EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027043 (Gene tree)
Gene ID: 110294495
Gene Symbol: Nom1
Alias: D5Kng1|Gm1040|LOC381627
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 24170 bases
Position: chr5:24001270-24025439
Accession: 1861749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0067089	MA3	PF02847.17	7.1e-23	1	1
MGP_CAROLIEiJ_P0067089	MIF4G	PF02854.19	9.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0067089	-	8554	-	MGP_CAROLIEiJ_P0067089	854 (aa)	-	-
MGP_CAROLIEiJ_T0067090	-	531	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027043	Nom1	95	71.172	ENSG00000146909	NOM1	97	71.731	Homo_sapiens
MGP_CAROLIEiJ_G0027043	Nom1	61	67.245	ENSAPOG00000012073	nom1	97	53.412	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027043	Nom1	81	70.531	ENSAMEG00000001412	NOM1	99	70.531	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027043	Nom1	83	67.437	ENSACIG00000018050	nom1	99	53.382	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027043	Nom1	61	66.089	ENSAOCG00000006229	nom1	97	52.990	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027043	Nom1	61	66.281	ENSAPEG00000015994	nom1	98	53.189	Amphiprion_percula
MGP_CAROLIEiJ_G0027043	Nom1	83	57.104	ENSATEG00000005405	nom1	97	53.629	Anabas_testudineus
MGP_CAROLIEiJ_G0027043	Nom1	76	63.456	ENSAPLG00000006585	NOM1	99	62.519	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027043	Nom1	67	66.494	ENSACAG00000011192	NOM1	67	66.494	Anolis_carolinensis
MGP_CAROLIEiJ_G0027043	Nom1	94	53.317	ENSACLG00000000033	nom1	97	53.930	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027043	Nom1	62	62.264	ENSAMXG00000041486	nom1	98	48.328	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027043	Nom1	95	63.647	ENSBTAG00000016435	NOM1	97	64.005	Bos_taurus
MGP_CAROLIEiJ_G0027043	Nom1	95	69.628	ENSCJAG00000004336	NOM1	97	70.554	Callithrix_jacchus
MGP_CAROLIEiJ_G0027043	Nom1	95	68.182	ENSCAFG00020005121	NOM1	98	66.974	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027043	Nom1	90	64.295	ENSCHIG00000020102	NOM1	96	63.876	Capra_hircus
MGP_CAROLIEiJ_G0027043	Nom1	95	72.215	ENSTSYG00000000227	NOM1	97	70.972	Carlito_syrichta
MGP_CAROLIEiJ_G0027043	Nom1	61	82.792	ENSCAPG00000016273	NOM1	100	82.792	Cavia_aperea
MGP_CAROLIEiJ_G0027043	Nom1	95	68.121	ENSCPOG00000025538	NOM1	98	67.381	Cavia_porcellus
MGP_CAROLIEiJ_G0027043	Nom1	95	55.156	ENSCCAG00000014944	NOM1	100	82.865	Cebus_capucinus
MGP_CAROLIEiJ_G0027043	Nom1	86	70.270	ENSCLAG00000000267	NOM1	85	72.841	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027043	Nom1	70	73.603	ENSCPBG00000018215	NOM1	83	73.603	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027043	Nom1	61	38.868	ENSCING00000005248	-	98	34.667	Ciona_intestinalis
MGP_CAROLIEiJ_G0027043	Nom1	69	77.119	ENSCANG00000041984	NOM1	99	77.969	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027043	Nom1	95	80.802	ENSCGRG00001020293	Nom1	97	81.340	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027043	Nom1	62	90.602	ENSCGRG00000005405	Nom1	100	90.602	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027043	Nom1	91	51.327	ENSCSEG00000000932	nom1	94	51.557	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027043	Nom1	94	53.230	ENSCVAG00000007562	nom1	97	52.764	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027043	Nom1	95	52.878	ENSDARG00000060027	nom1	99	65.489	Danio_rerio
