EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027424 (Gene tree)
Gene ID: 110294711
Gene Symbol: Sept11
Alias: 6230410I01Rik|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 83427 bases
Position: chr5:86183627-86267053
Accession: 110294711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0069175	MMR_HSR1	PF01926.23	6.6e-07	1	1
MGP_CAROLIEiJ_P0069178	MMR_HSR1	PF01926.23	2e-06	1	1
MGP_CAROLIEiJ_P0069173	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_CAROLIEiJ_P0069176	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_CAROLIEiJ_P0069179	MMR_HSR1	PF01926.23	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0069180	-	1112	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069179	-	1380	-	MGP_CAROLIEiJ_P0069179	432 (aa)	-	UPI00001F3098
MGP_CAROLIEiJ_T0069178	-	1278	-	MGP_CAROLIEiJ_P0069178	425 (aa)	-	UPI00001F3095
MGP_CAROLIEiJ_T0069177	-	438	-	MGP_CAROLIEiJ_P0069177	97 (aa)	-	UPI00064547A7
MGP_CAROLIEiJ_T0069176	-	2430	XM_021163118	MGP_CAROLIEiJ_P0069176	431 (aa)	XP_021018777	UPI0000217D11
MGP_CAROLIEiJ_T0069175	-	1797	XM_021163120	MGP_CAROLIEiJ_P0069175	425 (aa)	XP_021018779	UPI00001F3096
MGP_CAROLIEiJ_T0069174	-	625	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069173	-	5021	XM_021163119	MGP_CAROLIEiJ_P0069173	429 (aa)	XP_021018778	UPI0000192A2A

Gene Model

Click here to download MGP_CAROLIEiJ_G0027424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0027424	Sept11	67	43.878	MGP_CAROLIEiJ_G0016931	Sept4	85	45.000
MGP_CAROLIEiJ_G0027424	Sept11	98	72.771	MGP_CAROLIEiJ_G0015340	Sept10	85	76.712
MGP_CAROLIEiJ_G0027424	Sept11	69	43.234	MGP_CAROLIEiJ_G0014457	-	100	42.202
MGP_CAROLIEiJ_G0027424	Sept11	76	41.493	MGP_CAROLIEiJ_G0020551	-	90	40.828
MGP_CAROLIEiJ_G0027424	Sept11	96	41.093	MGP_CAROLIEiJ_G0031917	Sept7	76	42.690
MGP_CAROLIEiJ_G0027424	Sept11	57	38.710	MGP_CAROLIEiJ_G0020416	Sept12	82	37.931
MGP_CAROLIEiJ_G0027424	Sept11	67	43.345	MGP_CAROLIEiJ_G0017463	Sept9	81	46.465
MGP_CAROLIEiJ_G0027424	Sept11	100	82.436	MGP_CAROLIEiJ_G0032996	Sept6	100	82.258
MGP_CAROLIEiJ_G0027424	Sept11	76	40.469	MGP_CAROLIEiJ_G0030492	Sept1	100	40.816
MGP_CAROLIEiJ_G0027424	Sept11	69	44.000	MGP_CAROLIEiJ_G0020078	Sept3	89	44.000
MGP_CAROLIEiJ_G0027424	Sept11	99	79.157	MGP_CAROLIEiJ_G0016340	Sept8	88	81.915
MGP_CAROLIEiJ_G0027424	Sept11	98	61.244	MGP_CAROLIEiJ_G0027783	Sept14	85	63.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSG00000138758	SEPT11	100	99.769	Homo_sapiens
MGP_CAROLIEiJ_G0027424	Sept11	91	98.446	ENSAMEG00000013821	SEPT11	98	98.196	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027424	Sept11	98	97.596	ENSAPLG00000010395	SEPT11	98	97.596	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027424	Sept11	100	97.412	ENSACAG00000012255	SEPT11	100	96.970	Anolis_carolinensis
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSANAG00000029750	SEPT11	100	99.769	Aotus_nancymaae
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSBTAG00000021372	SEPT11	100	99.769	Bos_taurus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSCJAG00000014744	SEPT11	100	99.769	Callithrix_jacchus
MGP_CAROLIEiJ_G0027424	Sept11	98	99.760	ENSCAFG00020011148	SEPT11	99	99.760	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSCHIG00000021075	SEPT11	100	99.534	Capra_hircus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.306	ENSTSYG00000013404	-	100	99.306	Carlito_syrichta
MGP_CAROLIEiJ_G0027424	Sept11	97	90.544	ENSCAPG00000015684	SEPT11	98	90.544	Cavia_aperea
MGP_CAROLIEiJ_G0027424	Sept11	100	99.059	ENSCPOG00000009037	SEPT11	100	99.059	Cavia_porcellus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSCCAG00000022420	SEPT11	100	99.769	Cebus_capucinus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSCATG00000027299	SEPT11	100	99.769	Cercocebus_atys
