EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0026911 (Gene tree)
Gene ID: 110293767
Gene Symbol: Pusl1
Alias: 2810021I11Rik
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 3891 bases
Position: chr4:145794159-145798049
Accession: 110293767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0066393	PseudoU_synth_1	PF01416.20	1.7e-33	1	2
MGP_CAROLIEiJ_P0066393	PseudoU_synth_1	PF01416.20	1.7e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0066396	-	680	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0066397	-	515	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0066394	-	598	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0066395	-	904	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0066393	-	1182	-	MGP_CAROLIEiJ_P0066393	291 (aa)	XP_021017293	UPI000A317F2A
MGP_CAROLIEiJ_T0066391	-	722	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0066398	-	469	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0026911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0026911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.381	ENSG00000169972	PUSL1	98	84.553	Homo_sapiens
MGP_CAROLIEiJ_G0026911	Pusl1	94	47.826	ENSAPOG00000016290	pusl1	92	47.826	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0026911	Pusl1	98	78.322	ENSAMEG00000013752	PUSL1	94	78.322	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0026911	Pusl1	97	44.014	ENSACIG00000015240	pusl1	99	45.985	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0026911	Pusl1	99	46.735	ENSAOCG00000019419	pusl1	87	46.735	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0026911	Pusl1	98	47.038	ENSAPEG00000005452	pusl1	95	47.038	Amphiprion_percula
MGP_CAROLIEiJ_G0026911	Pusl1	94	48.921	ENSATEG00000024154	pusl1	92	48.921	Anabas_testudineus
MGP_CAROLIEiJ_G0026911	Pusl1	94	52.708	ENSAPLG00000004946	PUSL1	92	52.708	Anas_platyrhynchos
MGP_CAROLIEiJ_G0026911	Pusl1	87	54.297	ENSACAG00000014111	PUSL1	96	54.297	Anolis_carolinensis
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.381	ENSANAG00000037456	PUSL1	96	79.381	Aotus_nancymaae
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.399	ENSACLG00000008675	pusl1	94	47.410	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0026911	Pusl1	94	49.635	ENSAMXG00000044007	pusl1	93	49.635	Astyanax_mexicanus
MGP_CAROLIEiJ_G0026911	Pusl1	97	80.783	ENSBTAG00000007619	PUSL1	97	80.783	Bos_taurus
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.381	ENSCJAG00000010972	PUSL1	96	79.381	Callithrix_jacchus
MGP_CAROLIEiJ_G0026911	Pusl1	97	77.739	ENSCAFG00000019291	PUSL1	93	77.739	Canis_familiaris
MGP_CAROLIEiJ_G0026911	Pusl1	97	79.859	ENSCAFG00020011568	PUSL1	92	79.859	Canis_lupus_dingo
MGP_CAROLIEiJ_G0026911	Pusl1	97	81.851	ENSCHIG00000012615	PUSL1	98	81.851	Capra_hircus
MGP_CAROLIEiJ_G0026911	Pusl1	97	77.385	ENSCPOG00000005149	PUSL1	92	77.385	Cavia_porcellus
MGP_CAROLIEiJ_G0026911	Pusl1	100	80.412	ENSCCAG00000027475	PUSL1	96	80.412	Cebus_capucinus
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.381	ENSCATG00000018260	PUSL1	96	79.381	Cercocebus_atys
MGP_CAROLIEiJ_G0026911	Pusl1	97	78.092	ENSCLAG00000005232	PUSL1	93	78.092	Chinchilla_lanigera
