EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027377 (Gene tree)
Gene ID: 110295086
Gene Symbol: Grsf1
Alias: D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 16537 bases
Position: chr5:81931863-81948399
Accession: 110295086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0068973	RRM_1	PF00076.22	2.3e-23	1	1
MGP_CAROLIEiJ_P0068972	RRM_1	PF00076.22	8.4e-23	1	1
MGP_CAROLIEiJ_P0068975	RRM_1	PF00076.22	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0068978	-	319	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068974	-	866	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0068975	-	776	-	MGP_CAROLIEiJ_P0068975	137 (aa)	-	UPI00015AA2CA
MGP_CAROLIEiJ_T0068976	-	485	-	MGP_CAROLIEiJ_P0068976	57 (aa)	-	UPI00015AA2C9
MGP_CAROLIEiJ_T0068977	-	423	-	MGP_CAROLIEiJ_P0068977	11 (aa)	-	UPI00015AA2CB
MGP_CAROLIEiJ_T0068972	-	2533	XM_021163551	MGP_CAROLIEiJ_P0068972	479 (aa)	XP_021019210	UPI000A31B2A9
MGP_CAROLIEiJ_T0068973	-	2281	XM_021163552	MGP_CAROLIEiJ_P0068973	362 (aa)	XP_021019211	UPI00001C3463

Gene Model

Click here to download MGP_CAROLIEiJ_G0027377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0027377	Grsf1	70	67.532	MGP_CAROLIEiJ_G0015396	Hnrnph3	58	67.089
MGP_CAROLIEiJ_G0027377	Grsf1	99	51.111	MGP_CAROLIEiJ_G0033396	Hnrnph2	62	63.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSG00000132463	GRSF1	100	93.396	Homo_sapiens
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSAMEG00000005896	GRSF1	100	94.199	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027377	Grsf1	99	77.778	ENSACAG00000012921	GRSF1	91	61.491	Anolis_carolinensis
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSANAG00000022114	GRSF1	100	92.276	Aotus_nancymaae
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.891	ENSBTAG00000008577	GRSF1	100	94.199	Bos_taurus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCJAG00000014477	GRSF1	99	94.805	Callithrix_jacchus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCAFG00000002922	GRSF1	100	95.018	Canis_familiaris
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCAFG00020027060	GRSF1	100	97.619	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	ENSCHIG00000021580	GRSF1	100	92.292	Capra_hircus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSTSYG00000008487	-	100	95.597	Carlito_syrichta
MGP_CAROLIEiJ_G0027377	Grsf1	100	91.241	ENSTSYG00000028860	-	100	77.473	Carlito_syrichta
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSCAPG00000000156	GRSF1	100	88.636	Cavia_aperea
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSCPOG00000011662	GRSF1	100	88.366	Cavia_porcellus
MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	ENSCCAG00000028735	-	100	91.232	Cebus_capucinus
MGP_CAROLIEiJ_G0027377	Grsf1	91	81.081	ENSCCAG00000024189	-	87	77.372	Cebus_capucinus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCATG00000035808	GRSF1	99	94.194	Cercocebus_atys
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSCLAG00000003057	GRSF1	100	88.920	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCSAG00000004856	GRSF1	100	91.441	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027377	Grsf1	99	77.778	ENSCPBG00000019502	GRSF1	86	66.944	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSCANG00000037992	GRSF1	100	94.340	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSCGRG00001019953	Grsf1	100	96.133	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSCGRG00000005357	Grsf1	100	96.122	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSDORG00000015145	Grsf1	100	96.350	Dipodomys_ordii
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.891	ENSETEG00000013786	GRSF1	100	93.333	Echinops_telfairi
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSEASG00005016685	GRSF1	94	92.292	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSECAG00000024208	GRSF1	94	92.693	Equus_caballus
MGP_CAROLIEiJ_G0027377	Grsf1	93	59.259	ENSELUG00000011613	-	91	41.713	Esox_lucius
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSFCAG00000007270	GRSF1	100	93.528	Felis_catus
MGP_CAROLIEiJ_G0027377	Grsf1	98	55.970	ENSFALG00000008394	GRSF1	98	55.882	Ficedula_albicollis
MGP_CAROLIEiJ_G0027377	Grsf1	100	89.781	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
MGP_CAROLIEiJ_G0027377	Grsf1	98	59.701	ENSGALG00000031160	GRSF1	75	50.681	Gallus_gallus
MGP_CAROLIEiJ_G0027377	Grsf1	99	76.471	ENSGAGG00000006013	GRSF1	99	66.736	Gopherus_agassizii
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSGGOG00000014852	-	100	93.082	Gorilla_gorilla
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSHGLG00000000661	GRSF1	100	87.812	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSHGLG00100005974	GRSF1	100	93.431	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSSTOG00000011569	GRSF1	100	96.133	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	ENSJJAG00000005325	Grsf1	100	93.431	Jaculus_jaculus
MGP_CAROLIEiJ_G0027377	Grsf1	95	59.231	ENSLACG00000009507	GRSF1	97	52.975	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027377	Grsf1	100	53.957	ENSLOCG00000011589	GRSF1	77	48.718	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSLAFG00000017032	-	100	90.496	Loxodonta_africana
