EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0027347 (Gene tree)
Gene ID
110294336
Gene Symbol
Ythdc1
Alias
A730098D12Rik
Full Name
YTH domain containing 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
33366 bases
Position
chr5:79875173-79908538
Accession
110294336
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0068877YTHPF04146.151.8e-3911
MGP_CAROLIEiJ_P0068878YTHPF04146.151.8e-3911
MGP_CAROLIEiJ_P0068880YTHPF04146.151.9e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0068879-4343-MGP_CAROLIEiJ_P0068879544 (aa)--
MGP_CAROLIEiJ_T0068881-1689-MGP_CAROLIEiJ_P0068881562 (aa)--
MGP_CAROLIEiJ_T0068877-3219XM_021162494MGP_CAROLIEiJ_P0068877709 (aa)XP_021018153UPI000A317740
MGP_CAROLIEiJ_T0068884-3965--- (aa)--
MGP_CAROLIEiJ_T0068885-593--- (aa)--
MGP_CAROLIEiJ_T0068886-1246--- (aa)--
MGP_CAROLIEiJ_T0068880-2957-MGP_CAROLIEiJ_P0068880735 (aa)XP_021018150UPI000A314EE3
MGP_CAROLIEiJ_T0068878-3266XM_021162492MGP_CAROLIEiJ_P0068878727 (aa)XP_021018151UPI000A314BFF
MGP_CAROLIEiJ_T0068882-2917--- (aa)--
MGP_CAROLIEiJ_T0068883-6314--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0027347's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027347's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0027347Ythdc19792.322ENSG00000083896YTHDC110094.595Homo_sapiens
MGP_CAROLIEiJ_G0027347Ythdc15759.518ENSAPOG00000013997ythdc15762.530Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027347Ythdc19791.439ENSAMEG00000005688YTHDC19393.787Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027347Ythdc16470.213ENSACIG00000019728ythdc18059.809Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027347Ythdc15761.239ENSAOCG00000000239ythdc15967.464Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027347Ythdc15064.151ENSAPEG00000000618ythdc15368.661Amphiprion_percula
MGP_CAROLIEiJ_G0027347Ythdc19184.639ENSAPLG00000009921YTHDC19285.693Anas_platyrhynchos
MGP_CAROLIEiJ_G0027347Ythdc19383.828ENSACAG00000009697YTHDC19383.828Anolis_carolinensis
MGP_CAROLIEiJ_G0027347Ythdc19792.505ENSANAG00000001522YTHDC19395.549Aotus_nancymaae
MGP_CAROLIEiJ_G0027347Ythdc19352.416ENSACLG00000019371ythdc15966.133Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027347Ythdc19363.348ENSAMXG00000006978ythdc19264.978Astyanax_mexicanus
MGP_CAROLIEiJ_G0027347Ythdc19791.956ENSBTAG00000015572YTHDC19394.807Bos_taurus
MGP_CAROLIEiJ_G0027347Ythdc19792.870ENSCJAG00000009934YTHDC19395.846Callithrix_jacchus
MGP_CAROLIEiJ_G0027347Ythdc19791.257ENSCAFG00000002821YTHDC19393.639Canis_familiaris
MGP_CAROLIEiJ_G0027347Ythdc19791.257ENSCAFG00020027112YTHDC19393.639Canis_lupus_dingo
MGP_CAROLIEiJ_G0027347Ythdc19791.544ENSCHIG00000004810YTHDC19891.743Capra_hircus
MGP_CAROLIEiJ_G0027347Ythdc19792.687ENSTSYG00000011668YTHDC19395.104Carlito_syrichta
MGP_CAROLIEiJ_G0027347Ythdc19572.868ENSCAPG00000008722YTHDC19067.079Cavia_aperea
MGP_CAROLIEiJ_G0027347Ythdc19792.322ENSCPOG00000010929YTHDC19287.685Cavia_porcellus
MGP_CAROLIEiJ_G0027347Ythdc110097.119ENSCCAG00000035754YTHDC110097.119Cebus_capucinus
MGP_CAROLIEiJ_G0027347Ythdc19695.396ENSCATG00000036320YTHDC110095.396Cercocebus_atys
MGP_CAROLIEiJ_G0027347Ythdc19996.699ENSCLAG00000005482YTHDC19996.699Chinchilla_lanigera
