EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0026633 (Gene tree)
Gene ID
110292866
Gene Symbol
Syf2
Alias
1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29
Full Name
SYF2 pre-mRNA splicing factor
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
7987 bases
Position
chr4:124591035-124599021
Accession
110292866
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0065130SYF2PF08231.127.5e-5511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0065132-892--- (aa)--
MGP_CAROLIEiJ_T0065131-822--- (aa)--
MGP_CAROLIEiJ_T0065130-1372XM_021160501MGP_CAROLIEiJ_P0065130242 (aa)XP_021016160UPI0000029A9D
Gene Model
Click here to download MGP_CAROLIEiJ_G0026633's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026633's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0026633Syf210090.535ENSG00000117614SYF210090.947Homo_sapiens
MGP_CAROLIEiJ_G0026633Syf29285.586ENSAPOG00000001174syf210080.992Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026633Syf28194.872ENSAMEG00000010134-10094.872Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026633Syf29791.983ENSAMEG00000010115-9891.983Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026633Syf29680.258ENSACIG00000023688syf29280.258Amphilophus_citrinellus
MGP_CAROLIEiJ_G0026633Syf210081.818ENSAOCG00000022046syf29486.036Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026633Syf29380.444ENSAOCG00000010912syf26980.444Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026633Syf210081.818ENSAPEG00000018858syf29281.818Amphiprion_percula
MGP_CAROLIEiJ_G0026633Syf29084.793ENSATEG00000007745syf210079.339Anabas_testudineus
MGP_CAROLIEiJ_G0026633Syf28387.500ENSAPLG00000016435SYF29987.500Anas_platyrhynchos
MGP_CAROLIEiJ_G0026633Syf26976.048ENSACAG00000026777-9476.433Anolis_carolinensis
MGP_CAROLIEiJ_G0026633Syf28484.804ENSACAG00000013653-10084.804Anolis_carolinensis
MGP_CAROLIEiJ_G0026633Syf210091.358ENSANAG00000032473SYF210091.358Aotus_nancymaae
MGP_CAROLIEiJ_G0026633Syf29281.982ENSACLG00000019916syf210078.099Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026633Syf210079.752ENSAMXG00000004051syf210079.752Astyanax_mexicanus
MGP_CAROLIEiJ_G0026633Syf210091.429ENSBTAG00000001651SYF210093.220Bos_taurus
MGP_CAROLIEiJ_G0026633Syf28650.952WBGene00019402syf-29050.711Caenorhabditis_elegans
MGP_CAROLIEiJ_G0026633Syf210090.123ENSCJAG00000046570SYF210091.358Callithrix_jacchus
MGP_CAROLIEiJ_G0026633Syf29783.761ENSCAFG00000030331-9683.761Canis_familiaris
MGP_CAROLIEiJ_G0026633Syf29989.344ENSCAFG00000012895-9989.344Canis_familiaris
MGP_CAROLIEiJ_G0026633Syf27585.165ENSCAFG00020021094-8392.949Canis_lupus_dingo
MGP_CAROLIEiJ_G0026633Syf29989.344ENSCAFG00020021091-9989.344Canis_lupus_dingo
MGP_CAROLIEiJ_G0026633Syf29991.701ENSCHIG00000020874SYF29893.220Capra_hircus
MGP_CAROLIEiJ_G0026633Syf210091.770ENSTSYG00000005114SYF210091.770Carlito_syrichta
MGP_CAROLIEiJ_G0026633Syf28295.455ENSCAPG00000010006SYF210095.455Cavia_aperea
MGP_CAROLIEiJ_G0026633Syf210090.164ENSCPOG00000005326SYF210090.164Cavia_porcellus
MGP_CAROLIEiJ_G0026633Syf210091.770ENSCCAG00000022459SYF210091.770Cebus_capucinus
MGP_CAROLIEiJ_G0026633Syf210090.535ENSCATG00000026917SYF210090.535Cercocebus_atys
MGP_CAROLIEiJ_G0026633Syf210093.033ENSCLAG00000008474SYF210093.033Chinchilla_lanigera
MGP_CAROLIEiJ_G0026633Syf210090.574ENSCSAG00000000948SYF210090.574Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026633Syf26977.381ENSCHOG00000005273-9277.381Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026633Syf29388.000ENSCPBG00000025073SYF29287.281Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026633Syf28753.521ENSCING00000003017-8953.521Ciona_intestinalis
