EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026555 (Gene tree)
Gene ID: 110292983
Gene Symbol: Srsf4
Alias: 5730499P16Rik|MNCb-2616|SRp75|Sfrs4
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 28105 bases
Position: chr4:121514528-121542632
Accession: 110292983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0064793	RRM_1	PF00076.22	4.7e-31	1	2
MGP_CAROLIEiJ_P0064793	RRM_1	PF00076.22	4.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0064793	-	2261	XM_021160695	MGP_CAROLIEiJ_P0064793	492 (aa)	XP_021016354	UPI000A319C91
MGP_CAROLIEiJ_T0064794	-	851	-	MGP_CAROLIEiJ_P0064794	55 (aa)	-	-
MGP_CAROLIEiJ_T0064795	-	980	-	MGP_CAROLIEiJ_P0064795	31 (aa)	-	UPI00053BD782
MGP_CAROLIEiJ_T0064796	-	3102	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0064797	-	1479	-	MGP_CAROLIEiJ_P0064797	492 (aa)	XP_021016353	UPI000A31B249

Gene Model

Click here to download MGP_CAROLIEiJ_G0026555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026555	Srsf4	92	83.589	ENSG00000116350	SRSF4	81	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.017	ENSAMEG00000000594	SRSF4	93	80.819	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026555	Srsf4	85	68.269	ENSAPLG00000006595	-	92	70.883	Anas_platyrhynchos
MGP_CAROLIEiJ_G0026555	Srsf4	92	73.707	ENSANAG00000037134	SRSF4	100	83.486	Aotus_nancymaae
MGP_CAROLIEiJ_G0026555	Srsf4	92	82.251	ENSBTAG00000013309	SRSF4	92	81.466	Bos_taurus
MGP_CAROLIEiJ_G0026555	Srsf4	92	83.801	ENSCJAG00000047192	SRSF4	93	85.129	Callithrix_jacchus
MGP_CAROLIEiJ_G0026555	Srsf4	89	79.287	ENSCAFG00000011669	SRSF4	90	81.019	Canis_familiaris
MGP_CAROLIEiJ_G0026555	Srsf4	92	80.652	ENSCAFG00020023963	SRSF4	92	79.176	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026555	Srsf4	92	78.776	ENSCHIG00000022096	SRSF4	91	100.000	Capra_hircus
MGP_CAROLIEiJ_G0026555	Srsf4	92	80.819	ENSTSYG00000007903	SRSF4	93	82.759	Carlito_syrichta
MGP_CAROLIEiJ_G0026555	Srsf4	92	75.109	ENSCAPG00000014747	SRSF4	92	75.817	Cavia_aperea
MGP_CAROLIEiJ_G0026555	Srsf4	92	82.151	ENSCPOG00000036234	SRSF4	93	82.759	Cavia_porcellus
MGP_CAROLIEiJ_G0026555	Srsf4	67	78.235	ENSCCAG00000033585	SRSF4	90	80.059	Cebus_capucinus
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSCATG00000031440	SRSF4	93	82.684	Cercocebus_atys
MGP_CAROLIEiJ_G0026555	Srsf4	92	81.425	ENSCLAG00000009008	SRSF4	93	82.684	Chinchilla_lanigera
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSCSAG00000001022	SRSF4	93	82.684	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026555	Srsf4	85	79.669	ENSCHOG00000013858	SRSF4	93	77.752	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026555	Srsf4	67	88.554	ENSCPBG00000009020	SRSF4	93	75.322	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSCANG00000028667	SRSF4	93	82.684	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026555	Srsf4	92	91.868	ENSCGRG00001021115	Srsf4	92	91.466	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026555	Srsf4	85	88.305	ENSCGRG00000014137	Srsf4	92	90.736	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026555	Srsf4	92	80.426	ENSDNOG00000047961	SRSF4	93	85.381	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026555	Srsf4	92	66.593	ENSDORG00000002459	Srsf4	93	71.957	Dipodomys_ordii
