
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7058
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7068
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7078
MGP_CAROLIEiJ_P0064756PUFPF00806.195.9e-7088
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7018
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7028
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7038
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7048
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7058
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7068
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7078
MGP_CAROLIEiJ_P0064752PUFPF00806.196.7e-7088
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6918
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6928
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6938
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6948
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6958
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6968
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6978
MGP_CAROLIEiJ_P0064757PUFPF00806.191.4e-6988
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6918
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6928
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6938
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6948
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6958
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6968
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6978
MGP_CAROLIEiJ_P0064751PUFPF00806.191.4e-6988
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0064754-1285--- (aa)--
MGP_CAROLIEiJ_T0064755-693-MGP_CAROLIEiJ_P0064755218 (aa)--
MGP_CAROLIEiJ_T0064756-4017-MGP_CAROLIEiJ_P00647561186 (aa)-UPI000A314C7F
MGP_CAROLIEiJ_T0064757-3990XM_021161058MGP_CAROLIEiJ_P00647571188 (aa)XP_021016717UPI000A314E98
MGP_CAROLIEiJ_T0064751-5389XM_021161047MGP_CAROLIEiJ_P00647511189 (aa)XP_021016706UPI000A31A0F9
MGP_CAROLIEiJ_T0064752-5058XM_021161061MGP_CAROLIEiJ_P00647521092 (aa)XP_021016720UPI000A3150A2
MGP_CAROLIEiJ_T0064753-4614-MGP_CAROLIEiJ_P0064753944 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0026549's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026549's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0026549Pum18687.059MGP_CAROLIEiJ_G0017603Pum210088.592
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0026549Pum110098.738ENSG00000134644PUM1100100.000Homo_sapiens
MGP_CAROLIEiJ_G0026549Pum19092.010ENSAPOG00000021632pum110091.525Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026549Pum110098.611ENSAMEG00000017656PUM19798.487Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026549Pum110080.941ENSACIG00000021013pum110075.497Amphilophus_citrinellus
MGP_CAROLIEiJ_G0026549Pum19092.010ENSAOCG00000003944pum110091.525Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026549Pum19092.010ENSAPEG00000014550pum110091.525Amphiprion_percula
MGP_CAROLIEiJ_G0026549Pum19092.010ENSATEG00000016004pum110091.525Anabas_testudineus
MGP_CAROLIEiJ_G0026549Pum110097.139ENSAPLG00000009351PUM110096.888Anas_platyrhynchos
MGP_CAROLIEiJ_G0026549Pum110095.392ENSACAG00000000682PUM19895.034Anolis_carolinensis
MGP_CAROLIEiJ_G0026549Pum110098.611ENSANAG00000027865PUM110099.029Aotus_nancymaae
MGP_CAROLIEiJ_G0026549Pum19076.367ENSACLG00000019354pum110077.798Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026549Pum110083.871ENSAMXG00000020607pum19678.344Astyanax_mexicanus
MGP_CAROLIEiJ_G0026549Pum110098.651ENSBTAG00000018979PUM110099.034Bos_taurus