MGP_CAROLIEiJ_G0026633Syf28750.704ENSCSAVG00000006627-9750.704Ciona_savignyi
MGP_CAROLIEiJ_G0026633Syf210078.601ENSCANG00000037322SYF210078.601Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026633Syf210095.868ENSCGRG00001020733Syf210095.868Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026633Syf28298.492ENSCGRG00000005095Syf29698.492Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026633Syf29079.817ENSCSEG00000000117syf29378.829Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026633Syf29183.258ENSCVAG00000019543syf210078.926Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026633Syf210079.752ENSDARG00000004706syf210079.752Danio_rerio
MGP_CAROLIEiJ_G0026633Syf210090.612ENSDNOG00000047605SYF210090.612Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026633Syf210091.803ENSDORG00000001274Syf210091.803Dipodomys_ordii
MGP_CAROLIEiJ_G0026633Syf29056.818FBgn0033556CG123439756.818Drosophila_melanogaster
MGP_CAROLIEiJ_G0026633Syf29177.828ENSETEG00000015729SYF210076.419Echinops_telfairi
MGP_CAROLIEiJ_G0026633Syf28160.406ENSEBUG00000015402syf29560.406Eptatretus_burgeri
MGP_CAROLIEiJ_G0026633Syf210081.070ENSEASG00005004232-10081.070Equus_asinus_asinus
MGP_CAROLIEiJ_G0026633Syf210091.020ENSEASG00005004224-10091.020Equus_asinus_asinus
MGP_CAROLIEiJ_G0026633Syf210091.837ENSECAG00000012023-10091.837Equus_caballus
MGP_CAROLIEiJ_G0026633Syf29693.617ENSECAG00000010440-9893.617Equus_caballus
MGP_CAROLIEiJ_G0026633Syf27579.781ENSEEUG00000015084SYF210079.781Erinaceus_europaeus
MGP_CAROLIEiJ_G0026633Syf210081.070ENSELUG00000003465syf29981.070Esox_lucius
MGP_CAROLIEiJ_G0026633Syf29991.393ENSFCAG00000043095-9991.393Felis_catus
MGP_CAROLIEiJ_G0026633Syf210091.837ENSFCAG00000010324-8591.837Felis_catus
MGP_CAROLIEiJ_G0026633Syf28485.294ENSFALG00000000460SYF29381.545Ficedula_albicollis
MGP_CAROLIEiJ_G0026633Syf210091.358ENSFDAG00000008310SYF210091.358Fukomys_damarensis
MGP_CAROLIEiJ_G0026633Syf29268.304ENSFHEG00000007238syf29968.304Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026633Syf29085.321ENSGMOG00000019138syf29686.512Gadus_morhua
MGP_CAROLIEiJ_G0026633Syf29487.225ENSGALG00000013639SYF29087.281Gallus_gallus
MGP_CAROLIEiJ_G0026633Syf210076.446ENSGAFG00000019435syf210076.446Gambusia_affinis
MGP_CAROLIEiJ_G0026633Syf28985.116ENSGACG00000007305syf29085.116Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026633Syf29388.444ENSGAGG00000010670SYF29287.719Gopherus_agassizii
MGP_CAROLIEiJ_G0026633Syf210090.947ENSGGOG00000012796SYF210091.358Gorilla_gorilla
MGP_CAROLIEiJ_G0026633Syf29680.258ENSHBUG00000020477syf29980.258Haplochromis_burtoni
MGP_CAROLIEiJ_G0026633Syf29282.063ENSHGLG00000004304-10075.620Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026633Syf210090.574ENSHGLG00000014393SYF210090.574Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026633Syf210090.574ENSHGLG00100014722SYF210090.574Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026633Syf29878.423ENSHCOG00000012904syf27778.423Hippocampus_comes
MGP_CAROLIEiJ_G0026633Syf210081.070ENSIPUG00000019859syf210081.070Ictalurus_punctatus
MGP_CAROLIEiJ_G0026633Syf26093.836ENSSTOG00000023984SYF210093.836Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026633Syf28296.985ENSJJAG00000013301Syf29496.985Jaculus_jaculus
MGP_CAROLIEiJ_G0026633Syf29282.432ENSKMAG00000013856syf29482.432Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026633Syf29084.932ENSLBEG00000014425syf210079.339Labrus_bergylta
MGP_CAROLIEiJ_G0026633Syf29086.239ENSLACG00000012064SYF29286.239Latimeria_chalumnae
MGP_CAROLIEiJ_G0026633Syf210081.405ENSLOCG00000002728syf29581.405Lepisosteus_oculatus
MGP_CAROLIEiJ_G0026633Syf210091.020ENSLAFG00000023150-10091.020Loxodonta_africana
