EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0026745 (Gene tree)
Gene ID
110292742
Gene Symbol
Spen
Alias
Mint
Full Name
spen family transcriptional repressor
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
70458 bases
Position
chr4:131152021-131222478
Accession
110292742
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0065597RRM_5PF13893.61.9e-0712
MGP_CAROLIEiJ_P0065597RRM_5PF13893.61.9e-0722
MGP_CAROLIEiJ_P0065596RRM_5PF13893.61.9e-0712
MGP_CAROLIEiJ_P0065596RRM_5PF13893.61.9e-0722
MGP_CAROLIEiJ_P0065597RRM_1PF00076.228.5e-4414
MGP_CAROLIEiJ_P0065597RRM_1PF00076.228.5e-4424
MGP_CAROLIEiJ_P0065597RRM_1PF00076.228.5e-4434
MGP_CAROLIEiJ_P0065597RRM_1PF00076.228.5e-4444
MGP_CAROLIEiJ_P0065596RRM_1PF00076.228.7e-4414
MGP_CAROLIEiJ_P0065596RRM_1PF00076.228.7e-4424
MGP_CAROLIEiJ_P0065596RRM_1PF00076.228.7e-4434
MGP_CAROLIEiJ_P0065596RRM_1PF00076.228.7e-4444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0065601-680--- (aa)--
MGP_CAROLIEiJ_T0065600-433--- (aa)--
MGP_CAROLIEiJ_T0065597-12042XM_021160275MGP_CAROLIEiJ_P00655973611 (aa)XP_021015934UPI000A31589C
MGP_CAROLIEiJ_T0065596-12259XM_021160274MGP_CAROLIEiJ_P00655963634 (aa)XP_021015933UPI000A316446
MGP_CAROLIEiJ_T0065599-1510--- (aa)--
MGP_CAROLIEiJ_T0065598-481--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0026745's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026745's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0026745Spen10080.739ENSG00000065526SPEN9997.643Homo_sapiens
MGP_CAROLIEiJ_G0026745Spen9780.899ENSAPOG00000009853-9174.906Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026745Spen7683.626ENSAPOG00000011411si:ch1073-335m2.27783.626Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026745Spen10079.350ENSAMEG00000011817SPEN10079.236Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026745Spen8780.899ENSAOCG00000014505-8151.027Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026745Spen8083.626ENSAPEG00000013515si:ch1073-335m2.27683.626Amphiprion_percula
MGP_CAROLIEiJ_G0026745Spen8780.899ENSAPEG00000010288-8151.027Amphiprion_percula
MGP_CAROLIEiJ_G0026745Spen7284.615ENSATEG00000007674si:ch1073-335m2.26484.615Anabas_testudineus
MGP_CAROLIEiJ_G0026745Spen8982.022ENSATEG00000005627-8152.085Anabas_testudineus
MGP_CAROLIEiJ_G0026745Spen9766.109ENSAPLG00000012618SPEN9966.071Anas_platyrhynchos
MGP_CAROLIEiJ_G0026745Spen9761.283ENSACAG00000013761SPEN9961.385Anolis_carolinensis
MGP_CAROLIEiJ_G0026745Spen9979.853ENSANAG00000034428SPEN9979.560Aotus_nancymaae
MGP_CAROLIEiJ_G0026745Spen7377.041ENSACLG00000021433si:ch1073-335m2.26477.041Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026745Spen9780.899ENSACLG00000016922-9047.915Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026745Spen8782.123ENSAMXG00000012485spen8949.607Astyanax_mexicanus
MGP_CAROLIEiJ_G0026745Spen10079.078ENSBTAG00000018729SPEN10078.917Bos_taurus
