EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026744 (Gene tree)
Gene ID: 110292743
Gene Symbol: Zbtb17
Alias: Miz1|Zfp100|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 23164 bases
Position: chr4:131128898-131152061
Accession: 110292743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	1	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	2	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	3	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	4	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	5	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	6	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	7	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	8	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	9	10
MGP_CAROLIEiJ_P0065589	zf-C2H2	PF00096.26	2.7e-60	10	10
MGP_CAROLIEiJ_P0065589	zf-met	PF12874.7	2.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0065591	-	2971	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065590	-	3508	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065593	-	785	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065592	-	340	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065595	-	867	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065594	-	771	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0065589	-	2723	XM_021160276	MGP_CAROLIEiJ_P0065589	794 (aa)	XP_021015935	UPI000A316ACF

Gene Model

Click here to download MGP_CAROLIEiJ_G0026744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0026744	Zbtb17	59	37.329	MGP_CAROLIEiJ_G0016391	Zfp672	100	40.580
MGP_CAROLIEiJ_G0026744	Zbtb17	67	41.772	MGP_CAROLIEiJ_G0022445	Zfp236	67	41.772
MGP_CAROLIEiJ_G0026744	Zbtb17	62	42.949	MGP_CAROLIEiJ_G0029322	Zfp235	71	44.248
MGP_CAROLIEiJ_G0026744	Zbtb17	69	44.118	MGP_CAROLIEiJ_G0029490	Zfp420	97	44.118
MGP_CAROLIEiJ_G0026744	Zbtb17	74	44.444	MGP_CAROLIEiJ_G0016622	Bcl6b	68	45.312
MGP_CAROLIEiJ_G0026744	Zbtb17	60	42.606	MGP_CAROLIEiJ_G0021128	Zfp51	82	42.606
MGP_CAROLIEiJ_G0026744	Zbtb17	59	32.021	MGP_CAROLIEiJ_G0029356	Zfp574	74	38.532
MGP_CAROLIEiJ_G0026744	Zbtb17	56	46.296	MGP_CAROLIEiJ_G0029143	-	78	35.294
MGP_CAROLIEiJ_G0026744	Zbtb17	58	40.575	MGP_CAROLIEiJ_G0031203	Zfp882	85	39.889
MGP_CAROLIEiJ_G0026744	Zbtb17	87	38.806	MGP_CAROLIEiJ_G0029427	-	88	38.806
MGP_CAROLIEiJ_G0026744	Zbtb17	64	44.086	MGP_CAROLIEiJ_G0029329	Zfp94	76	44.086
MGP_CAROLIEiJ_G0026744	Zbtb17	60	43.333	MGP_CAROLIEiJ_G0029327	Zfp93	72	43.333
MGP_CAROLIEiJ_G0026744	Zbtb17	62	44.058	MGP_CAROLIEiJ_G0029324	Zfp111	76	44.058
MGP_CAROLIEiJ_G0026744	Zbtb17	61	43.939	MGP_CAROLIEiJ_G0029321	Zfp112	57	43.939
MGP_CAROLIEiJ_G0026744	Zbtb17	79	46.354	MGP_CAROLIEiJ_G0024901	Mynn	89	46.354
MGP_CAROLIEiJ_G0026744	Zbtb17	56	44.838	MGP_CAROLIEiJ_G0015655	-	77	45.427
MGP_CAROLIEiJ_G0026744	Zbtb17	57	40.977	MGP_CAROLIEiJ_G0018274	Zkscan4	52	40.977
MGP_CAROLIEiJ_G0026744	Zbtb17	58	42.857	MGP_CAROLIEiJ_G0030498	Zfp768	53	41.441
MGP_CAROLIEiJ_G0026744	Zbtb17	92	34.106	MGP_CAROLIEiJ_G0014667	Zbtb41	55	34.615
MGP_CAROLIEiJ_G0026744	Zbtb17	58	42.606	MGP_CAROLIEiJ_G0029614	Zfp715	64	39.314
MGP_CAROLIEiJ_G0026744	Zbtb17	63	34.819	MGP_CAROLIEiJ_G0031420	Zfp319	91	37.805
MGP_CAROLIEiJ_G0026744	Zbtb17	63	41.250	MGP_CAROLIEiJ_G0028343	Repin1	92	38.614