MGP_CAROLIEiJ_G0027347Ythdc19792.687ENSCSAG00000005252YTHDC19395.697Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027347Ythdc19286.140ENSCPBG00000021965YTHDC19486.265Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027347Ythdc19792.870ENSCANG00000004769YTHDC19993.542Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027347Ythdc110098.100ENSCGRG00001000816Ythdc110098.100Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027347Ythdc19998.056ENSCGRG00000009807Ythdc19998.056Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027347Ythdc19350.474ENSCSEG00000020404ythdc15966.667Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027347Ythdc15759.202ENSCVAG00000022349ythdc15965.542Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027347Ythdc19362.774ENSDARG00000051953ythdc15877.887Danio_rerio
MGP_CAROLIEiJ_G0027347Ythdc19789.964ENSDNOG00000004949YTHDC19393.481Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027347Ythdc19996.974ENSDORG00000013045Ythdc110096.940Dipodomys_ordii
MGP_CAROLIEiJ_G0027347Ythdc178100.000ENSETEG00000001878YTHDC178100.000Echinops_telfairi
MGP_CAROLIEiJ_G0027347Ythdc19792.168ENSEASG00005018383YTHDC19394.379Equus_asinus_asinus
MGP_CAROLIEiJ_G0027347Ythdc19791.439ENSECAG00000018303YTHDC19992.737Equus_caballus
MGP_CAROLIEiJ_G0027347Ythdc19790.859ENSEEUG00000015466YTHDC19393.917Erinaceus_europaeus
MGP_CAROLIEiJ_G0027347Ythdc19659.363ENSELUG00000014029ythdc15776.667Esox_lucius
MGP_CAROLIEiJ_G0027347Ythdc19793.066ENSFCAG00000026791YTHDC19394.815Felis_catus
MGP_CAROLIEiJ_G0027347Ythdc16296.939ENSFALG00000006581YTHDC18793.431Ficedula_albicollis
MGP_CAROLIEiJ_G0027347Ythdc19393.143ENSFDAG00000018560YTHDC19294.428Fukomys_damarensis
MGP_CAROLIEiJ_G0027347Ythdc16660.317ENSFHEG00000001286ythdc16056.024Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027347Ythdc16066.946ENSGMOG00000018815ythdc17367.797Gadus_morhua
MGP_CAROLIEiJ_G0027347Ythdc19682.994ENSGALG00000035906YTHDC19082.070Gallus_gallus
MGP_CAROLIEiJ_G0027347Ythdc15762.150ENSGACG00000015486ythdc15762.530Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027347Ythdc19385.777ENSGAGG00000007108YTHDC19385.337Gopherus_agassizii
MGP_CAROLIEiJ_G0027347Ythdc19693.715ENSGGOG00000021958YTHDC19993.530Gorilla_gorilla
MGP_CAROLIEiJ_G0027347Ythdc19352.602ENSHBUG00000019288ythdc15966.133Haplochromis_burtoni
MGP_CAROLIEiJ_G0027347Ythdc19469.927ENSHGLG00000003239-5778.469Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027347Ythdc110095.929ENSHGLG00000006319-10095.929Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027347Ythdc19468.459ENSHGLG00100008060-5776.010Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027347Ythdc19995.055ENSHGLG00100001556-10095.055Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027347Ythdc15470.213ENSHCOG00000001520ythdc18470.213Hippocampus_comes
MGP_CAROLIEiJ_G0027347Ythdc19366.812ENSIPUG00000018136ythdc16183.295Ictalurus_punctatus
MGP_CAROLIEiJ_G0027347Ythdc110097.151ENSSTOG00000013652YTHDC110097.151Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027347Ythdc19390.095ENSJJAG00000010268Ythdc19393.006Jaculus_jaculus
MGP_CAROLIEiJ_G0027347Ythdc15760.502ENSKMAG00000006483ythdc18565.306Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027347Ythdc16463.462ENSLBEG00000020831ythdc17275.000Labrus_bergylta
MGP_CAROLIEiJ_G0027347Ythdc18772.727ENSLACG00000004893YTHDC19273.750Latimeria_chalumnae
MGP_CAROLIEiJ_G0027347Ythdc19372.041ENSLOCG00000003045ythdc19288.221Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027347Ythdc19790.311ENSLAFG00000021592YTHDC19393.255Loxodonta_africana
MGP_CAROLIEiJ_G0027347Ythdc110096.201ENSMFAG00000031927YTHDC110096.201Macaca_fascicularis