MGP_CAROLIEiJ_G0026745Spen10079.913ENSCJAG00000008527SPEN10079.676Callithrix_jacchus
MGP_CAROLIEiJ_G0026745Spen8877.090ENSCAFG00000016132-9877.205Canis_familiaris
MGP_CAROLIEiJ_G0026745Spen10079.901ENSCHIG00000025070SPEN10079.628Capra_hircus
MGP_CAROLIEiJ_G0026745Spen9278.309ENSTSYG00000036016SPEN9977.942Carlito_syrichta
MGP_CAROLIEiJ_G0026745Spen9977.093ENSCAPG00000013803SPEN10076.995Cavia_aperea
MGP_CAROLIEiJ_G0026745Spen9975.358ENSCPOG00000014036SPEN10075.736Cavia_porcellus
MGP_CAROLIEiJ_G0026745Spen10075.515ENSCCAG00000020258SPEN9977.165Cebus_capucinus
MGP_CAROLIEiJ_G0026745Spen9598.519ENSCATG00000015079SPEN9997.794Cercocebus_atys
MGP_CAROLIEiJ_G0026745Spen9977.519ENSCLAG00000002018SPEN10077.289Chinchilla_lanigera
MGP_CAROLIEiJ_G0026745Spen10081.038ENSCSAG00000000841SPEN10080.657Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026745Spen9979.483ENSCANG00000034547SPEN9979.065Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026745Spen9986.841ENSCGRG00001007725Spen10086.917Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026745Spen9985.892ENSCGRG00000010581Spen10085.829Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026745Spen9783.708ENSCSEG00000003915-9048.439Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026745Spen9744.620ENSCVAG00000016346-9048.074Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026745Spen8762.825ENSCVAG00000009075si:ch1073-335m2.29462.825Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026745Spen8467.742ENSDARG00000074245spen10087.407Danio_rerio
MGP_CAROLIEiJ_G0026745Spen7363.821ENSDARG00000074332si:ch1073-335m2.28163.821Danio_rerio
MGP_CAROLIEiJ_G0026745Spen10078.631ENSDNOG00000041948SPEN10078.473Dasypus_novemcinctus
MGP_CAROLIEiJ_G0026745Spen9976.929ENSDORG00000023909Spen9977.150Dipodomys_ordii
MGP_CAROLIEiJ_G0026745Spen6895.798ENSETEG00000016692-6795.816Echinops_telfairi
MGP_CAROLIEiJ_G0026745Spen9598.519ENSEASG00005015911SPEN9998.519Equus_asinus_asinus
MGP_CAROLIEiJ_G0026745Spen9598.519ENSECAG00000008833SPEN9998.519Equus_caballus
MGP_CAROLIEiJ_G0026745Spen7295.349ENSEEUG00000010255SPEN7695.349Erinaceus_europaeus
MGP_CAROLIEiJ_G0026745Spen7177.436ENSELUG00000007726si:ch1073-335m2.27877.436Esox_lucius
MGP_CAROLIEiJ_G0026745Spen9976.379ENSFDAG00000010212SPEN10076.522Fukomys_damarensis
MGP_CAROLIEiJ_G0026745Spen8582.456ENSFHEG00000004544si:ch1073-335m2.28682.456Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026745Spen6576.119ENSGMOG00000008397-6476.119Gadus_morhua
MGP_CAROLIEiJ_G0026745Spen8080.447ENSGMOG00000008156si:ch1073-335m2.28380.447Gadus_morhua
MGP_CAROLIEiJ_G0026745Spen9744.684ENSGAFG00000015819-9174.157Gambusia_affinis
MGP_CAROLIEiJ_G0026745Spen9746.429ENSGACG00000005341-7058.712Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026745Spen7781.176ENSGACG00000001176si:ch1073-335m2.27381.176Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026745Spen9765.791ENSGAGG00000020785SPEN9965.902Gopherus_agassizii