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSMFAG00000037346	GRSF1	99	94.516	Macaca_fascicularis
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSMMUG00000000380	GRSF1	99	94.805	Macaca_mulatta
MGP_CAROLIEiJ_G0027377	Grsf1	98	89.552	ENSMNEG00000023162	GRSF1	100	95.238	Macaca_nemestrina
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSMLEG00000007180	GRSF1	100	93.923	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027377	Grsf1	98	60.448	ENSMGAG00000009940	GRSF1	98	52.994	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	ENSMICG00000005385	GRSF1	99	93.629	Microcebus_murinus
MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	ENSMOCG00000012769	-	100	95.620	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027377	Grsf1	100	90.511	ENSMODG00000019088	GRSF1	90	79.794	Monodelphis_domestica
MGP_CAROLIEiJ_G0027377	Grsf1	100	100.000	ENSMUSG00000044221	Grsf1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027377	Grsf1	100	98.540	MGP_PahariEiJ_G0017155	Grsf1	100	98.540	Mus_pahari
MGP_CAROLIEiJ_G0027377	Grsf1	100	99.724	MGP_SPRETEiJ_G0028374	Grsf1	100	99.724	Mus_spretus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSMPUG00000009499	GRSF1	97	93.716	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.286	ENSMLUG00000028158	GRSF1	100	92.055	Myotis_lucifugus
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSNGAG00000022132	-	100	96.350	Nannospalax_galili
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSNLEG00000007721	-	99	92.903	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027377	Grsf1	82	91.964	ENSMEUG00000015942	GRSF1	99	72.067	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.891	ENSOPRG00000010148	-	78	90.000	Ochotona_princeps
MGP_CAROLIEiJ_G0027377	Grsf1	100	92.701	ENSODEG00000001826	-	100	84.969	Octodon_degus
MGP_CAROLIEiJ_G0027377	Grsf1	89	91.803	ENSODEG00000004897	-	100	76.731	Octodon_degus
MGP_CAROLIEiJ_G0027377	Grsf1	99	86.029	ENSODEG00000010775	-	100	77.193	Octodon_degus
MGP_CAROLIEiJ_G0027377	Grsf1	94	63.415	ENSOANG00000013696	-	100	63.415	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSOCUG00000010029	GRSF1	100	81.435	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027377	Grsf1	99	81.440	ENSOGAG00000026370	-	99	71.670	Otolemur_garnettii
MGP_CAROLIEiJ_G0027377	Grsf1	99	90.659	ENSOGAG00000000141	-	100	90.411	Otolemur_garnettii
MGP_CAROLIEiJ_G0027377	Grsf1	100	93.571	ENSOARG00000011898	GRSF1	100	93.699	Ovis_aries
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPPAG00000042456	-	100	93.396	Pan_paniscus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPPRG00000022913	GRSF1	100	93.528	Panthera_pardus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPTIG00000008060	GRSF1	100	94.475	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPTRG00000016136	GRSF1	99	93.226	Pan_troglodytes
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPANG00000018597	GRSF1	99	93.548	Papio_anubis
MGP_CAROLIEiJ_G0027377	Grsf1	98	74.500	ENSPSIG00000014267	-	96	74.500	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSPEMG00000012814	Grsf1	100	96.961	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027377	Grsf1	100	91.971	ENSPCIG00000000627	GRSF1	100	80.873	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027377	Grsf1	90	95.146	ENSPPYG00000014812	GRSF1	100	77.547	Pongo_abelii
MGP_CAROLIEiJ_G0027377	Grsf1	100	95.620	ENSPCAG00000013949	GRSF1	100	85.835	Procavia_capensis
MGP_CAROLIEiJ_G0027377	Grsf1	100	96.350	ENSPVAG00000004338	GRSF1	100	86.848	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027377	Grsf1	100	98.540	ENSRNOG00000003392	Grsf1	100	96.451	Rattus_norvegicus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSRBIG00000036494	GRSF1	99	94.194	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSRROG00000035735	GRSF1	99	93.871	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027377	Grsf1	91	94.805	ENSSBOG00000032141	GRSF1	82	95.726	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027377	Grsf1	100	91.971	ENSSHAG00000018365	GRSF1	98	83.377	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.161	ENSSARG00000011681	GRSF1	100	93.506	Sorex_araneus
MGP_CAROLIEiJ_G0027377	Grsf1	99	68.116	ENSSPUG00000007576	GRSF1	99	57.906	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027377	Grsf1	100	94.161	ENSSSCG00000008940	GRSF1	100	92.276	Sus_scrofa
MGP_CAROLIEiJ_G0027377	Grsf1	98	55.970	ENSTGUG00000001644	GRSF1	99	54.755	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSTBEG00000010173	GRSF1	100	94.805	Tupaia_belangeri
MGP_CAROLIEiJ_G0027377	Grsf1	99	88.643	ENSTTRG00000008405	GRSF1	97	88.451	Tursiops_truncatus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSUAMG00000008901	GRSF1	93	94.615	Ursus_americanus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSUMAG00000003757	GRSF1	87	95.014	Ursus_maritimus
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	ENSVPAG00000011889	GRSF1	100	80.886	Vicugna_pacos
MGP_CAROLIEiJ_G0027377	Grsf1	100	97.810	ENSVVUG00000004150	GRSF1	100	94.186	Vulpes_vulpes
MGP_CAROLIEiJ_G0027377	Grsf1	96	61.940	ENSXETG00000013850	grsf1	100	51.762	Xenopus_tropicalis