EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0027429 (Gene tree)
Gene ID
110294221
Gene Symbol
Cnot6l
Alias
4932442K20Rik
Full Name
CCR4-NOT transcription complex subunit 6 like
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
87378 bases
Position
chr5:89137435-89224812
Accession
110294221
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0069194Exo_endo_phosPF03372.234.3e-2211
MGP_CAROLIEiJ_P0069197Exo_endo_phosPF03372.234.5e-2211
MGP_CAROLIEiJ_P0069198Exo_endo_phosPF03372.239.1e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0069201-329-MGP_CAROLIEiJ_P006920199 (aa)-UPI0001611856
MGP_CAROLIEiJ_T0069200-526-MGP_CAROLIEiJ_P0069200130 (aa)-UPI0003F48673
MGP_CAROLIEiJ_T0069203-232-MGP_CAROLIEiJ_P006920355 (aa)-UPI0001611855
MGP_CAROLIEiJ_T0069202-421-MGP_CAROLIEiJ_P006920287 (aa)-UPI0001611857
MGP_CAROLIEiJ_T0069195-3024--- (aa)--
MGP_CAROLIEiJ_T0069194-8566XM_021162285MGP_CAROLIEiJ_P0069194550 (aa)XP_021017944UPI0000024065
MGP_CAROLIEiJ_T0069197-3166-MGP_CAROLIEiJ_P0069197555 (aa)-UPI0000ED9391
MGP_CAROLIEiJ_T0069196-3310-MGP_CAROLIEiJ_P006919646 (aa)-UPI0001611854
MGP_CAROLIEiJ_T0069199-785--- (aa)--
MGP_CAROLIEiJ_T0069198-2099-MGP_CAROLIEiJ_P0069198435 (aa)-UPI0000F4ED1B
Gene Model
Click here to download MGP_CAROLIEiJ_G0027429's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027429's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0027429Cnot6l10077.355MGP_CAROLIEiJ_G0016277Cnot610077.355
MGP_CAROLIEiJ_G0027429Cnot6l5530.833MGP_CAROLIEiJ_G0015040Angel29330.380
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSG00000138767CNOT6L10098.018Homo_sapiens
MGP_CAROLIEiJ_G0027429Cnot6l9984.862ENSAPOG00000005894cnot6l10083.243Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSAMEG00000005570CNOT6L9998.014Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027429Cnot6l9985.550ENSACIG00000002515cnot6l10083.784Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027429Cnot6l9980.734ENSAOCG00000006705cnot6l10080.000Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027429Cnot6l9981.336ENSAPEG00000020035cnot6l10080.470Amphiprion_percula
MGP_CAROLIEiJ_G0027429Cnot6l9985.550ENSATEG00000008774cnot6l10083.964Anabas_testudineus
MGP_CAROLIEiJ_G0027429Cnot6l10094.784ENSAPLG00000003448CNOT6L10094.784Anas_platyrhynchos
MGP_CAROLIEiJ_G0027429Cnot6l9994.700ENSACAG00000012099CNOT6L9993.625Anolis_carolinensis
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSANAG00000023917CNOT6L10098.018Aotus_nancymaae
MGP_CAROLIEiJ_G0027429Cnot6l9984.174ENSACLG00000000879cnot6l10082.162Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027429Cnot6l9983.486ENSAMXG00000008943cnot6l9881.522Astyanax_mexicanus
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSBTAG00000049571CNOT6L10098.018Bos_taurus
MGP_CAROLIEiJ_G0027429Cnot6l10098.198ENSCJAG00000014846CNOT6L10098.198Callithrix_jacchus
MGP_CAROLIEiJ_G0027429Cnot6l10098.182ENSCAFG00000008699CNOT6L9998.195Canis_familiaris
MGP_CAROLIEiJ_G0027429Cnot6l10096.727ENSCAFG00020011108CNOT6L10096.727Canis_lupus_dingo
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSCHIG00000006297CNOT6L10098.018Capra_hircus
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSTSYG00000009068CNOT6L10098.000Carlito_syrichta
MGP_CAROLIEiJ_G0027429Cnot6l86100.000ENSCPOG00000010337CNOT6L100100.000Cavia_porcellus
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSCCAG00000025000CNOT6L10098.018Cebus_capucinus
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSCATG00000029623CNOT6L10098.018Cercocebus_atys
MGP_CAROLIEiJ_G0027429Cnot6l10097.455ENSCLAG00000004598CNOT6L10097.468Chinchilla_lanigera
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSCSAG00000004580CNOT6L10098.018Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027429Cnot6l74100.000ENSCHOG00000001108-70100.000Choloepus_hoffmanni
MGP_CAROLIEiJ_G0027429Cnot6l10096.364ENSCPBG00000019403CNOT6L10096.364Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSCANG00000028583CNOT6L10098.018Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027429Cnot6l100100.000ENSCGRG00001022099Cnot6l100100.000Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027429Cnot6l10099.273ENSCGRG00000000543Cnot6l10099.273Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027429Cnot6l9982.798ENSCSEG00000014001cnot6l10080.901Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027429Cnot6l9680.907ENSCSEG00000010395-9880.907Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027429Cnot6l9986.009ENSCVAG00000021683cnot6l9585.150Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027429Cnot6l9984.404ENSDARG00000054597cnot6l9882.696Danio_rerio