MGP_CAROLIEiJ_G0026745Spen10080.533ENSGGOG00000012041SPEN10080.043Gorilla_gorilla
MGP_CAROLIEiJ_G0026745Spen9780.899ENSHBUG00000020626-9047.806Haplochromis_burtoni
MGP_CAROLIEiJ_G0026745Spen7577.551ENSHBUG00000023253si:ch1073-335m2.27677.551Haplochromis_burtoni
MGP_CAROLIEiJ_G0026745Spen10076.673ENSHGLG00000019259SPEN10076.519Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026745Spen8978.156ENSHGLG00100019294SPEN9577.991Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026745Spen7567.059ENSHCOG00000006004si:ch1073-335m2.27767.059Hippocampus_comes
MGP_CAROLIEiJ_G0026745Spen9781.667ENSIPUG00000021668spen8780.874Ictalurus_punctatus
MGP_CAROLIEiJ_G0026745Spen6777.841ENSIPUG00000018212si:ch1073-335m2.28277.841Ictalurus_punctatus
MGP_CAROLIEiJ_G0026745Spen9981.193ENSSTOG00000021428SPEN10081.067Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026745Spen10080.459ENSJJAG00000010882Spen10080.246Jaculus_jaculus
MGP_CAROLIEiJ_G0026745Spen9780.337ENSKMAG00000003882-6955.773Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026745Spen6772.000ENSLBEG00000020855si:ch1073-335m2.26972.000Labrus_bergylta
MGP_CAROLIEiJ_G0026745Spen8340.904ENSLBEG00000019129-8840.485Labrus_bergylta
MGP_CAROLIEiJ_G0026745Spen9759.450ENSLACG00000003258SPEN8864.090Latimeria_chalumnae
MGP_CAROLIEiJ_G0026745Spen9978.434ENSLAFG00000004524SPEN10078.204Loxodonta_africana
MGP_CAROLIEiJ_G0026745Spen10080.565ENSMFAG00000041974SPEN10080.483Macaca_fascicularis
MGP_CAROLIEiJ_G0026745Spen10080.630ENSMMUG00000008026SPEN10080.537Macaca_mulatta
MGP_CAROLIEiJ_G0026745Spen10080.636ENSMNEG00000042402SPEN10080.663Macaca_nemestrina
MGP_CAROLIEiJ_G0026745Spen10080.320ENSMLEG00000039293SPEN9980.185Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0026745Spen7783.832ENSMAMG00000023870si:ch1073-335m2.28483.832Mastacembelus_armatus
MGP_CAROLIEiJ_G0026745Spen8841.304ENSMZEG00005021491-8844.536Maylandia_zebra
MGP_CAROLIEiJ_G0026745Spen7377.041ENSMZEG00005011762si:ch1073-335m2.26377.041Maylandia_zebra
MGP_CAROLIEiJ_G0026745Spen10084.970ENSMAUG00000008318Spen10084.915Mesocricetus_auratus
MGP_CAROLIEiJ_G0026745Spen10080.043ENSMICG00000030994SPEN10079.940Microcebus_murinus
MGP_CAROLIEiJ_G0026745Spen10087.524ENSMOCG00000016083Spen10087.469Microtus_ochrogaster
MGP_CAROLIEiJ_G0026745Spen5977.907ENSMMOG00000021742si:ch1073-335m2.26577.907Mola_mola
MGP_CAROLIEiJ_G0026745Spen9781.461ENSMALG00000008625-6956.617Monopterus_albus
MGP_CAROLIEiJ_G0026745Spen10097.874ENSMUSG00000040761Spen10097.874Mus_musculus
MGP_CAROLIEiJ_G0026745Spen10095.142MGP_PahariEiJ_G0029076Spen10095.142Mus_pahari
MGP_CAROLIEiJ_G0026745Spen10097.957MGP_SPRETEiJ_G0027724Spen10097.957Mus_spretus
MGP_CAROLIEiJ_G0026745Spen9879.179ENSMPUG00000016317SPEN10078.981Mustela_putorius_furo
MGP_CAROLIEiJ_G0026745Spen9477.717ENSMLUG00000010144SPEN9992.992Myotis_lucifugus
MGP_CAROLIEiJ_G0026745Spen9880.610ENSNGAG00000000641Spen9981.409Nannospalax_galili