MGP_CAROLIEiJ_G0027347Ythdc19694.667ENSMMUG00000002265YTHDC19894.667Macaca_mulatta
MGP_CAROLIEiJ_G0027347Ythdc19792.870ENSMNEG00000033751YTHDC19993.358Macaca_nemestrina
MGP_CAROLIEiJ_G0027347Ythdc19693.727ENSMLEG00000042147YTHDC19993.542Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027347Ythdc15561.631ENSMAMG00000013122ythdc15866.587Mastacembelus_armatus
MGP_CAROLIEiJ_G0027347Ythdc19352.416ENSMZEG00005023173ythdc15966.133Maylandia_zebra
MGP_CAROLIEiJ_G0027347Ythdc19384.421ENSMGAG00000010391YTHDC19285.312Meleagris_gallopavo
MGP_CAROLIEiJ_G0027347Ythdc110097.829ENSMAUG00000001286Ythdc110097.829Mesocricetus_auratus
MGP_CAROLIEiJ_G0027347Ythdc110097.283ENSMICG00000034640YTHDC110097.283Microcebus_murinus
MGP_CAROLIEiJ_G0027347Ythdc110097.829ENSMOCG00000020201Ythdc110097.829Microtus_ochrogaster
MGP_CAROLIEiJ_G0027347Ythdc19651.268ENSMODG00000010076-9651.114Monodelphis_domestica
MGP_CAROLIEiJ_G0027347Ythdc16557.660ENSMODG00000009173-8861.353Monodelphis_domestica
MGP_CAROLIEiJ_G0027347Ythdc18573.507ENSMODG00000014337-9569.830Monodelphis_domestica
MGP_CAROLIEiJ_G0027347Ythdc19388.113ENSMODG00000020754-9288.576Monodelphis_domestica
MGP_CAROLIEiJ_G0027347Ythdc15067.116ENSMALG00000013412ythdc15668.768Monopterus_albus
MGP_CAROLIEiJ_G0027347Ythdc110099.633ENSMUSG00000035851Ythdc110099.633Mus_musculus
MGP_CAROLIEiJ_G0027347Ythdc110099.457MGP_PahariEiJ_G0017126Ythdc110099.457Mus_pahari
MGP_CAROLIEiJ_G0027347Ythdc110099.864MGP_SPRETEiJ_G0028339Ythdc110099.864Mus_spretus
MGP_CAROLIEiJ_G0027347Ythdc19973.836ENSMPUG00000001743YTHDC17698.172Mustela_putorius_furo
MGP_CAROLIEiJ_G0027347Ythdc19392.571ENSMLUG00000016300YTHDC19293.675Myotis_lucifugus
MGP_CAROLIEiJ_G0027347Ythdc17791.924ENSNGAG00000024000Ythdc19391.943Nannospalax_galili
MGP_CAROLIEiJ_G0027347Ythdc16062.424ENSNBRG00000007663ythdc17066.355Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027347Ythdc19692.804ENSNLEG00000009202YTHDC19992.435Nomascus_leucogenys
MGP_CAROLIEiJ_G0027347Ythdc18281.940ENSMEUG00000007128YTHDC18181.940Notamacropus_eugenii
MGP_CAROLIEiJ_G0027347Ythdc17598.017ENSOPRG00000008986YTHDC17498.017Ochotona_princeps
MGP_CAROLIEiJ_G0027347Ythdc19791.225ENSODEG00000001715YTHDC19394.362Octodon_degus
MGP_CAROLIEiJ_G0027347Ythdc19352.788ENSONIG00000012651ythdc15966.590Oreochromis_niloticus
MGP_CAROLIEiJ_G0027347Ythdc18877.064ENSOANG00000014398YTHDC15596.962Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027347Ythdc19381.268ENSOCUG00000015886YTHDC15894.059Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027347Ythdc15660.870ENSORLG00000030544ythdc16066.747Oryzias_latipes
MGP_CAROLIEiJ_G0027347Ythdc15660.145ENSORLG00020019316ythdc16066.747Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027347Ythdc15661.275ENSOMEG00000000551ythdc16065.281Oryzias_melastigma
MGP_CAROLIEiJ_G0027347Ythdc19791.408ENSOGAG00000003362YTHDC19394.065Otolemur_garnettii
MGP_CAROLIEiJ_G0027347Ythdc19791.956ENSOARG00000008633YTHDC19394.807Ovis_aries
MGP_CAROLIEiJ_G0027347Ythdc19695.018ENSPPAG00000041315YTHDC19995.018Pan_paniscus
MGP_CAROLIEiJ_G0027347Ythdc19791.423ENSPPRG00000011979YTHDC19395.022Panthera_pardus
MGP_CAROLIEiJ_G0027347Ythdc19392.966ENSPTIG00000015527YTHDC19394.651Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027347Ythdc19695.018ENSPTRG00000016105YTHDC19995.018Pan_troglodytes
MGP_CAROLIEiJ_G0027347Ythdc19695.396ENSPANG00000021590YTHDC19995.396Papio_anubis
