EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027304 (Gene tree)
Gene ID: 110295295
Gene Symbol: Fip1l1
Alias: 1300019H17Rik|Rje
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 63412 bases
Position: chr5:67457240-67520651
Accession: 110295295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0068659	Fip1	PF05182.13	5.2e-25	1	1
MGP_CAROLIEiJ_P0068656	Fip1	PF05182.13	1.3e-24	1	1
MGP_CAROLIEiJ_P0068657	Fip1	PF05182.13	1.4e-24	1	1
MGP_CAROLIEiJ_P0068654	Fip1	PF05182.13	1.4e-24	1	1
MGP_CAROLIEiJ_P0068655	Fip1	PF05182.13	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0068660	-	1447	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068661	-	607	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068662	-	587	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068655	-	4808	-	MGP_CAROLIEiJ_P0068655	581 (aa)	XP_021019468	UPI000002313D
MGP_CAROLIEiJ_T0068654	-	4712	-	MGP_CAROLIEiJ_P0068654	545 (aa)	XP_021019471	UPI000002313E
MGP_CAROLIEiJ_T0068657	-	1971	XM_021163813	MGP_CAROLIEiJ_P0068657	536 (aa)	XP_021019472	UPI000017F2FE
MGP_CAROLIEiJ_T0068656	-	2141	-	MGP_CAROLIEiJ_P0068656	508 (aa)	-	UPI000002313C
MGP_CAROLIEiJ_T0068664	-	2291	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068665	-	540	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068663	-	425	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068659	-	1482	-	MGP_CAROLIEiJ_P0068659	434 (aa)	-	UPI0006454878
MGP_CAROLIEiJ_T0068658	-	4956	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068670	-	601	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027304	Fip1l1	72	78.947	ENSACIG00000001454	fip1l1b	73	67.196	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.143	ENSAOCG00000021043	fip1l1b	84	60.168	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.143	ENSAPEG00000022229	fip1l1b	84	60.168	Amphiprion_percula
MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.993	ENSATEG00000021757	fip1l1b	83	62.309	Anabas_testudineus
MGP_CAROLIEiJ_G0027304	Fip1l1	90	82.908	ENSAPLG00000003042	-	98	74.955	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027304	Fip1l1	90	89.967	ENSACAG00000010556	-	97	80.492	Anolis_carolinensis
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.892	ENSACLG00000010418	fip1l1b	83	61.002	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027304	Fip1l1	59	39.818	ENSAMXG00000031045	fip1l1a	54	50.526	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027304	Fip1l1	79	52.355	ENSAMXG00000011126	fip1l1b	74	63.025	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	92.870	ENSBTAG00000020653	FIP1L1	100	92.139	Bos_taurus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	91.930	ENSCHIG00000025903	-	100	91.228	Capra_hircus
MGP_CAROLIEiJ_G0027304	Fip1l1	91	85.991	ENSCAPG00000009569	-	98	88.713	Cavia_aperea
MGP_CAROLIEiJ_G0027304	Fip1l1	96	96.768	ENSCPOG00000010770	-	100	95.871	Cavia_porcellus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	89.037	ENSCPBG00000025019	-	94	89.881	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027304	Fip1l1	100	98.795	ENSCGRG00001018568	Fip1l1	100	98.795	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027304	Fip1l1	100	98.795	ENSCGRG00000000208	Fip1l1	100	98.795	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027304	Fip1l1	99	58.951	ENSCSEG00000006583	fip1l1b	83	63.158	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.323	ENSCVAG00000023435	fip1l1b	83	60.870	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027304	Fip1l1	90	75.325	ENSETEG00000018271	-	100	75.325	Echinops_telfairi
MGP_CAROLIEiJ_G0027304	Fip1l1	52	42.735	ENSEBUG00000016765	-	84	60.504	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027304	Fip1l1	100	91.667	ENSEASG00005019566	-	100	91.061	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027304	Fip1l1	88	92.428	ENSEEUG00000004965	-	71	95.489	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027304	Fip1l1	97	60.073	ENSFHEG00000003843	fip1l1b	70	61.558	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027304	Fip1l1	74	32.626	ENSGMOG00000012065	-	53	41.053	Gadus_morhua
MGP_CAROLIEiJ_G0027304	Fip1l1	99	51.370	ENSGMOG00000004913	fip1l1b	74	53.012	Gadus_morhua
MGP_CAROLIEiJ_G0027304	Fip1l1	100	82.234	ENSGALG00000013943	-	100	82.234	Gallus_gallus
MGP_CAROLIEiJ_G0027304	Fip1l1	52	46.025	ENSGALG00000007683	-	98	61.111	Gallus_gallus
MGP_CAROLIEiJ_G0027304	Fip1l1	98	51.770	ENSGAFG00000008253	fip1l1b	82	60.814	Gambusia_affinis
MGP_CAROLIEiJ_G0027304	Fip1l1	99	52.310	ENSGACG00000015946	fip1l1b	86	55.577	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027304	Fip1l1	71	42.012	ENSGAGG00000017677	-	69	52.549	Gopherus_agassizii
MGP_CAROLIEiJ_G0027304	Fip1l1	100	89.037	ENSGAGG00000009763	-	93	89.881	Gopherus_agassizii
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.892	ENSHBUG00000013978	fip1l1b	87	59.329	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.357	ENSHCOG00000015834	fip1l1b	69	64.691	Hippocampus_comes
MGP_CAROLIEiJ_G0027304	Fip1l1	96	53.160	ENSIPUG00000022454	fip1l1b	88	50.693	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.979	ENSKMAG00000021938	fip1l1b	83	60.566	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	56.545	ENSLBEG00000028819	fip1l1b	83	62.526	Labrus_bergylta