MGP_CAROLIEiJ_G0026745Spen8340.405ENSNBRG00000022090-8840.663Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026745Spen6877.041ENSNBRG00000005733si:ch1073-335m2.26977.041Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026745Spen9980.454ENSNLEG00000007652SPEN9980.202Nomascus_leucogenys
MGP_CAROLIEiJ_G0026745Spen8893.750ENSMEUG00000002422SPEN8993.750Notamacropus_eugenii
MGP_CAROLIEiJ_G0026745Spen9384.099ENSOPRG00000015800SPEN9383.915Ochotona_princeps
MGP_CAROLIEiJ_G0026745Spen10077.283ENSODEG00000016644SPEN10076.788Octodon_degus
MGP_CAROLIEiJ_G0026745Spen9977.399ENSOCUG00000010840SPEN9977.632Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0026745Spen8281.871ENSORLG00000018414si:ch1073-335m2.27863.095Oryzias_latipes
MGP_CAROLIEiJ_G0026745Spen8381.871ENSORLG00020009351si:ch1073-335m2.27863.095Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026745Spen6677.665ENSORLG00020007735-6277.665Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026745Spen6277.665ENSORLG00015022085-6377.665Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026745Spen8584.884ENSOMEG00000007639-7584.884Oryzias_melastigma
MGP_CAROLIEiJ_G0026745Spen7365.494ENSOMEG00000004509si:ch1073-335m2.27964.286Oryzias_melastigma
MGP_CAROLIEiJ_G0026745Spen10080.239ENSOGAG00000025110SPEN10079.772Otolemur_garnettii
MGP_CAROLIEiJ_G0026745Spen9979.177ENSOARG00000008477SPEN9978.986Ovis_aries
MGP_CAROLIEiJ_G0026745Spen9980.482ENSPPAG00000035690SPEN10079.929Pan_paniscus
MGP_CAROLIEiJ_G0026745Spen10080.630ENSPTRG00000000210SPEN10080.081Pan_troglodytes
MGP_CAROLIEiJ_G0026745Spen10079.642ENSPANG00000006293SPEN10079.506Papio_anubis
MGP_CAROLIEiJ_G0026745Spen94100.000ENSPKIG00000010492si:ch1073-335m2.288100.000Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026745Spen8484.699ENSPKIG00000002617SPEN9084.699Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026745Spen9764.583ENSPSIG00000008026SPEN9964.435Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026745Spen9987.747ENSPEMG00000022997Spen10087.747Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026745Spen7285.207ENSPFOG00000017986si:ch1073-335m2.27685.207Poecilia_formosa
MGP_CAROLIEiJ_G0026745Spen7285.207ENSPLAG00000016625si:ch1073-335m2.27685.207Poecilia_latipinna
MGP_CAROLIEiJ_G0026745Spen7285.207ENSPMEG00000002674si:ch1073-335m2.27685.207Poecilia_mexicana
MGP_CAROLIEiJ_G0026745Spen9744.943ENSPMEG00000006764-9173.783Poecilia_mexicana
MGP_CAROLIEiJ_G0026745Spen9744.865ENSPREG00000010399-9174.157Poecilia_reticulata
MGP_CAROLIEiJ_G0026745Spen8585.207ENSPREG00000005357si:ch1073-335m2.27685.207Poecilia_reticulata
MGP_CAROLIEiJ_G0026745Spen10080.892ENSPPYG00000001834SPEN10080.342Pongo_abelii
MGP_CAROLIEiJ_G0026745Spen8890.391ENSPCAG00000009543SPEN9286.850Procavia_capensis
MGP_CAROLIEiJ_G0026745Spen10079.337ENSPCOG00000021735SPEN10078.736Propithecus_coquereli
MGP_CAROLIEiJ_G0026745Spen8487.234ENSPVAG00000013794SPEN8487.225Pteropus_vampyrus