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.725	ENSCSAG00000000680	PUSL1	96	79.725	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0026911	Pusl1	96	52.650	ENSCPBG00000022621	PUSL1	96	52.650	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0026911	Pusl1	100	80.069	ENSCANG00000034373	PUSL1	96	80.069	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0026911	Pusl1	100	87.973	ENSCGRG00001012429	Pusl1	100	87.973	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0026911	Pusl1	100	87.973	ENSCGRG00000006466	Pusl1	100	87.973	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0026911	Pusl1	94	50.179	ENSCSEG00000005159	pusl1	92	50.179	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0026911	Pusl1	80	46.154	ENSCVAG00000012923	pusl1	90	46.154	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.029	ENSDARG00000074565	pusl1	97	48.029	Danio_rerio
MGP_CAROLIEiJ_G0026911	Pusl1	93	32.226	FBgn0083976	CG34140	98	32.226	Drosophila_melanogaster
MGP_CAROLIEiJ_G0026911	Pusl1	99	79.514	ENSECAG00000006248	PUSL1	95	79.514	Equus_caballus
MGP_CAROLIEiJ_G0026911	Pusl1	98	76.125	ENSEEUG00000000837	PUSL1	97	76.125	Erinaceus_europaeus
MGP_CAROLIEiJ_G0026911	Pusl1	94	48.913	ENSELUG00000015945	pusl1	94	48.913	Esox_lucius
MGP_CAROLIEiJ_G0026911	Pusl1	98	79.371	ENSFCAG00000007617	PUSL1	95	79.371	Felis_catus
MGP_CAROLIEiJ_G0026911	Pusl1	95	51.439	ENSFHEG00000006370	pusl1	92	51.439	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0026911	Pusl1	94	51.071	ENSGMOG00000019388	pusl1	98	51.071	Gadus_morhua
MGP_CAROLIEiJ_G0026911	Pusl1	96	52.313	ENSGALG00000001714	PUSL1	96	52.313	Gallus_gallus
MGP_CAROLIEiJ_G0026911	Pusl1	95	50.714	ENSGAFG00000007546	pusl1	95	50.714	Gambusia_affinis
MGP_CAROLIEiJ_G0026911	Pusl1	95	47.312	ENSGACG00000007848	pusl1	91	47.312	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0026911	Pusl1	96	53.004	ENSGAGG00000004730	PUSL1	96	53.004	Gopherus_agassizii
MGP_CAROLIEiJ_G0026911	Pusl1	85	80.488	ENSGGOG00000005364	PUSL1	95	80.488	Gorilla_gorilla
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.214	ENSHBUG00000001264	pusl1	92	48.214	Haplochromis_burtoni
MGP_CAROLIEiJ_G0026911	Pusl1	99	75.779	ENSHGLG00000017570	PUSL1	94	75.779	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0026911	Pusl1	90	76.894	ENSHGLG00100007641	PUSL1	87	76.894	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0026911	Pusl1	95	51.064	ENSHCOG00000010077	pusl1	99	51.095	Hippocampus_comes
MGP_CAROLIEiJ_G0026911	Pusl1	96	48.399	ENSIPUG00000023921	pusl1	96	48.399	Ictalurus_punctatus
MGP_CAROLIEiJ_G0026911	Pusl1	99	80.836	ENSSTOG00000001783	PUSL1	90	80.836	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0026911	Pusl1	100	82.818	ENSJJAG00000020471	Pusl1	99	83.219	Jaculus_jaculus
MGP_CAROLIEiJ_G0026911	Pusl1	90	47.348	ENSKMAG00000005154	pusl1	89	47.348	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0026911	Pusl1	94	50.545	ENSLBEG00000013469	pusl1	94	50.545	Labrus_bergylta
MGP_CAROLIEiJ_G0026911	Pusl1	66	52.577	ENSLACG00000018795	PUSL1	95	52.577	Latimeria_chalumnae
MGP_CAROLIEiJ_G0026911	Pusl1	96	47.857	ENSLOCG00000002210	pusl1	95	47.857	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0026911	Pusl1	90	77.947	ENSLAFG00000013685	PUSL1	99	77.947	Loxodonta_africana
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.725	ENSMFAG00000046288	PUSL1	96	79.725	Macaca_fascicularis
MGP_CAROLIEiJ_G0026911	Pusl1	100	70.790	ENSMMUG00000016279	PUSL1	96	70.790	Macaca_mulatta
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.725	ENSMNEG00000037989	PUSL1	96	79.725	Macaca_nemestrina