MGP_CAROLIEiJ_G0026549Pum110098.654ENSCJAG00000006035PUM110099.272Callithrix_jacchus
MGP_CAROLIEiJ_G0026549Pum110098.611ENSCAFG00000011205PUM110096.299Canis_familiaris
MGP_CAROLIEiJ_G0026549Pum19296.451ENSCAFG00020024616PUM110097.092Canis_lupus_dingo
MGP_CAROLIEiJ_G0026549Pum110098.651ENSCHIG00000012952PUM110099.029Capra_hircus
MGP_CAROLIEiJ_G0026549Pum110098.402ENSTSYG00000008868PUM110098.402Carlito_syrichta
MGP_CAROLIEiJ_G0026549Pum110098.738ENSCPOG00000031613PUM110098.738Cavia_porcellus
MGP_CAROLIEiJ_G0026549Pum110098.626ENSCATG00000017991PUM110099.275Cercocebus_atys
MGP_CAROLIEiJ_G0026549Pum110098.823ENSCLAG00000007662PUM110099.757Chinchilla_lanigera
MGP_CAROLIEiJ_G0026549Pum110098.611ENSCSAG00000001028PUM110097.833Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026549Pum19298.611ENSCHOG00000010245PUM19395.827Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026549Pum110096.928ENSCPBG00000009288PUM110098.301Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026549Pum110098.737ENSCANG00000042606PUM110099.272Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026549Pum110099.306ENSCGRG00001024949Pum110099.306Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026549Pum110099.306ENSCGRG00000014197Pum110099.306Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026549Pum19075.788ENSCSEG00000015981pum110077.108Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026549Pum110080.446ENSCVAG00000007043pum110074.711Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026549Pum110084.491ENSDARG00000099256pum110078.930Danio_rerio
MGP_CAROLIEiJ_G0026549Pum110098.611ENSDNOG00000010939PUM110098.150Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026549Pum19099.757ENSDORG00000001875Pum110099.757Dipodomys_ordii
MGP_CAROLIEiJ_G0026549Pum18892.773ENSETEG00000004355PUM18792.773Echinops_telfairi
MGP_CAROLIEiJ_G0026549Pum110098.611ENSEASG00005010813PUM110098.316Equus_asinus_asinus
MGP_CAROLIEiJ_G0026549Pum110098.234ENSECAG00000021369PUM110098.234Equus_caballus
MGP_CAROLIEiJ_G0026549Pum18098.611ENSEEUG00000003871PUM17499.322Erinaceus_europaeus
MGP_CAROLIEiJ_G0026549Pum110082.864ENSELUG00000002409pum110083.002Esox_lucius
MGP_CAROLIEiJ_G0026549Pum110098.738ENSFCAG00000010374PUM110099.167Felis_catus
MGP_CAROLIEiJ_G0026549Pum110096.044ENSFALG00000001214PUM19794.724Ficedula_albicollis
MGP_CAROLIEiJ_G0026549Pum110098.570ENSFDAG00000011319PUM110098.570Fukomys_damarensis
MGP_CAROLIEiJ_G0026549Pum17087.833ENSGMOG00000010491pum110074.175Gadus_morhua
MGP_CAROLIEiJ_G0026549Pum110097.264ENSGALG00000042598PUM110097.056Gallus_gallus
MGP_CAROLIEiJ_G0026549Pum110080.569ENSGAFG00000015617pum110090.799Gambusia_affinis
MGP_CAROLIEiJ_G0026549Pum110080.665ENSGACG00000005717pum110075.288Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026549Pum110096.766ENSGAGG00000001290PUM110096.636Gopherus_agassizii
MGP_CAROLIEiJ_G0026549Pum110098.737ENSGGOG00000011983PUM110099.272Gorilla_gorilla
MGP_CAROLIEiJ_G0026549Pum110080.693ENSHBUG00000018718pum110075.289Haplochromis_burtoni
MGP_CAROLIEiJ_G0026549Pum110098.402ENSHGLG00000013819Pum110098.402Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026549Pum110098.402ENSHGLG00100008621Pum110098.402Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026549Pum19074.630ENSHCOG00000005149pum110074.468Hippocampus_comes
MGP_CAROLIEiJ_G0026549Pum110082.266ENSIPUG00000020421pum110077.307Ictalurus_punctatus
MGP_CAROLIEiJ_G0026549Pum110098.990ENSSTOG00000010757PUM110098.990Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026549Pum110098.653ENSJJAG00000000530Pum110098.653Jaculus_jaculus
