EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026672 (Gene tree)
Gene ID: 110293513
Gene Symbol: Zbtb40
Alias: -
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 70025 bases
Position: chr4:126664183-126734207
Accession: 2682254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0065293	zf-C2H2	PF00096.26	4.4e-34	1	4
MGP_CAROLIEiJ_P0065293	zf-C2H2	PF00096.26	4.4e-34	2	4
MGP_CAROLIEiJ_P0065293	zf-C2H2	PF00096.26	4.4e-34	3	4
MGP_CAROLIEiJ_P0065293	zf-C2H2	PF00096.26	4.4e-34	4	4
MGP_CAROLIEiJ_P0065293	zf-met	PF12874.7	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0065294	-	4421	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065292	-	7283	-	MGP_CAROLIEiJ_P0065292	1257 (aa)	-	-
MGP_CAROLIEiJ_T0065293	-	7176	-	MGP_CAROLIEiJ_P0065293	1258 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0026672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.948	ENSG00000184677	ZBTB40	100	77.948	Homo_sapiens
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.596	ENSAMEG00000014635	ZBTB40	100	76.596	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026672	Zbtb40	100	93.443	ENSANAG00000010550	ZBTB40	100	77.863	Aotus_nancymaae
MGP_CAROLIEiJ_G0026672	Zbtb40	100	74.921	ENSBTAG00000016448	ZBTB40	100	74.921	Bos_taurus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.535	ENSCJAG00000005869	ZBTB40	100	77.535	Callithrix_jacchus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.063	ENSCAFG00000014644	ZBTB40	100	76.063	Canis_familiaris
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.554	ENSCAFG00020019562	ZBTB40	100	76.554	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026672	Zbtb40	100	74.510	ENSCHIG00000007943	ZBTB40	100	74.510	Capra_hircus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.009	ENSTSYG00000000979	ZBTB40	100	76.009	Carlito_syrichta
MGP_CAROLIEiJ_G0026672	Zbtb40	100	75.054	ENSCAPG00000009177	ZBTB40	78	75.054	Cavia_aperea
MGP_CAROLIEiJ_G0026672	Zbtb40	100	75.493	ENSCPOG00000012844	ZBTB40	100	75.493	Cavia_porcellus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.208	ENSCCAG00000021093	ZBTB40	100	77.208	Cebus_capucinus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.948	ENSCATG00000031739	ZBTB40	100	77.948	Cercocebus_atys
MGP_CAROLIEiJ_G0026672	Zbtb40	100	79.138	ENSCLAG00000015032	ZBTB40	100	79.138	Chinchilla_lanigera
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.918	ENSCSAG00000000911	ZBTB40	100	77.918	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	94.253	ENSCHOG00000011197	ZBTB40	93	94.253	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.838	ENSCANG00000038636	ZBTB40	100	77.838	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	84.646	ENSCGRG00001016016	Zbtb40	100	84.646	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026672	Zbtb40	100	84.658	ENSCGRG00000008459	Zbtb40	100	84.658	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026672	Zbtb40	91	51.572	ENSDARG00000091762	zbtb40	99	51.572	Danio_rerio
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.305	ENSDNOG00000006200	ZBTB40	100	77.305	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.535	ENSDORG00000016495	Zbtb40	100	77.535	Dipodomys_ordii
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.019	ENSEASG00005007270	ZBTB40	100	76.019	Equus_asinus_asinus
MGP_CAROLIEiJ_G0026672	Zbtb40	99	91.152	ENSECAG00000016319	ZBTB40	99	75.311	Equus_caballus
MGP_CAROLIEiJ_G0026672	Zbtb40	83	71.754	ENSEEUG00000001708	ZBTB40	100	71.754	Erinaceus_europaeus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.099	ENSFCAG00000028182	ZBTB40	100	77.099	Felis_catus
MGP_CAROLIEiJ_G0026672	Zbtb40	98	72.707	ENSFDAG00000003410	ZBTB40	100	72.707	Fukomys_damarensis
MGP_CAROLIEiJ_G0026672	Zbtb40	100	78.057	ENSGGOG00000010010	ZBTB40	100	78.057	Gorilla_gorilla