MGP_CAROLIEiJ_G0026633Syf27663.043ENSLAFG00000030814-10063.043Loxodonta_africana
MGP_CAROLIEiJ_G0026633Syf210090.947ENSMFAG00000041831SYF210090.947Macaca_fascicularis
MGP_CAROLIEiJ_G0026633Syf210090.535ENSMMUG00000002968SYF210090.947Macaca_mulatta
MGP_CAROLIEiJ_G0026633Syf210090.947ENSMNEG00000030180SYF210090.947Macaca_nemestrina
MGP_CAROLIEiJ_G0026633Syf210090.535ENSMLEG00000030248SYF210090.535Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026633Syf29083.410ENSMAMG00000010403syf29878.099Mastacembelus_armatus
MGP_CAROLIEiJ_G0026633Syf210078.099ENSMZEG00005006429syf210078.099Maylandia_zebra
MGP_CAROLIEiJ_G0026633Syf28287.940ENSMGAG00000002019SYF210087.940Meleagris_gallopavo
MGP_CAROLIEiJ_G0026633Syf210097.521ENSMAUG00000018974Syf210097.521Mesocricetus_auratus
MGP_CAROLIEiJ_G0026633Syf28296.482ENSMICG00000016191SYF210096.482Microcebus_murinus
MGP_CAROLIEiJ_G0026633Syf210097.521ENSMOCG00000022938Syf210097.521Microtus_ochrogaster
MGP_CAROLIEiJ_G0026633Syf29678.541ENSMMOG00000002396syf29778.541Mola_mola
MGP_CAROLIEiJ_G0026633Syf29387.773ENSMODG00000013951-10087.773Monodelphis_domestica
MGP_CAROLIEiJ_G0026633Syf210078.189ENSMALG00000010706syf210078.189Monopterus_albus
MGP_CAROLIEiJ_G0026633Syf2100100.000ENSMUSG00000028821Syf2100100.000Mus_musculus
MGP_CAROLIEiJ_G0026633Syf2100100.000MGP_PahariEiJ_G0028966Syf2100100.000Mus_pahari
MGP_CAROLIEiJ_G0026633Syf2100100.000MGP_SPRETEiJ_G0027613Syf2100100.000Mus_spretus
MGP_CAROLIEiJ_G0026633Syf210089.837ENSMPUG00000015801-10089.837Mustela_putorius_furo
MGP_CAROLIEiJ_G0026633Syf29990.164ENSMPUG00000015802-9990.984Mustela_putorius_furo
MGP_CAROLIEiJ_G0026633Syf29989.583ENSMLUG00000001885SYF29889.583Myotis_lucifugus
MGP_CAROLIEiJ_G0026633Syf210093.496ENSNGAG00000007912Syf210093.496Nannospalax_galili
MGP_CAROLIEiJ_G0026633Syf210070.732ENSNBRG00000010720syf210071.130Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026633Syf210091.358ENSNLEG00000035185SYF210091.770Nomascus_leucogenys
MGP_CAROLIEiJ_G0026633Syf210092.181ENSOPRG00000012870SYF210092.181Ochotona_princeps
MGP_CAROLIEiJ_G0026633Syf29891.102ENSODEG00000017664-9891.102Octodon_degus
MGP_CAROLIEiJ_G0026633Syf210079.918ENSODEG00000014338-9981.013Octodon_degus
MGP_CAROLIEiJ_G0026633Syf29281.982ENSONIG00000008213syf210078.099Oreochromis_niloticus
MGP_CAROLIEiJ_G0026633Syf28390.099ENSOANG00000009552SYF210090.099Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0026633Syf210092.623ENSOCUG00000013050SYF210093.033Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026633Syf29282.432ENSORLG00000028820syf29582.432Oryzias_latipes
MGP_CAROLIEiJ_G0026633Syf29282.432ENSORLG00020018333syf29482.432Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026633Syf29083.486ENSORLG00015014665syf29283.486Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026633Syf29283.333ENSOMEG00000013911syf29383.333Oryzias_melastigma
MGP_CAROLIEiJ_G0026633Syf210093.033ENSOGAG00000009962SYF210093.033Otolemur_garnettii
MGP_CAROLIEiJ_G0026633Syf29991.837ENSOARG00000006348-9991.837Ovis_aries
MGP_CAROLIEiJ_G0026633Syf28165.128ENSOARG00000006269-10065.128Ovis_aries
MGP_CAROLIEiJ_G0026633Syf210090.947ENSPPAG00000036579SYF210091.358Pan_paniscus
MGP_CAROLIEiJ_G0026633Syf29990.574ENSPPRG00000001638-9990.574Panthera_pardus
MGP_CAROLIEiJ_G0026633Syf29991.393ENSPPRG00000001651-9991.393Panthera_pardus
MGP_CAROLIEiJ_G0026633Syf29991.393ENSPTIG00000007036-9991.393Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026633Syf28996.296ENSPTIG00000005711-8195.067Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026633Syf210090.947ENSPTRG00000000352SYF210091.358Pan_troglodytes