MGP_CAROLIEiJ_G0026911	Pusl1	94	48.746	ENSMAMG00000016538	pusl1	91	48.746	Mastacembelus_armatus
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.399	ENSMZEG00005026990	pusl1	96	45.357	Maylandia_zebra
MGP_CAROLIEiJ_G0026911	Pusl1	96	52.297	ENSMGAG00000003037	PUSL1	96	52.297	Meleagris_gallopavo
MGP_CAROLIEiJ_G0026911	Pusl1	100	88.316	ENSMAUG00000019924	Pusl1	100	88.316	Mesocricetus_auratus
MGP_CAROLIEiJ_G0026911	Pusl1	99	79.167	ENSMICG00000014171	PUSL1	98	79.167	Microcebus_murinus
MGP_CAROLIEiJ_G0026911	Pusl1	100	87.973	ENSMOCG00000005602	Pusl1	100	87.973	Microtus_ochrogaster
MGP_CAROLIEiJ_G0026911	Pusl1	95	47.312	ENSMMOG00000003269	pusl1	99	46.975	Mola_mola
MGP_CAROLIEiJ_G0026911	Pusl1	94	47.842	ENSMALG00000021686	pusl1	91	47.842	Monopterus_albus
MGP_CAROLIEiJ_G0026911	Pusl1	100	97.251	ENSMUSG00000051557	Pusl1	100	97.251	Mus_musculus
MGP_CAROLIEiJ_G0026911	Pusl1	100	97.251	MGP_PahariEiJ_G0029260	Pusl1	100	97.251	Mus_pahari
MGP_CAROLIEiJ_G0026911	Pusl1	100	97.251	MGP_SPRETEiJ_G0027906	Pusl1	100	97.251	Mus_spretus
MGP_CAROLIEiJ_G0026911	Pusl1	99	77.431	ENSMPUG00000014313	PUSL1	94	77.431	Mustela_putorius_furo
MGP_CAROLIEiJ_G0026911	Pusl1	99	83.737	ENSNGAG00000004647	Pusl1	87	83.737	Nannospalax_galili
MGP_CAROLIEiJ_G0026911	Pusl1	86	47.410	ENSNBRG00000014762	pusl1	91	47.410	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0026911	Pusl1	91	79.623	ENSNLEG00000000051	PUSL1	96	79.623	Nomascus_leucogenys
MGP_CAROLIEiJ_G0026911	Pusl1	97	64.311	ENSMEUG00000011649	-	99	64.311	Notamacropus_eugenii
MGP_CAROLIEiJ_G0026911	Pusl1	94	50.909	ENSMEUG00000005176	-	99	50.909	Notamacropus_eugenii
MGP_CAROLIEiJ_G0026911	Pusl1	95	76.173	ENSODEG00000008247	PUSL1	89	76.173	Octodon_degus
MGP_CAROLIEiJ_G0026911	Pusl1	99	48.148	ENSONIG00000019361	pusl1	99	48.148	Oreochromis_niloticus
MGP_CAROLIEiJ_G0026911	Pusl1	94	47.842	ENSORLG00000016228	pusl1	93	47.842	Oryzias_latipes
MGP_CAROLIEiJ_G0026911	Pusl1	94	48.561	ENSORLG00020013710	pusl1	93	48.561	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0026911	Pusl1	95	47.518	ENSORLG00015008715	pusl1	98	47.518	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0026911	Pusl1	94	48.188	ENSOMEG00000018897	pusl1	94	48.188	Oryzias_melastigma
MGP_CAROLIEiJ_G0026911	Pusl1	97	80.851	ENSOGAG00000031692	PUSL1	98	80.851	Otolemur_garnettii
MGP_CAROLIEiJ_G0026911	Pusl1	91	80.451	ENSOARG00000004905	PUSL1	100	80.451	Ovis_aries
MGP_CAROLIEiJ_G0026911	Pusl1	100	78.694	ENSPPAG00000029283	PUSL1	96	78.694	Pan_paniscus
MGP_CAROLIEiJ_G0026911	Pusl1	98	79.021	ENSPPRG00000023329	PUSL1	95	79.021	Panthera_pardus
MGP_CAROLIEiJ_G0026911	Pusl1	90	79.389	ENSPTIG00000018532	PUSL1	97	79.389	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0026911	Pusl1	100	78.694	ENSPTRG00000000021	PUSL1	96	78.694	Pan_troglodytes
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.725	ENSPANG00000000591	PUSL1	96	79.725	Papio_anubis
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.201	ENSPKIG00000002447	pusl1	96	48.201	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0026911	Pusl1	85	56.000	ENSPSIG00000002781	PUSL1	92	56.000	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0026911	Pusl1	96	46.099	ENSPMGG00000011051	pusl1	99	45.848	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0026911	Pusl1	100	90.378	ENSPEMG00000013541	Pusl1	100	90.378	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0026911	Pusl1	99	63.793	ENSPCIG00000007816	-	66	63.793	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0026911	Pusl1	95	52.857	ENSPFOG00000015448	pusl1	91	52.857	Poecilia_formosa