MGP_CAROLIEiJ_G0027043	Nom1	80	66.955	ENSDORG00000015682	Nom1	100	66.571	Dipodomys_ordii
MGP_CAROLIEiJ_G0027043	Nom1	59	38.641	FBgn0035336	CG9004	78	35.601	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027043	Nom1	97	55.728	ENSETEG00000003104	NOM1	98	56.109	Echinops_telfairi
MGP_CAROLIEiJ_G0027043	Nom1	50	50.580	ENSEBUG00000010077	nom1	95	50.580	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027043	Nom1	79	76.226	ENSEASG00005001489	NOM1	96	70.190	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027043	Nom1	79	73.813	ENSECAG00000007596	NOM1	91	68.910	Equus_caballus
MGP_CAROLIEiJ_G0027043	Nom1	61	66.092	ENSELUG00000006266	nom1	98	51.794	Esox_lucius
MGP_CAROLIEiJ_G0027043	Nom1	95	66.388	ENSFCAG00000006467	NOM1	97	67.654	Felis_catus
MGP_CAROLIEiJ_G0027043	Nom1	80	61.857	ENSFALG00000006904	NOM1	99	62.714	Ficedula_albicollis
MGP_CAROLIEiJ_G0027043	Nom1	95	70.388	ENSFDAG00000016241	NOM1	98	70.581	Fukomys_damarensis
MGP_CAROLIEiJ_G0027043	Nom1	61	66.089	ENSFHEG00000015974	nom1	97	53.438	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027043	Nom1	79	53.362	ENSGMOG00000005129	nom1	99	49.448	Gadus_morhua
MGP_CAROLIEiJ_G0027043	Nom1	97	55.995	ENSGALG00000006437	NOM1	93	56.643	Gallus_gallus
MGP_CAROLIEiJ_G0027043	Nom1	61	65.703	ENSGAFG00000003211	nom1	97	52.913	Gambusia_affinis
MGP_CAROLIEiJ_G0027043	Nom1	94	58.214	ENSGAGG00000014347	NOM1	98	58.588	Gopherus_agassizii
MGP_CAROLIEiJ_G0027043	Nom1	95	71.394	ENSGGOG00000010920	NOM1	90	71.849	Gorilla_gorilla
MGP_CAROLIEiJ_G0027043	Nom1	94	52.885	ENSHBUG00000014616	nom1	97	54.015	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027043	Nom1	96	70.838	ENSHGLG00000007392	NOM1	97	69.953	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027043	Nom1	83	85.127	ENSHGLG00100014407	NOM1	97	85.127	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027043	Nom1	63	60.998	ENSIPUG00000013980	nom1	98	51.013	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027043	Nom1	66	83.099	ENSSTOG00000031736	NOM1	99	83.099	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027043	Nom1	57	88.753	ENSJJAG00000011716	Nom1	99	88.753	Jaculus_jaculus
MGP_CAROLIEiJ_G0027043	Nom1	95	53.708	ENSLACG00000011777	NOM1	98	54.028	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027043	Nom1	94	55.012	ENSLOCG00000012452	nom1	99	54.177	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027043	Nom1	95	63.482	ENSLAFG00000007119	NOM1	100	62.867	Loxodonta_africana
MGP_CAROLIEiJ_G0027043	Nom1	95	68.166	ENSMMUG00000039033	NOM1	97	68.581	Macaca_mulatta
MGP_CAROLIEiJ_G0027043	Nom1	62	83.902	ENSMLEG00000037062	NOM1	99	83.902	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027043	Nom1	94	51.887	ENSMAMG00000004118	nom1	97	51.493	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027043	Nom1	94	52.688	ENSMZEG00005000384	nom1	97	53.930	Maylandia_zebra
