EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026604 (Gene tree)
Gene ID: -
Gene Symbol: Zfp683
Alias: Hobit
Full Name: zinc finger protein 683
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5144 bases
Position: chr4:123704964-123710107
Accession: 3650254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0065010	zf-C2H2	PF00096.26	1.5e-16	1	3
MGP_CAROLIEiJ_P0065010	zf-C2H2	PF00096.26	1.5e-16	2	3
MGP_CAROLIEiJ_P0065010	zf-C2H2	PF00096.26	1.5e-16	3	3
MGP_CAROLIEiJ_P0065010	zf-met	PF12874.7	2.2e-07	1	2
MGP_CAROLIEiJ_P0065010	zf-met	PF12874.7	2.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0065010	-	1496	-	MGP_CAROLIEiJ_P0065010	459 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0026604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0026604	Zfp683	51	44.706	MGP_CAROLIEiJ_G0028343	Repin1	86	45.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026604	Zfp683	98	55.292	ENSBTAG00000009631	ZNF683	96	56.034	Bos_taurus
MGP_CAROLIEiJ_G0026604	Zfp683	94	53.061	ENSCAFG00000012496	ZNF683	92	53.043	Canis_familiaris
MGP_CAROLIEiJ_G0026604	Zfp683	94	53.515	ENSCAFG00020021402	-	95	53.696	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026604	Zfp683	99	53.992	ENSCHIG00000023542	-	97	54.812	Capra_hircus
MGP_CAROLIEiJ_G0026604	Zfp683	97	65.410	ENSMAUG00000020451	Zfp683	99	66.075	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026604	Zfp683	99	67.521	ENSMOCG00000019164	Zfp683	100	67.521	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026604	Zfp683	79	37.203	ENSMODG00000028134	-	85	37.469	Monodelphis_domestica
MGP_CAROLIEiJ_G0026604	Zfp683	100	95.643	ENSMUSG00000049410	Zfp683	100	95.643	Mus_musculus
MGP_CAROLIEiJ_G0026604	Zfp683	100	88.235	MGP_PahariEiJ_G0028937	Zfp683	100	88.235	Mus_pahari
MGP_CAROLIEiJ_G0026604	Zfp683	100	94.553	MGP_SPRETEiJ_G0027584	Zfp683	100	94.553	Mus_spretus
MGP_CAROLIEiJ_G0026604	Zfp683	99	59.913	ENSNGAG00000000967	Zfp683	99	59.913	Nannospalax_galili
MGP_CAROLIEiJ_G0026604	Zfp683	93	54.713	ENSOARG00000004628	-	97	55.606	Ovis_aries
MGP_CAROLIEiJ_G0026604	Zfp683	52	48.708	ENSPMGG00000023001	-	61	50.000	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026604	Zfp683	99	69.762	ENSPEMG00000015866	Zfp683	99	70.410	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026604	Zfp683	94	53.515	ENSVVUG00000011915	-	82	53.696	Vulpes_vulpes