MGP_CAROLIEiJ_G0026555	Srsf4	82	100.000	ENSETEG00000009774	SRSF4	93	70.043	Echinops_telfairi
MGP_CAROLIEiJ_G0026555	Srsf4	92	85.097	ENSEASG00005010168	SRSF4	93	86.207	Equus_asinus_asinus
MGP_CAROLIEiJ_G0026555	Srsf4	92	85.097	ENSECAG00000021350	SRSF4	93	86.207	Equus_caballus
MGP_CAROLIEiJ_G0026555	Srsf4	67	91.018	ENSEEUG00000008479	SRSF4	92	76.304	Erinaceus_europaeus
MGP_CAROLIEiJ_G0026555	Srsf4	53	56.146	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
MGP_CAROLIEiJ_G0026555	Srsf4	66	92.615	ENSFCAG00000027821	SRSF4	92	80.870	Felis_catus
MGP_CAROLIEiJ_G0026555	Srsf4	92	72.467	ENSFALG00000001346	SRSF4	92	70.989	Ficedula_albicollis
MGP_CAROLIEiJ_G0026555	Srsf4	61	83.333	ENSFDAG00000007332	SRSF4	92	78.454	Fukomys_damarensis
MGP_CAROLIEiJ_G0026555	Srsf4	52	68.110	ENSFHEG00000007472	srsf4	90	86.905	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026555	Srsf4	92	73.009	ENSGALG00000050314	SRSF4	92	70.110	Gallus_gallus
MGP_CAROLIEiJ_G0026555	Srsf4	51	61.328	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
MGP_CAROLIEiJ_G0026555	Srsf4	67	87.576	ENSGAGG00000014836	SRSF4	93	76.923	Gopherus_agassizii
MGP_CAROLIEiJ_G0026555	Srsf4	92	83.807	ENSGGOG00000002444	SRSF4	93	82.468	Gorilla_gorilla
MGP_CAROLIEiJ_G0026555	Srsf4	92	85.621	ENSSTOG00000015908	SRSF4	93	85.621	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026555	Srsf4	92	71.490	ENSJJAG00000022153	Srsf4	93	73.491	Jaculus_jaculus
MGP_CAROLIEiJ_G0026555	Srsf4	89	81.250	ENSLAFG00000002575	SRSF4	89	83.223	Loxodonta_africana
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSMFAG00000041784	SRSF4	93	82.684	Macaca_fascicularis
MGP_CAROLIEiJ_G0026555	Srsf4	85	82.701	ENSMMUG00000007110	SRSF4	72	100.000	Macaca_mulatta
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSMNEG00000034931	SRSF4	93	82.684	Macaca_nemestrina
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.245	ENSMLEG00000031619	SRSF4	93	82.900	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026555	Srsf4	92	73.009	ENSMGAG00000002400	SRSF4	92	70.769	Meleagris_gallopavo
MGP_CAROLIEiJ_G0026555	Srsf4	92	93.846	ENSMAUG00000021940	Srsf4	92	92.527	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026555	Srsf4	92	85.683	ENSMICG00000043567	SRSF4	93	87.013	Microcebus_murinus
MGP_CAROLIEiJ_G0026555	Srsf4	92	91.685	ENSMOCG00000013319	Srsf4	92	91.904	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026555	Srsf4	53	65.530	ENSMMOG00000013653	srsf4	99	85.507	Mola_mola
MGP_CAROLIEiJ_G0026555	Srsf4	61	93.023	ENSMODG00000011052	SRSF4	93	93.023	Monodelphis_domestica
MGP_CAROLIEiJ_G0026555	Srsf4	100	99.593	ENSMUSG00000028911	Srsf4	100	99.593	Mus_musculus
MGP_CAROLIEiJ_G0026555	Srsf4	92	93.187	MGP_PahariEiJ_G0028887	Srsf4	92	93.682	Mus_pahari