MGP_CAROLIEiJ_G0026745Spen7377.041ENSPNYG00000009042si:ch1073-335m2.26477.041Pundamilia_nyererei
MGP_CAROLIEiJ_G0026745Spen9780.899ENSPNYG00000012379-9048.018Pundamilia_nyererei
MGP_CAROLIEiJ_G0026745Spen8362.205ENSPNAG00000011452si:ch1073-335m2.27862.205Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026745Spen9783.051ENSPNAG00000020795spen8677.444Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026745Spen9990.570ENSRNOG00000033556Spen10090.570Rattus_norvegicus
MGP_CAROLIEiJ_G0026745Spen9980.362ENSRBIG00000039654SPEN10080.060Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026745Spen9980.722ENSRROG00000035686SPEN10080.188Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026745Spen9783.383ENSSBOG00000028770SPEN9981.341Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026745Spen9766.667ENSSHAG00000004960SPEN9992.803Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026745Spen9583.684ENSSFOG00015010267si:ch1073-335m2.28883.684Scleropages_formosus
MGP_CAROLIEiJ_G0026745Spen9781.461ENSSMAG00000008996-9048.213Scophthalmus_maximus
MGP_CAROLIEiJ_G0026745Spen8982.022ENSSDUG00000003476-9175.836Seriola_dumerili
MGP_CAROLIEiJ_G0026745Spen7866.529ENSSDUG00000008416si:ch1073-335m2.28766.529Seriola_dumerili
MGP_CAROLIEiJ_G0026745Spen7167.175ENSSLDG00000023347si:ch1073-335m2.28166.116Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026745Spen8982.022ENSSLDG00000012950-9175.836Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026745Spen8695.370ENSSPUG00000001866-9995.370Sphenodon_punctatus
MGP_CAROLIEiJ_G0026745Spen8980.899ENSSPAG00000006014-9174.906Stegastes_partitus
MGP_CAROLIEiJ_G0026745Spen8067.409ENSSPAG00000012454si:ch1073-335m2.27958.763Stegastes_partitus
MGP_CAROLIEiJ_G0026745Spen8579.879ENSSSCG00000034484SPEN9979.655Sus_scrofa
MGP_CAROLIEiJ_G0026745Spen8746.548ENSTRUG00000024350-7055.136Takifugu_rubripes
MGP_CAROLIEiJ_G0026745Spen5982.456ENSTRUG00000021008si:ch1073-335m2.27282.456Takifugu_rubripes
MGP_CAROLIEiJ_G0026745Spen9475.392ENSTNIG00000010907-5575.633Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026745Spen7792.523ENSTBEG00000003628SPEN7792.523Tupaia_belangeri
MGP_CAROLIEiJ_G0026745Spen7993.953ENSTTRG00000015704SPEN7993.953Tursiops_truncatus
MGP_CAROLIEiJ_G0026745Spen10079.675ENSUAMG00000009600SPEN10079.491Ursus_americanus
MGP_CAROLIEiJ_G0026745Spen10078.419ENSUMAG00000021641SPEN10078.100Ursus_maritimus
MGP_CAROLIEiJ_G0026745Spen9598.519ENSVVUG00000028951SPEN99100.000Vulpes_vulpes
MGP_CAROLIEiJ_G0026745Spen9756.638ENSXETG00000023114SPEN9957.506Xenopus_tropicalis
MGP_CAROLIEiJ_G0026745Spen7384.024ENSXCOG00000004516si:ch1073-335m2.28060.662Xiphophorus_couchianus
MGP_CAROLIEiJ_G0026745Spen7661.111ENSXMAG00000029887si:ch1073-335m2.28061.111Xiphophorus_maculatus
MGP_CAROLIEiJ_G0026745Spen9744.790ENSXMAG00000021384-9072.453Xiphophorus_maculatus

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