MGP_CAROLIEiJ_G0026633Syf210090.947ENSPANG00000008139SYF210090.947Papio_anubis
MGP_CAROLIEiJ_G0026633Syf29680.342ENSPKIG00000008130syf29980.342Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026633Syf29486.404ENSPSIG00000011816SYF28986.404Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026633Syf29282.511ENSPMGG00000008755syf28782.511Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026633Syf210097.521ENSPEMG00000008283Syf210097.521Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026633Syf29291.928ENSPCIG00000014235SYF29291.266Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026633Syf210076.033ENSPFOG00000004116syf210076.033Poecilia_formosa
MGP_CAROLIEiJ_G0026633Syf29678.541ENSPLAG00000006691syf29978.541Poecilia_latipinna
MGP_CAROLIEiJ_G0026633Syf29974.689ENSPMEG00000011684syf29974.689Poecilia_mexicana
MGP_CAROLIEiJ_G0026633Syf28982.870ENSPREG00000003009syf210076.446Poecilia_reticulata
MGP_CAROLIEiJ_G0026633Syf210091.770ENSPPYG00000001713SYF210091.770Pongo_abelii
MGP_CAROLIEiJ_G0026633Syf210063.374ENSPCOG00000027011SYF210062.963Propithecus_coquereli
MGP_CAROLIEiJ_G0026633Syf210079.012ENSPVAG00000005841SYF29979.012Pteropus_vampyrus
MGP_CAROLIEiJ_G0026633Syf29281.982ENSPNYG00000004979syf210078.099Pundamilia_nyererei
MGP_CAROLIEiJ_G0026633Syf210081.818ENSPNAG00000015570syf210081.818Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026633Syf2100100.000ENSRNOG00000060597Syf2100100.000Rattus_norvegicus
MGP_CAROLIEiJ_G0026633Syf210089.300ENSRBIG00000042970SYF210089.300Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026633Syf210090.947ENSRROG00000001347SYF210090.947Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026633Syf210091.358ENSSBOG00000020184SYF210091.358Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026633Syf29390.749ENSSHAG00000015630-9190.749Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026633Syf28591.262ENSSHAG00000007152-10091.262Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026633Syf210080.247ENSSFOG00015023647syf210080.247Scleropages_formosus
MGP_CAROLIEiJ_G0026633Syf210076.860ENSSMAG00000009867syf210076.860Scophthalmus_maximus
MGP_CAROLIEiJ_G0026633Syf29084.404ENSSDUG00000013072syf210078.099Seriola_dumerili
MGP_CAROLIEiJ_G0026633Syf29084.404ENSSLDG00000012677syf210078.099Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026633Syf210072.951ENSSARG00000012889SYF210072.951Sorex_araneus
MGP_CAROLIEiJ_G0026633Syf29287.892ENSSPUG00000005251SYF28887.892Sphenodon_punctatus
MGP_CAROLIEiJ_G0026633Syf210078.926ENSSPAG00000009626syf210078.926Stegastes_partitus
MGP_CAROLIEiJ_G0026633Syf210091.837ENSSSCG00000037481SYF210091.837Sus_scrofa
MGP_CAROLIEiJ_G0026633Syf26259.603ENSTGUG00000001126SYF28659.302Taeniopygia_guttata
MGP_CAROLIEiJ_G0026633Syf210076.446ENSTRUG00000001499syf28981.532Takifugu_rubripes
MGP_CAROLIEiJ_G0026633Syf29280.269ENSTNIG00000016912syf210080.269Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026633Syf210070.370ENSTBEG00000017370SYF29969.959Tupaia_belangeri
MGP_CAROLIEiJ_G0026633Syf210091.803ENSTTRG00000003550SYF210091.803Tursiops_truncatus
MGP_CAROLIEiJ_G0026633Syf29989.754ENSUAMG00000002897SYF29989.754Ursus_americanus
MGP_CAROLIEiJ_G0026633Syf29988.934ENSUMAG00000013108SYF29990.164Ursus_maritimus
MGP_CAROLIEiJ_G0026633Syf210091.393ENSVPAG00000005705SYF210091.393Vicugna_pacos
MGP_CAROLIEiJ_G0026633Syf210087.500ENSVVUG00000027181-10087.500Vulpes_vulpes
MGP_CAROLIEiJ_G0026633Syf29989.344ENSVVUG00000027175-9989.344Vulpes_vulpes
MGP_CAROLIEiJ_G0026633Syf29881.092ENSXETG00000022797syf29681.092Xenopus_tropicalis
MGP_CAROLIEiJ_G0026633Syf28982.791ENSXMAG00000022698syf210076.033Xiphophorus_maculatus

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