MGP_CAROLIEiJ_G0026549Pum110080.074ENSKMAG00000003481pum110074.876Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026549Pum110080.050ENSLBEG00000002527pum110075.476Labrus_bergylta
MGP_CAROLIEiJ_G0026549Pum110088.228ENSLACG00000017188PUM19986.261Latimeria_chalumnae
MGP_CAROLIEiJ_G0026549Pum110091.180ENSLOCG00000005210pum19987.896Lepisosteus_oculatus
MGP_CAROLIEiJ_G0026549Pum110097.897ENSLAFG00000003178PUM110097.897Loxodonta_africana
MGP_CAROLIEiJ_G0026549Pum110098.626ENSMFAG00000010291PUM110099.275Macaca_fascicularis
MGP_CAROLIEiJ_G0026549Pum110098.626ENSMMUG00000013520PUM110099.272Macaca_mulatta
MGP_CAROLIEiJ_G0026549Pum110098.737ENSMNEG00000034639PUM110099.272Macaca_nemestrina
MGP_CAROLIEiJ_G0026549Pum110098.737ENSMLEG00000038743PUM110099.272Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026549Pum110080.693ENSMAMG00000011606pum110075.372Mastacembelus_armatus
MGP_CAROLIEiJ_G0026549Pum110080.693ENSMZEG00005005834pum110075.289Maylandia_zebra
MGP_CAROLIEiJ_G0026549Pum110096.891ENSMGAG00000000724PUM110096.804Meleagris_gallopavo
MGP_CAROLIEiJ_G0026549Pum110099.306ENSMAUG00000022090Pum110099.306Mesocricetus_auratus
MGP_CAROLIEiJ_G0026549Pum19996.624ENSMICG00000012213-10095.631Microcebus_murinus
MGP_CAROLIEiJ_G0026549Pum110098.570ENSMICG00000007713-10099.029Microcebus_murinus
MGP_CAROLIEiJ_G0026549Pum110099.075ENSMOCG00000015463Pum110099.075Microtus_ochrogaster
MGP_CAROLIEiJ_G0026549Pum19088.684ENSMMOG00000019817pum110091.283Mola_mola
MGP_CAROLIEiJ_G0026549Pum110097.059ENSMODG00000017067PUM110097.059Monodelphis_domestica
MGP_CAROLIEiJ_G0026549Pum19088.915ENSMALG00000016399pum110091.525Monopterus_albus
MGP_CAROLIEiJ_G0026549Pum110099.788ENSMUSG00000028580Pum110099.788Mus_musculus
MGP_CAROLIEiJ_G0026549Pum110099.817MGP_PahariEiJ_G0028881Pum110099.817Mus_pahari
MGP_CAROLIEiJ_G0026549Pum110099.748MGP_SPRETEiJ_G0027529Pum110099.748Mus_spretus
MGP_CAROLIEiJ_G0026549Pum110098.611ENSMPUG00000015454PUM110098.401Mustela_putorius_furo
MGP_CAROLIEiJ_G0026549Pum110098.611ENSMLUG00000006490PUM110098.231Myotis_lucifugus
MGP_CAROLIEiJ_G0026549Pum110098.738ENSNGAG00000002378Pum110098.876Nannospalax_galili
MGP_CAROLIEiJ_G0026549Pum110078.033ENSNBRG00000010689pum110082.921Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026549Pum110097.917ENSNLEG00000001151PUM110097.917Nomascus_leucogenys
MGP_CAROLIEiJ_G0026549Pum18496.284ENSMEUG00000000976-8296.284Notamacropus_eugenii
MGP_CAROLIEiJ_G0026549Pum184100.000ENSOPRG00000001776PUM173100.000Ochotona_princeps
MGP_CAROLIEiJ_G0026549Pum110098.653ENSODEG00000003465PUM110098.653Octodon_degus
MGP_CAROLIEiJ_G0026549Pum110081.250ENSONIG00000002290pum110075.620Oreochromis_niloticus
MGP_CAROLIEiJ_G0026549Pum18177.152ENSOANG00000004902-10077.152Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0026549Pum110098.611ENSOCUG00000008641PUM19998.315Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026549Pum110081.559ENSORLG00000011482pum110075.618Oryzias_latipes
MGP_CAROLIEiJ_G0026549Pum110081.683ENSORLG00020019461pum110075.618Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026549Pum110081.683ENSORLG00015011375pum110075.700Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026549Pum19093.220ENSOMEG00000009312pum110090.799Oryzias_melastigma
MGP_CAROLIEiJ_G0026549Pum110097.917ENSOGAG00000011063PUM110095.718Otolemur_garnettii
MGP_CAROLIEiJ_G0026549Pum110098.611ENSOARG00000001899PUM110099.029Ovis_aries
MGP_CAROLIEiJ_G0026549Pum110098.737ENSPPAG00000044003PUM110099.272Pan_paniscus
MGP_CAROLIEiJ_G0026549Pum110098.737ENSPPRG00000001370PUM110098.611Panthera_pardus