MGP_CAROLIEiJ_G0027304	Fip1l1	100	68.885	ENSLACG00000011991	fip1l1a	97	62.136	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.005	ENSLOCG00000014127	fip1l1b	92	60.192	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	58.393	ENSMAMG00000004535	fip1l1b	83	61.354	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.892	ENSMZEG00005023828	fip1l1b	83	61.002	Maylandia_zebra
MGP_CAROLIEiJ_G0027304	Fip1l1	90	85.685	ENSMGAG00000011885	-	97	85.685	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027304	Fip1l1	100	93.460	ENSMAUG00000010526	Fip1l1	100	93.460	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	98.321	ENSMOCG00000008020	Fip1l1	100	98.321	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027304	Fip1l1	100	92.414	ENSMODG00000020654	-	93	85.178	Monodelphis_domestica
MGP_CAROLIEiJ_G0027304	Fip1l1	98	43.187	ENSMALG00000000838	fip1l1b	79	61.386	Monopterus_albus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	100.000	ENSMUSG00000029227	Fip1l1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	100.000	MGP_PahariEiJ_G0017085	Fip1l1	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0027304	Fip1l1	100	100.000	MGP_SPRETEiJ_G0028299	Fip1l1	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0027304	Fip1l1	100	98.349	ENSNGAG00000008849	Fip1l1	100	98.349	Nannospalax_galili
MGP_CAROLIEiJ_G0027304	Fip1l1	99	58.188	ENSNBRG00000017832	fip1l1b	84	58.910	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027304	Fip1l1	74	63.889	ENSMEUG00000012782	-	69	89.655	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.840	ENSONIG00000008785	fip1l1b	84	58.491	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027304	Fip1l1	57	45.669	ENSOANG00000002812	-	91	58.209	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027304	Fip1l1	91	86.466	ENSOANG00000003384	-	98	75.179	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.541	ENSORLG00000004397	fip1l1b	83	60.480	Oryzias_latipes
MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.901	ENSORLG00020008716	fip1l1b	83	60.699	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027304	Fip1l1	99	61.081	ENSORLG00015006736	fip1l1b	99	56.396	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027304	Fip1l1	99	46.632	ENSOMEG00000015730	fip1l1b	83	47.537	Oryzias_melastigma
MGP_CAROLIEiJ_G0027304	Fip1l1	95	91.573	ENSOARG00000018767	-	100	90.824	Ovis_aries
MGP_CAROLIEiJ_G0027304	Fip1l1	100	54.255	ENSPKIG00000003396	fip1l1b	55	51.402	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027304	Fip1l1	100	98.623	ENSPEMG00000002025	Fip1l1	100	98.623	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027304	Fip1l1	76	88.485	ENSPCIG00000019318	-	97	87.869	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.293	ENSPFOG00000014745	fip1l1b	83	60.256	Poecilia_formosa
MGP_CAROLIEiJ_G0027304	Fip1l1	99	56.140	ENSPLAG00000010954	fip1l1b	69	62.183	Poecilia_latipinna
MGP_CAROLIEiJ_G0027304	Fip1l1	99	57.469	ENSPMEG00000019187	fip1l1b	83	60.470	Poecilia_mexicana
MGP_CAROLIEiJ_G0027304	Fip1l1	98	44.213	ENSPREG00000012535	fip1l1b	62	64.388	Poecilia_reticulata
MGP_CAROLIEiJ_G0027304	Fip1l1	70	98.214	ENSPVAG00000000716	-	71	98.214	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027304	Fip1l1	79	50.411	ENSPNYG00000015976	fip1l1b	58	64.091	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027304	Fip1l1	83	52.139	ENSPNAG00000015341	fip1l1b	69	58.147	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027304	Fip1l1	59	43.260	ENSPNAG00000009853	fip1l1a	53	52.128	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027304	Fip1l1	100	100.000	ENSRNOG00000002275	Fip1l1	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0027304	Fip1l1	94	88.725	ENSSHAG00000015789	-	98	83.713	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027304	Fip1l1	72	43.887	ENSSFOG00015010948	-	55	58.252	Scleropages_formosus
MGP_CAROLIEiJ_G0027304	Fip1l1	91	55.709	ENSSFOG00015017653	fip1l1b	61	48.634	Scleropages_formosus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	58.750	ENSSMAG00000013444	fip1l1b	83	65.066	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.066	ENSSDUG00000004117	fip1l1b	83	61.656	Seriola_dumerili
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.532	ENSSLDG00000024099	fip1l1b	83	66.157	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027304	Fip1l1	88	92.784	ENSSARG00000001973	-	89	92.784	Sorex_araneus
MGP_CAROLIEiJ_G0027304	Fip1l1	75	60.494	ENSSPUG00000017328	-	92	73.929	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027304	Fip1l1	99	56.969	ENSSPAG00000017564	fip1l1b	84	59.539	Stegastes_partitus
MGP_CAROLIEiJ_G0027304	Fip1l1	90	82.645	ENSTGUG00000007834	-	97	83.471	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027304	Fip1l1	99	53.607	ENSTNIG00000004104	fip1l1b	83	50.000	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027304	Fip1l1	72	93.210	ENSTBEG00000007839	-	82	90.741	Tupaia_belangeri
MGP_CAROLIEiJ_G0027304	Fip1l1	91	94.962	ENSUMAG00000002758	-	99	93.182	Ursus_maritimus
MGP_CAROLIEiJ_G0027304	Fip1l1	85	96.569	ENSVPAG00000011574	-	90	96.569	Vicugna_pacos
MGP_CAROLIEiJ_G0027304	Fip1l1	92	73.194	ENSXETG00000011679	fip1l1	81	73.810	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.358	ENSXMAG00000017620	fip1l1b	83	60.814	Xiphophorus_maculatus