MGP_CAROLIEiJ_G0026555	Srsf4	100	99.391	MGP_SPRETEiJ_G0027535	Srsf4	100	99.391	Mus_spretus
MGP_CAROLIEiJ_G0026555	Srsf4	67	91.617	ENSMPUG00000015470	SRSF4	93	82.581	Mustela_putorius_furo
MGP_CAROLIEiJ_G0026555	Srsf4	67	90.274	ENSMLUG00000014770	SRSF4	92	82.112	Myotis_lucifugus
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.211	ENSNGAG00000012225	Srsf4	93	83.696	Nannospalax_galili
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.245	ENSNLEG00000009916	SRSF4	93	83.117	Nomascus_leucogenys
MGP_CAROLIEiJ_G0026555	Srsf4	61	100.000	ENSMEUG00000003045	-	69	100.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0026555	Srsf4	92	77.802	ENSOPRG00000010098	SRSF4	93	77.681	Ochotona_princeps
MGP_CAROLIEiJ_G0026555	Srsf4	68	86.567	ENSODEG00000003230	SRSF4	93	81.545	Octodon_degus
MGP_CAROLIEiJ_G0026555	Srsf4	67	90.746	ENSOCUG00000001837	SRSF4	93	80.172	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.902	ENSOGAG00000015515	SRSF4	92	80.652	Otolemur_garnettii
MGP_CAROLIEiJ_G0026555	Srsf4	92	83.807	ENSPPAG00000028357	SRSF4	93	82.468	Pan_paniscus
MGP_CAROLIEiJ_G0026555	Srsf4	66	92.615	ENSPPRG00000016248	SRSF4	92	80.870	Panthera_pardus
MGP_CAROLIEiJ_G0026555	Srsf4	92	83.807	ENSPTRG00000000445	SRSF4	93	82.468	Pan_troglodytes
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.245	ENSPANG00000021937	SRSF4	93	82.900	Papio_anubis
MGP_CAROLIEiJ_G0026555	Srsf4	88	80.556	ENSPEMG00000003365	Srsf4	92	91.924	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.245	ENSPPYG00000001629	SRSF4	93	82.900	Pongo_abelii
MGP_CAROLIEiJ_G0026555	Srsf4	92	78.696	ENSPCAG00000009879	SRSF4	93	81.385	Procavia_capensis
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.464	ENSPCOG00000027341	SRSF4	92	83.043	Propithecus_coquereli
MGP_CAROLIEiJ_G0026555	Srsf4	77	73.554	ENSPVAG00000012500	SRSF4	78	73.554	Pteropus_vampyrus
MGP_CAROLIEiJ_G0026555	Srsf4	92	93.407	ENSRNOG00000010007	Srsf4	92	95.186	Rattus_norvegicus
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSRBIG00000035789	SRSF4	93	82.684	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.026	ENSRROG00000029463	SRSF4	93	82.684	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026555	Srsf4	92	84.017	ENSSBOG00000027098	SRSF4	93	85.345	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026555	Srsf4	57	90.323	ENSSHAG00000012407	SRSF4	94	91.176	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026555	Srsf4	65	83.851	ENSSPUG00000015318	-	92	73.348	Sphenodon_punctatus
MGP_CAROLIEiJ_G0026555	Srsf4	53	71.970	ENSSPAG00000014538	srsf4	88	85.507	Stegastes_partitus
MGP_CAROLIEiJ_G0026555	Srsf4	96	76.681	ENSSSCG00000003589	SRSF4	94	81.917	Sus_scrofa
MGP_CAROLIEiJ_G0026555	Srsf4	85	73.684	ENSTGUG00000000765	SRSF4	92	66.905	Taeniopygia_guttata
MGP_CAROLIEiJ_G0026555	Srsf4	92	81.319	ENSTTRG00000002572	SRSF4	92	81.602	Tursiops_truncatus
MGP_CAROLIEiJ_G0026555	Srsf4	92	85.217	ENSUAMG00000006106	SRSF4	93	83.297	Ursus_americanus
MGP_CAROLIEiJ_G0026555	Srsf4	89	80.761	ENSVVUG00000012690	SRSF4	90	81.628	Vulpes_vulpes