MGP_CAROLIEiJ_G0027424	Sept11	98	99.279	ENSCLAG00000006114	SEPT11	99	99.279	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSCSAG00000004591	SEPT11	100	99.534	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027424	Sept11	100	97.454	ENSCPBG00000019417	SEPT11	100	97.454	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSCANG00000032458	SEPT11	100	99.769	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.306	ENSCGRG00001000184	Sept11	100	99.306	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027424	Sept11	100	99.059	ENSCGRG00000002281	Sept11	100	99.059	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027424	Sept11	100	99.537	ENSDNOG00000003551	SEPT11	100	99.537	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSDORG00000015527	Sept11	100	99.769	Dipodomys_ordii
MGP_CAROLIEiJ_G0027424	Sept11	83	100.000	ENSETEG00000000950	SEPT11	85	100.000	Echinops_telfairi
MGP_CAROLIEiJ_G0027424	Sept11	99	82.783	ENSEBUG00000003985	SEPT11	93	84.171	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027424	Sept11	100	99.074	ENSEASG00005016442	SEPT11	100	99.074	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.529	ENSECAG00000005768	SEPT11	100	99.301	Equus_caballus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSFCAG00000027412	SEPT11	100	99.769	Felis_catus
MGP_CAROLIEiJ_G0027424	Sept11	98	97.837	ENSFALG00000008500	SEPT11	94	97.837	Ficedula_albicollis
MGP_CAROLIEiJ_G0027424	Sept11	98	99.291	ENSFDAG00000020305	SEPT11	100	99.291	Fukomys_damarensis
MGP_CAROLIEiJ_G0027424	Sept11	100	97.176	ENSGALG00000011476	SEPT11	97	97.196	Gallus_gallus
MGP_CAROLIEiJ_G0027424	Sept11	100	97.685	ENSGAGG00000025821	SEPT11	100	97.685	Gopherus_agassizii
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSGGOG00000015115	SEPT11	100	99.769	Gorilla_gorilla
MGP_CAROLIEiJ_G0027424	Sept11	100	99.294	ENSHGLG00000015983	SEPT11	100	99.294	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027424	Sept11	98	99.041	ENSHGLG00100018878	SEPT11	98	99.041	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027424	Sept11	100	99.306	ENSSTOG00000008117	SEPT11	100	99.306	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSJJAG00000007698	Sept11	100	99.769	Jaculus_jaculus
MGP_CAROLIEiJ_G0027424	Sept11	92	94.103	ENSLACG00000006461	SEPT11	93	94.315	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027424	Sept11	100	99.768	ENSLAFG00000016488	SEPT11	100	99.768	Loxodonta_africana
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSMFAG00000042066	SEPT11	100	99.769	Macaca_fascicularis
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSMMUG00000019901	SEPT11	100	99.534	Macaca_mulatta
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSMNEG00000044831	SEPT11	100	99.534	Macaca_nemestrina
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSMLEG00000041438	SEPT11	100	99.769	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027424	Sept11	94	96.482	ENSMGAG00000009422	SEPT11	92	96.725	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027424	Sept11	100	99.529	ENSMAUG00000008193	Sept11	100	99.529	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027424	Sept11	100	96.528	ENSMICG00000033844	SEPT11	100	96.528	Microcebus_murinus
MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	ENSMOCG00000014932	Sept11	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027424	Sept11	100	98.353	ENSMODG00000011825	SEPT11	100	98.135	Monodelphis_domestica
MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	ENSMUSG00000058013	Sept11	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	MGP_PahariEiJ_G0017202	Sept11	100	99.765	Mus_pahari
MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	MGP_SPRETEiJ_G0028421	Sept11	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0027424	Sept11	98	97.163	ENSMPUG00000008207	SEPT11	98	97.163	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027424	Sept11	52	99.103	ENSMLUG00000024451	-	97	99.103	Myotis_lucifugus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.074	ENSNGAG00000000462	Sept11	100	99.074	Nannospalax_galili
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSNLEG00000032040	SEPT11	100	99.534	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027424	Sept11	100	87.529	ENSMEUG00000013950	-	100	87.413	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027424	Sept11	80	100.000	ENSOPRG00000000156	SEPT11	80	100.000	Ochotona_princeps
MGP_CAROLIEiJ_G0027424	Sept11	100	98.843	ENSODEG00000000877	SEPT11	100	98.843	Octodon_degus
MGP_CAROLIEiJ_G0027424	Sept11	98	95.663	ENSOANG00000013643	SEPT11	94	96.410	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.529	ENSOCUG00000001289	SEPT11	90	99.529	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027424	Sept11	99	98.372	ENSOGAG00000005210	SEPT11	100	98.372	Otolemur_garnettii
MGP_CAROLIEiJ_G0027424	Sept11	98	99.760	ENSOARG00000017493	SEPT11	94	99.524	Ovis_aries
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSPPAG00000041700	SEPT11	100	99.534	Pan_paniscus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSPPRG00000007487	SEPT11	100	99.769	Panthera_pardus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSPTIG00000017796	SEPT11	100	99.769	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSPTRG00000016192	SEPT11	100	99.534	Pan_troglodytes
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSPANG00000021634	SEPT11	100	99.769	Papio_anubis
MGP_CAROLIEiJ_G0027424	Sept11	99	96.690	ENSPSIG00000017552	SEPT11	99	96.028	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	ENSPEMG00000016338	Sept11	100	100.000	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027424	Sept11	100	98.824	ENSPCIG00000028014	SEPT11	100	98.601	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSPPYG00000014864	SEPT11	98	99.765	Pongo_abelii
MGP_CAROLIEiJ_G0027424	Sept11	83	100.000	ENSPCAG00000004069	SEPT11	85	100.000	Procavia_capensis
MGP_CAROLIEiJ_G0027424	Sept11	100	99.074	ENSPCOG00000014774	SEPT11	100	99.074	Propithecus_coquereli
MGP_CAROLIEiJ_G0027424	Sept11	100	100.000	ENSRNOG00000002182	Sept11	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSRBIG00000024343	SEPT11	100	99.769	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSRROG00000038768	SEPT11	100	99.769	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027424	Sept11	100	99.765	ENSSBOG00000020488	SEPT11	100	99.534	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027424	Sept11	100	98.824	ENSSHAG00000006125	SEPT11	100	98.601	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027424	Sept11	98	97.115	ENSSPUG00000006377	SEPT11	98	97.115	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.537	ENSSSCG00000008986	SEPT11	100	99.537	Sus_scrofa
MGP_CAROLIEiJ_G0027424	Sept11	91	95.855	ENSTGUG00000001707	-	83	95.855	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027424	Sept11	77	100.000	ENSTBEG00000012851	SEPT11	79	99.545	Tupaia_belangeri
MGP_CAROLIEiJ_G0027424	Sept11	85	100.000	ENSTTRG00000014833	SEPT11	85	100.000	Tursiops_truncatus
MGP_CAROLIEiJ_G0027424	Sept11	100	99.769	ENSUAMG00000017287	SEPT11	100	99.769	Ursus_americanus
MGP_CAROLIEiJ_G0027424	Sept11	100	98.588	ENSUMAG00000007904	SEPT11	95	98.588	Ursus_maritimus
MGP_CAROLIEiJ_G0027424	Sept11	99	98.585	ENSVVUG00000023346	SEPT11	99	99.520	Vulpes_vulpes
MGP_CAROLIEiJ_G0027424	Sept11	100	92.575	ENSXETG00000006404	sept11	99	92.791	Xenopus_tropicalis