MGP_CAROLIEiJ_G0026549Pum110098.611ENSPTIG00000010798PUM110098.611Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026549Pum110098.737ENSPTRG00000000453PUM110099.272Pan_troglodytes
MGP_CAROLIEiJ_G0026549Pum110098.737ENSPANG00000016338PUM110099.275Papio_anubis
MGP_CAROLIEiJ_G0026549Pum110082.375ENSPKIG00000010578pum110077.888Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026549Pum110097.257ENSPSIG00000014118PUM110097.138Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026549Pum110076.403ENSPMGG00000005836pum110081.373Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026549Pum110099.306ENSPEMG00000010009Pum110099.306Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026549Pum110097.065ENSPCIG00000014151PUM110097.826Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026549Pum19383.374ENSPFOG00000007289pum19981.651Poecilia_formosa
MGP_CAROLIEiJ_G0026549Pum110082.469ENSPLAG00000007256pum110077.617Poecilia_latipinna
MGP_CAROLIEiJ_G0026549Pum18582.593ENSPMEG00000019543pum19977.829Poecilia_mexicana
MGP_CAROLIEiJ_G0026549Pum110080.569ENSPREG00000005195pum110080.437Poecilia_reticulata
MGP_CAROLIEiJ_G0026549Pum110098.611ENSPPYG00000001621PUM110096.782Pongo_abelii
MGP_CAROLIEiJ_G0026549Pum18498.457ENSPCAG00000001979PUM17498.457Procavia_capensis
MGP_CAROLIEiJ_G0026549Pum110098.570ENSPCOG00000004398PUM110099.029Propithecus_coquereli
MGP_CAROLIEiJ_G0026549Pum110098.611ENSPVAG00000005207PUM19796.380Pteropus_vampyrus
MGP_CAROLIEiJ_G0026549Pum110080.693ENSPNYG00000009518pum110082.082Pundamilia_nyererei
MGP_CAROLIEiJ_G0026549Pum110080.378ENSPNAG00000026728pum110079.749Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026549Pum110099.578ENSRNOG00000011709Pum110099.578Rattus_norvegicus
MGP_CAROLIEiJ_G0026549Pum110098.737ENSRBIG00000042521PUM110099.275Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026549Pum110098.737ENSRROG00000020156PUM110099.272Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026549Pum110098.738ENSSBOG00000032037PUM110099.272Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026549Pum110096.891ENSSHAG00000010918PUM110096.891Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026549Pum110080.693ENSSMAG00000010918pum110091.525Scophthalmus_maximus
MGP_CAROLIEiJ_G0026549Pum110080.817ENSSDUG00000009021pum110076.198Seriola_dumerili
MGP_CAROLIEiJ_G0026549Pum110080.817ENSSLDG00000009667pum110078.238Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026549Pum19998.611ENSSARG00000003055PUM19199.115Sorex_araneus
MGP_CAROLIEiJ_G0026549Pum110097.011ENSSPUG00000006267PUM110096.380Sphenodon_punctatus
MGP_CAROLIEiJ_G0026549Pum19092.010ENSSPAG00000016636pum110091.525Stegastes_partitus
MGP_CAROLIEiJ_G0026549Pum110098.823ENSSSCG00000003591PUM110099.167Sus_scrofa
MGP_CAROLIEiJ_G0026549Pum110080.569ENSTRUG00000013121pum110082.550Takifugu_rubripes
MGP_CAROLIEiJ_G0026549Pum110080.346ENSTNIG00000016983pum19976.183Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026549Pum18796.341ENSTBEG00000013810PUM18996.341Tupaia_belangeri
MGP_CAROLIEiJ_G0026549Pum19298.449ENSTTRG00000007436PUM19098.449Tursiops_truncatus
MGP_CAROLIEiJ_G0026549Pum19998.244ENSUAMG00000018262-10098.244Ursus_americanus
MGP_CAROLIEiJ_G0026549Pum19599.034ENSUMAG00000009211PUM110099.034Ursus_maritimus
MGP_CAROLIEiJ_G0026549Pum110098.257ENSVPAG00000005902PUM19298.983Vicugna_pacos
MGP_CAROLIEiJ_G0026549Pum110098.611ENSVVUG00000014631PUM110099.034Vulpes_vulpes
MGP_CAROLIEiJ_G0026549Pum110087.950ENSXETG00000012904pum19986.818Xenopus_tropicalis
MGP_CAROLIEiJ_G0026549Pum110080.569ENSXMAG00000002945pum110076.788Xiphophorus_maculatus

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