MGP_CAROLIEiJ_G0027043	Nom1	80	62.787	ENSMGAG00000005051	NOM1	99	63.218	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027043	Nom1	100	80.070	ENSMAUG00000017988	Nom1	100	80.765	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027043	Nom1	95	70.438	ENSMICG00000017531	NOM1	98	70.602	Microcebus_murinus
MGP_CAROLIEiJ_G0027043	Nom1	99	82.181	ENSMOCG00000015962	Nom1	99	82.787	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027043	Nom1	94	50.302	ENSMMOG00000004419	nom1	96	50.060	Mola_mola
MGP_CAROLIEiJ_G0027043	Nom1	96	62.457	ENSMODG00000005177	NOM1	99	63.700	Monodelphis_domestica
MGP_CAROLIEiJ_G0027043	Nom1	89	52.125	ENSMALG00000008800	nom1	97	52.478	Monopterus_albus
MGP_CAROLIEiJ_G0027043	Nom1	100	97.190	ENSMUSG00000001569	Nom1	100	97.190	Mus_musculus
MGP_CAROLIEiJ_G0027043	Nom1	100	96.846	MGP_SPRETEiJ_G0028039	Nom1	100	96.846	Mus_spretus
MGP_CAROLIEiJ_G0027043	Nom1	79	67.982	ENSMPUG00000009745	NOM1	100	67.677	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027043	Nom1	70	73.456	ENSMLUG00000009129	NOM1	98	73.906	Myotis_lucifugus
MGP_CAROLIEiJ_G0027043	Nom1	94	53.809	ENSNBRG00000016429	nom1	93	67.052	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027043	Nom1	95	69.056	ENSNLEG00000000238	NOM1	97	70.248	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027043	Nom1	85	64.835	ENSMEUG00000001108	NOM1	87	64.835	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027043	Nom1	85	60.870	ENSOPRG00000014676	NOM1	86	60.870	Ochotona_princeps
MGP_CAROLIEiJ_G0027043	Nom1	81	74.143	ENSODEG00000009399	NOM1	100	75.107	Octodon_degus
MGP_CAROLIEiJ_G0027043	Nom1	82	55.951	ENSONIG00000005958	nom1	99	54.430	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027043	Nom1	54	76.522	ENSOANG00000006139	-	97	76.522	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027043	Nom1	95	71.584	ENSOCUG00000004071	-	98	72.090	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027043	Nom1	92	60.881	ENSOCUG00000021448	-	100	60.377	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027043	Nom1	93	51.562	ENSORLG00000010541	nom1	98	51.559	Oryzias_latipes
MGP_CAROLIEiJ_G0027043	Nom1	78	56.295	ENSORLG00020010789	nom1	94	55.846	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027043	Nom1	93	50.656	ENSORLG00015010475	nom1	98	52.158	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027043	Nom1	59	66.012	ENSOMEG00000004219	nom1	97	51.625	Oryzias_melastigma
MGP_CAROLIEiJ_G0027043	Nom1	68	77.202	ENSOGAG00000001124	NOM1	95	77.202	Otolemur_garnettii
MGP_CAROLIEiJ_G0027043	Nom1	79	68.275	ENSOARG00000007261	NOM1	98	66.621	Ovis_aries
MGP_CAROLIEiJ_G0027043	Nom1	95	71.292	ENSPPAG00000041374	NOM1	97	71.614	Pan_paniscus
MGP_CAROLIEiJ_G0027043	Nom1	82	70.499	ENSPTIG00000013532	NOM1	98	70.556	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027043	Nom1	95	71.411	ENSPTRG00000019917	NOM1	97	71.967	Pan_troglodytes
MGP_CAROLIEiJ_G0027043	Nom1	95	71.564	ENSPANG00000007605	NOM1	97	71.953	Papio_anubis