MGP_CAROLIEiJ_G0026911	Pusl1	95	52.857	ENSPLAG00000004348	pusl1	93	52.857	Poecilia_latipinna
MGP_CAROLIEiJ_G0026911	Pusl1	95	52.857	ENSPMEG00000000931	pusl1	93	52.857	Poecilia_mexicana
MGP_CAROLIEiJ_G0026911	Pusl1	95	52.518	ENSPREG00000002324	pusl1	93	52.518	Poecilia_reticulata
MGP_CAROLIEiJ_G0026911	Pusl1	91	74.717	ENSPPYG00000002014	PUSL1	94	74.717	Pongo_abelii
MGP_CAROLIEiJ_G0026911	Pusl1	84	67.490	ENSPCAG00000002272	PUSL1	99	67.490	Procavia_capensis
MGP_CAROLIEiJ_G0026911	Pusl1	74	82.576	ENSPVAG00000001016	PUSL1	71	82.576	Pteropus_vampyrus
MGP_CAROLIEiJ_G0026911	Pusl1	81	48.333	ENSPNYG00000006588	pusl1	98	48.333	Pundamilia_nyererei
MGP_CAROLIEiJ_G0026911	Pusl1	96	49.286	ENSPNAG00000024441	pusl1	96	49.286	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0026911	Pusl1	100	93.814	ENSRNOG00000022354	Pusl1	100	93.814	Rattus_norvegicus
MGP_CAROLIEiJ_G0026911	Pusl1	100	80.069	ENSRBIG00000036842	PUSL1	96	80.069	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0026911	Pusl1	100	79.725	ENSRROG00000030704	PUSL1	96	79.725	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0026911	Pusl1	91	78.491	ENSSBOG00000032249	PUSL1	96	78.491	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0026911	Pusl1	52	62.667	ENSSHAG00000004840	-	85	58.537	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0026911	Pusl1	97	49.123	ENSSFOG00015008281	pusl1	94	49.123	Scleropages_formosus
MGP_CAROLIEiJ_G0026911	Pusl1	98	46.735	ENSSMAG00000007187	pusl1	93	46.735	Scophthalmus_maximus
MGP_CAROLIEiJ_G0026911	Pusl1	98	47.279	ENSSDUG00000000287	pusl1	99	44.710	Seriola_dumerili
MGP_CAROLIEiJ_G0026911	Pusl1	95	48.929	ENSSLDG00000009605	pusl1	88	48.929	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0026911	Pusl1	65	75.532	ENSSARG00000005323	-	100	75.532	Sorex_araneus
MGP_CAROLIEiJ_G0026911	Pusl1	98	42.568	ENSSPAG00000002528	pusl1	99	44.727	Stegastes_partitus
MGP_CAROLIEiJ_G0026911	Pusl1	100	78.007	ENSSSCG00000003338	PUSL1	95	78.007	Sus_scrofa
MGP_CAROLIEiJ_G0026911	Pusl1	93	54.348	ENSTGUG00000003214	PUSL1	100	53.659	Taeniopygia_guttata
MGP_CAROLIEiJ_G0026911	Pusl1	82	30.268	ENSTGUG00000000778	-	52	30.268	Taeniopygia_guttata
MGP_CAROLIEiJ_G0026911	Pusl1	95	46.786	ENSTRUG00000010102	pusl1	93	46.786	Takifugu_rubripes
MGP_CAROLIEiJ_G0026911	Pusl1	62	43.956	ENSTNIG00000005789	pusl1	81	43.956	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0026911	Pusl1	86	76.757	ENSTBEG00000005001	PUSL1	96	76.757	Tupaia_belangeri
MGP_CAROLIEiJ_G0026911	Pusl1	98	71.080	ENSTTRG00000017030	PUSL1	95	71.080	Tursiops_truncatus
MGP_CAROLIEiJ_G0026911	Pusl1	84	79.098	ENSUAMG00000012801	PUSL1	81	79.098	Ursus_americanus
MGP_CAROLIEiJ_G0026911	Pusl1	84	78.689	ENSUMAG00000002084	PUSL1	81	78.689	Ursus_maritimus
MGP_CAROLIEiJ_G0026911	Pusl1	98	79.021	ENSVVUG00000004320	PUSL1	93	69.876	Vulpes_vulpes
MGP_CAROLIEiJ_G0026911	Pusl1	78	50.439	ENSXETG00000011145	pusl1	99	50.439	Xenopus_tropicalis
MGP_CAROLIEiJ_G0026911	Pusl1	95	50.896	ENSXCOG00000017748	pusl1	98	50.896	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0026911	Pusl1	95	52.158	ENSXMAG00000018846	pusl1	93	52.158	Xiphophorus_maculatus