MGP_CAROLIEiJ_G0027347Ythdc17686.170ENSPKIG00000018497ythdc19368.169Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027347Ythdc19185.865ENSPSIG00000002782YTHDC19285.414Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027347Ythdc15556.364ENSPMGG00000000970-7264.460Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027347Ythdc19998.331ENSPEMG00000013850Ythdc110098.331Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027347Ythdc19387.964ENSPCIG00000006870YTHDC19288.427Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027347Ythdc15759.318ENSPLAG00000011079ythdc18565.385Poecilia_latipinna
MGP_CAROLIEiJ_G0027347Ythdc16863.004ENSPREG00000016973ythdc15959.799Poecilia_reticulata
MGP_CAROLIEiJ_G0027347Ythdc17995.329ENSPPYG00000014726YTHDC19195.329Pongo_abelii
MGP_CAROLIEiJ_G0027347Ythdc17898.810ENSPCAG00000009607YTHDC17788.636Procavia_capensis
MGP_CAROLIEiJ_G0027347Ythdc19786.957ENSPCOG00000019105YTHDC19290.469Propithecus_coquereli
MGP_CAROLIEiJ_G0027347Ythdc19789.091ENSPVAG00000015551YTHDC19392.910Pteropus_vampyrus
MGP_CAROLIEiJ_G0027347Ythdc19352.416ENSPNYG00000011687ythdc15966.133Pundamilia_nyererei
MGP_CAROLIEiJ_G0027347Ythdc19368.360ENSPNAG00000028365ythdc19368.307Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027347Ythdc110098.238ENSRNOG00000001996Ythdc110098.238Rattus_norvegicus
MGP_CAROLIEiJ_G0027347Ythdc19692.251ENSRBIG00000028279YTHDC19992.066Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027347Ythdc19792.870ENSRROG00000035028YTHDC19993.542Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027347Ythdc110096.201ENSSBOG00000022353YTHDC110096.201Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027347Ythdc19386.924ENSSHAG00000002538YTHDC19188.430Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027347Ythdc19368.261ENSSFOG00015003298ythdc16085.545Scleropages_formosus
MGP_CAROLIEiJ_G0027347Ythdc15760.090ENSSMAG00000009086ythdc16065.707Scophthalmus_maximus
MGP_CAROLIEiJ_G0027347Ythdc15560.775ENSSDUG00000022008ythdc19456.799Seriola_dumerili
MGP_CAROLIEiJ_G0027347Ythdc15560.775ENSSLDG00000007926ythdc19456.461Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027347Ythdc17295.029ENSSARG00000010960YTHDC19194.073Sorex_araneus
MGP_CAROLIEiJ_G0027347Ythdc19382.275ENSSPUG00000009357YTHDC19483.359Sphenodon_punctatus
MGP_CAROLIEiJ_G0027347Ythdc15762.156ENSSPAG00000011449ythdc19456.259Stegastes_partitus
MGP_CAROLIEiJ_G0027347Ythdc19791.107ENSSSCG00000035505YTHDC19393.586Sus_scrofa
MGP_CAROLIEiJ_G0027347Ythdc19385.460ENSTGUG00000004452-9284.718Taeniopygia_guttata
MGP_CAROLIEiJ_G0027347Ythdc16461.224ENSTRUG00000010142ythdc16970.000Takifugu_rubripes
MGP_CAROLIEiJ_G0027347Ythdc19363.312ENSTNIG00000013243ythdc18965.581Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027347Ythdc19387.092ENSTBEG00000011546YTHDC19287.685Tupaia_belangeri
MGP_CAROLIEiJ_G0027347Ythdc19790.164ENSTTRG00000005083YTHDC19392.899Tursiops_truncatus
MGP_CAROLIEiJ_G0027347Ythdc18694.071ENSUAMG00000010388YTHDC19294.712Ursus_americanus
MGP_CAROLIEiJ_G0027347Ythdc19982.754ENSUMAG00000013668YTHDC19882.754Ursus_maritimus
MGP_CAROLIEiJ_G0027347Ythdc19790.359ENSVPAG00000009040YTHDC19294.512Vicugna_pacos
MGP_CAROLIEiJ_G0027347Ythdc19493.195ENSVVUG00000005387YTHDC19293.440Vulpes_vulpes
MGP_CAROLIEiJ_G0027347Ythdc19273.887ENSXETG00000017960ythdc19173.591Xenopus_tropicalis
MGP_CAROLIEiJ_G0027347Ythdc16952.899ENSXCOG00000000530ythdc18953.986Xiphophorus_couchianus

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