MGP_CAROLIEiJ_G0027043	Nom1	95	51.013	ENSPKIG00000005825	nom1	98	51.013	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027043	Nom1	65	71.351	ENSPSIG00000017848	NOM1	97	69.007	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027043	Nom1	94	52.073	ENSPMGG00000002577	nom1	97	53.846	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027043	Nom1	100	82.639	ENSPEMG00000024180	Nom1	100	83.449	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027043	Nom1	96	62.002	ENSPCIG00000027941	NOM1	95	62.557	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027043	Nom1	61	66.281	ENSPFOG00000015771	nom1	98	52.019	Poecilia_formosa
MGP_CAROLIEiJ_G0027043	Nom1	61	66.281	ENSPLAG00000007856	nom1	97	53.799	Poecilia_latipinna
MGP_CAROLIEiJ_G0027043	Nom1	94	52.467	ENSPMEG00000014155	nom1	97	54.423	Poecilia_mexicana
MGP_CAROLIEiJ_G0027043	Nom1	94	52.906	ENSPREG00000008850	nom1	97	52.955	Poecilia_reticulata
MGP_CAROLIEiJ_G0027043	Nom1	95	68.149	ENSPPYG00000018222	NOM1	96	68.133	Pongo_abelii
MGP_CAROLIEiJ_G0027043	Nom1	75	72.494	ENSPCAG00000000440	NOM1	99	58.354	Procavia_capensis
MGP_CAROLIEiJ_G0027043	Nom1	62	81.629	ENSPCOG00000015222	NOM1	99	81.629	Propithecus_coquereli
MGP_CAROLIEiJ_G0027043	Nom1	95	66.828	ENSPVAG00000014760	NOM1	97	67.467	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027043	Nom1	94	52.210	ENSPNYG00000006975	nom1	97	64.444	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027043	Nom1	87	60.781	ENSPNAG00000011085	nom1	98	47.582	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027043	Nom1	95	86.084	ENSRNOG00000048969	AABR07059041.1	100	86.084	Rattus_norvegicus
MGP_CAROLIEiJ_G0027043	Nom1	95	71.293	ENSRBIG00000037042	NOM1	97	72.123	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027043	Nom1	95	71.056	ENSRROG00000037293	NOM1	97	71.886	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027043	Nom1	79	70.778	ENSSHAG00000017998	-	100	70.445	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027043	Nom1	56	62.708	ENSSFOG00015003196	nom1	99	62.708	Scleropages_formosus
MGP_CAROLIEiJ_G0027043	Nom1	94	52.106	ENSSMAG00000011047	nom1	98	52.086	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027043	Nom1	94	53.469	ENSSDUG00000006834	nom1	97	52.821	Seriola_dumerili
MGP_CAROLIEiJ_G0027043	Nom1	94	53.744	ENSSLDG00000021812	nom1	97	53.212	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027043	Nom1	81	55.417	ENSSPUG00000002556	NOM1	86	77.049	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027043	Nom1	94	52.047	ENSSPAG00000000953	nom1	97	51.821	Stegastes_partitus
MGP_CAROLIEiJ_G0027043	Nom1	85	60.326	ENSTGUG00000000702	-	99	62.304	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027043	Nom1	62	65.472	ENSTRUG00000010239	nom1	97	52.927	Takifugu_rubripes
MGP_CAROLIEiJ_G0027043	Nom1	94	50.484	ENSTNIG00000012783	nom1	99	52.091	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027043	Nom1	96	65.566	ENSTTRG00000009691	NOM1	99	66.392	Tursiops_truncatus
MGP_CAROLIEiJ_G0027043	Nom1	95	65.533	ENSUAMG00000025450	NOM1	97	67.217	Ursus_americanus
MGP_CAROLIEiJ_G0027043	Nom1	85	69.344	ENSUMAG00000014275	NOM1	100	70.168	Ursus_maritimus
MGP_CAROLIEiJ_G0027043	Nom1	95	66.393	ENSVVUG00000002608	NOM1	98	66.282	Vulpes_vulpes
MGP_CAROLIEiJ_G0027043	Nom1	96	54.102	ENSXETG00000021611	nom1	94	69.362	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027043	Nom1	94	53.968	ENSXMAG00000002451	nom1	97	53.762	Xiphophorus_maculatus