MGP_CAROLIEiJ_G0026744	Zbtb17	56	42.647	MGP_CAROLIEiJ_G0021132	Zfp948	90	42.647
MGP_CAROLIEiJ_G0026744	Zbtb17	55	42.739	MGP_CAROLIEiJ_G0024261	Zfp661	60	42.683
MGP_CAROLIEiJ_G0026744	Zbtb17	79	32.955	MGP_CAROLIEiJ_G0018933	Zfp131	58	41.284
MGP_CAROLIEiJ_G0026744	Zbtb17	55	46.512	MGP_CAROLIEiJ_G0031579	Zfp1	67	42.083
MGP_CAROLIEiJ_G0026744	Zbtb17	63	41.083	MGP_CAROLIEiJ_G0016437	Zfp867	81	41.083
MGP_CAROLIEiJ_G0026744	Zbtb17	86	45.078	MGP_CAROLIEiJ_G0027176	Zbtb49	62	67.742
MGP_CAROLIEiJ_G0026744	Zbtb17	62	39.672	MGP_CAROLIEiJ_G0016306	Zfp354a	69	43.953
MGP_CAROLIEiJ_G0026744	Zbtb17	56	42.662	MGP_CAROLIEiJ_G0018683	Zfp493	87	42.662
MGP_CAROLIEiJ_G0026744	Zbtb17	58	32.509	MGP_CAROLIEiJ_G0024724	Zfp64	69	32.573
MGP_CAROLIEiJ_G0026744	Zbtb17	56	41.532	MGP_CAROLIEiJ_G0018660	-	60	49.296
MGP_CAROLIEiJ_G0026744	Zbtb17	58	40.841	MGP_CAROLIEiJ_G0018661	Zfp759	87	42.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026744	Zbtb17	69	72.650	ENSACLG00000016405	zbtb17	84	72.650	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026744	Zbtb17	98	95.013	ENSCGRG00001019408	Zbtb17	100	94.969	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026744	Zbtb17	57	75.180	ENSEBUG00000014704	ZBTB17	88	75.180	Eptatretus_burgeri
MGP_CAROLIEiJ_G0026744	Zbtb17	60	78.218	ENSKMAG00000004080	zbtb17	82	76.718	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026744	Zbtb17	98	95.519	ENSMAUG00000001376	Zbtb17	100	95.340	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026744	Zbtb17	98	85.624	ENSMOCG00000005017	Zbtb17	100	89.950	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026744	Zbtb17	80	68.639	ENSMALG00000008493	zbtb17	99	68.639	Monopterus_albus
MGP_CAROLIEiJ_G0026744	Zbtb17	100	99.496	ENSMUSG00000006215	Zbtb17	100	99.496	Mus_musculus
MGP_CAROLIEiJ_G0026744	Zbtb17	100	98.866	MGP_PahariEiJ_G0029075	Zbtb17	100	98.866	Mus_pahari
MGP_CAROLIEiJ_G0026744	Zbtb17	100	99.496	MGP_SPRETEiJ_G0027723	Zbtb17	100	99.496	Mus_spretus
MGP_CAROLIEiJ_G0026744	Zbtb17	100	90.692	ENSMLUG00000025202	ZBTB17	100	90.692	Myotis_lucifugus
MGP_CAROLIEiJ_G0026744	Zbtb17	79	49.113	ENSNBRG00000021960	zbtb17	90	66.412	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026744	Zbtb17	73	79.579	ENSORLG00015022210	zbtb17	78	79.079	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026744	Zbtb17	58	77.874	ENSOMEG00000011926	zbtb17	77	77.874	Oryzias_melastigma
MGP_CAROLIEiJ_G0026744	Zbtb17	98	96.287	ENSPEMG00000021923	Zbtb17	100	95.970	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026744	Zbtb17	59	67.257	ENSPREG00000010261	zbtb17	86	77.605	Poecilia_reticulata
MGP_CAROLIEiJ_G0026744	Zbtb17	98	91.255	ENSPVAG00000013802	ZBTB17	100	91.022	Pteropus_vampyrus
MGP_CAROLIEiJ_G0026744	Zbtb17	78	71.038	ENSPNYG00000012572	zbtb17	74	68.720	Pundamilia_nyererei
MGP_CAROLIEiJ_G0026744	Zbtb17	100	96.504	ENSRNOG00000010436	Zbtb17	100	96.504	Rattus_norvegicus
MGP_CAROLIEiJ_G0026744	Zbtb17	61	78.020	ENSSLDG00000013170	zbtb17	93	71.848	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026744	Zbtb17	77	78.632	ENSTRUG00000003277	zbtb17	98	86.992	Takifugu_rubripes
MGP_CAROLIEiJ_G0026744	Zbtb17	97	62.685	ENSTNIG00000010902	zbtb17	64	74.131	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026744	Zbtb17	76	69.884	ENSTBEG00000005023	-	87	84.177	Tupaia_belangeri