MGP_CAROLIEiJ_G0026672	Zbtb40	100	92.745	ENSHGLG00000016950	ZBTB40	95	67.418	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026672	Zbtb40	100	92.745	ENSHGLG00100008314	ZBTB40	95	67.418	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.069	ENSSTOG00000009598	ZBTB40	100	77.069	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	78.157	ENSJJAG00000018013	Zbtb40	100	78.475	Jaculus_jaculus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	78.810	ENSLAFG00000006483	ZBTB40	100	78.810	Loxodonta_africana
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.760	ENSMFAG00000043032	ZBTB40	100	77.760	Macaca_fascicularis
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.760	ENSMMUG00000018618	ZBTB40	100	77.760	Macaca_mulatta
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.729	ENSMNEG00000032628	ZBTB40	100	77.729	Macaca_nemestrina
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.839	ENSMLEG00000027910	ZBTB40	100	77.839	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	84.658	ENSMAUG00000010466	Zbtb40	100	84.658	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	80.952	ENSMICG00000007464	ZBTB40	100	80.952	Microcebus_murinus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	86.577	ENSMOCG00000013259	Zbtb40	100	86.577	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026672	Zbtb40	100	97.774	ENSMUSG00000060862	Zbtb40	99	100.000	Mus_musculus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	95.390	MGP_PahariEiJ_G0029005	Zbtb40	100	95.390	Mus_pahari
MGP_CAROLIEiJ_G0026672	Zbtb40	100	98.092	MGP_SPRETEiJ_G0027652	Zbtb40	100	98.092	Mus_spretus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	74.941	ENSMPUG00000015961	ZBTB40	100	74.941	Mustela_putorius_furo
MGP_CAROLIEiJ_G0026672	Zbtb40	100	81.096	ENSNGAG00000019354	Zbtb40	100	81.096	Nannospalax_galili
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.620	ENSNLEG00000008268	ZBTB40	100	77.620	Nomascus_leucogenys
MGP_CAROLIEiJ_G0026672	Zbtb40	95	76.515	ENSOPRG00000003103	ZBTB40	95	76.515	Ochotona_princeps
MGP_CAROLIEiJ_G0026672	Zbtb40	100	78.819	ENSOGAG00000004797	ZBTB40	100	78.819	Otolemur_garnettii
MGP_CAROLIEiJ_G0026672	Zbtb40	100	74.705	ENSOARG00000008054	ZBTB40	100	74.705	Ovis_aries
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.729	ENSPPAG00000034112	ZBTB40	100	77.729	Pan_paniscus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.663	ENSPPRG00000021468	ZBTB40	100	76.663	Panthera_pardus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.663	ENSPTIG00000010874	ZBTB40	100	76.663	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.729	ENSPTRG00000000315	ZBTB40	100	77.729	Pan_troglodytes
MGP_CAROLIEiJ_G0026672	Zbtb40	100	80.159	ENSPANG00000018749	ZBTB40	100	80.159	Papio_anubis
MGP_CAROLIEiJ_G0026672	Zbtb40	100	85.624	ENSPEMG00000009389	Zbtb40	100	85.624	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026672	Zbtb40	100	64.521	ENSPCIG00000026425	ZBTB40	100	64.757	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.681	ENSPPYG00000001752	ZBTB40	100	77.681	Pongo_abelii
MGP_CAROLIEiJ_G0026672	Zbtb40	100	96.000	ENSPCOG00000006905	ZBTB40	93	96.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0026672	Zbtb40	100	90.692	ENSRNOG00000022039	Zbtb40	100	90.692	Rattus_norvegicus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.948	ENSRBIG00000034608	ZBTB40	100	77.948	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.838	ENSRROG00000034514	ZBTB40	100	77.838	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026672	Zbtb40	100	77.208	ENSSBOG00000027235	ZBTB40	100	77.208	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.118	ENSUAMG00000020372	ZBTB40	100	76.118	Ursus_americanus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.554	ENSUMAG00000013539	ZBTB40	100	76.485	Ursus_maritimus
MGP_CAROLIEiJ_G0026672	Zbtb40	100	76.772	ENSVVUG00000025752	ZBTB40	100	76.772	Vulpes_vulpes