MGP_CAROLIEiJ_G0027429Cnot6l10088.267ENSDNOG00000004229CNOT6L9998.131Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027429Cnot6l10088.727ENSDORG00000011458Cnot6l10088.727Dipodomys_ordii
MGP_CAROLIEiJ_G0027429Cnot6l10070.515ENSEBUG00000004849cnot6l10069.627Eptatretus_burgeri
MGP_CAROLIEiJ_G0027429Cnot6l9997.696ENSEASG00005016429CNOT6L9297.732Equus_asinus_asinus
MGP_CAROLIEiJ_G0027429Cnot6l9997.696ENSECAG00000001582CNOT6L8897.856Equus_caballus
MGP_CAROLIEiJ_G0027429Cnot6l9983.486ENSELUG00000013353cnot6l8881.949Esox_lucius
MGP_CAROLIEiJ_G0027429Cnot6l10098.198ENSFCAG00000008322CNOT6L10098.198Felis_catus
MGP_CAROLIEiJ_G0027429Cnot6l10094.909ENSFALG00000008515CNOT6L10094.595Ficedula_albicollis
MGP_CAROLIEiJ_G0027429Cnot6l10097.455ENSFDAG00000007719CNOT6L9597.473Fukomys_damarensis
MGP_CAROLIEiJ_G0027429Cnot6l10075.583ENSFHEG00000012364cnot6l10075.943Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027429Cnot6l9662.381ENSGMOG00000011077-9962.253Gadus_morhua
MGP_CAROLIEiJ_G0027429Cnot6l9973.272ENSGMOG00000000730cnot6l10071.546Gadus_morhua
MGP_CAROLIEiJ_G0027429Cnot6l10095.818ENSGALG00000010333CNOT6L9195.479Gallus_gallus
MGP_CAROLIEiJ_G0027429Cnot6l9984.174ENSGAFG00000006105cnot6l9884.023Gambusia_affinis
MGP_CAROLIEiJ_G0027429Cnot6l9995.392ENSGAGG00000008605CNOT6L9395.417Gopherus_agassizii
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSGGOG00000023412CNOT6L9998.014Gorilla_gorilla
MGP_CAROLIEiJ_G0027429Cnot6l9984.174ENSHBUG00000004755cnot6l9583.402Haplochromis_burtoni
MGP_CAROLIEiJ_G0027429Cnot6l10097.636ENSHGLG00000006452CNOT6L10097.636Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027429Cnot6l10097.636ENSHGLG00100012384CNOT6L9897.636Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027429Cnot6l9978.211ENSHCOG00000009512cnot6l9475.786Hippocampus_comes
MGP_CAROLIEiJ_G0027429Cnot6l9982.569ENSIPUG00000009879cnot6l10080.978Ictalurus_punctatus
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSSTOG00000015293CNOT6L10098.000Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027429Cnot6l10098.727ENSJJAG00000020583Cnot6l10098.734Jaculus_jaculus
MGP_CAROLIEiJ_G0027429Cnot6l9983.945ENSKMAG00000004165cnot6l10082.162Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027429Cnot6l9982.759ENSLBEG00000027202cnot6l10081.193Labrus_bergylta
MGP_CAROLIEiJ_G0027429Cnot6l10090.727ENSLACG00000004684CNOT6L10090.000Latimeria_chalumnae
MGP_CAROLIEiJ_G0027429Cnot6l10083.666ENSLOCG00000007420cnot6l9383.063Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSLAFG00000011449CNOT6L10095.907Loxodonta_africana
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSMFAG00000044296CNOT6L10098.018Macaca_fascicularis
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSMMUG00000045609CNOT6L9998.011Macaca_mulatta
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSMNEG00000041259CNOT6L10098.018Macaca_nemestrina
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSMLEG00000029198CNOT6L9998.011Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027429Cnot6l9986.009ENSMAMG00000016954cnot6l9485.338Mastacembelus_armatus
MGP_CAROLIEiJ_G0027429Cnot6l9984.174ENSMZEG00005020235cnot6l10082.162Maylandia_zebra
MGP_CAROLIEiJ_G0027429Cnot6l10095.818ENSMGAG00000005144CNOT6L10095.315Meleagris_gallopavo
MGP_CAROLIEiJ_G0027429Cnot6l10097.658ENSMICG00000017026CNOT6L10097.658Microcebus_murinus
MGP_CAROLIEiJ_G0027429Cnot6l100100.000ENSMOCG00000009451Cnot6l100100.000Microtus_ochrogaster
MGP_CAROLIEiJ_G0027429Cnot6l9985.321ENSMMOG00000014621cnot6l10083.063Mola_mola
MGP_CAROLIEiJ_G0027429Cnot6l10097.091ENSMODG00000011744CNOT6L7597.091Monodelphis_domestica
MGP_CAROLIEiJ_G0027429Cnot6l9985.092ENSMALG00000006354cnot6l9684.774Monopterus_albus
MGP_CAROLIEiJ_G0027429Cnot6l100100.000ENSMUSG00000034724Cnot6l100100.000Mus_musculus
MGP_CAROLIEiJ_G0027429Cnot6l100100.000MGP_PahariEiJ_G0017207Cnot6l100100.000Mus_pahari
MGP_CAROLIEiJ_G0027429Cnot6l100100.000MGP_SPRETEiJ_G0028426Cnot6l100100.000Mus_spretus
MGP_CAROLIEiJ_G0027429Cnot6l9593.511ENSMPUG00000003895CNOT6L10093.511Mustela_putorius_furo
MGP_CAROLIEiJ_G0027429Cnot6l9397.276ENSMLUG00000000936CNOT6L10097.276Myotis_lucifugus
MGP_CAROLIEiJ_G0027429Cnot6l10099.640ENSNGAG00000019803Cnot6l10099.640Nannospalax_galili
MGP_CAROLIEiJ_G0027429Cnot6l8781.842ENSNBRG00000016345cnot6l8080.723Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSNLEG00000028820CNOT6L10098.018Nomascus_leucogenys
MGP_CAROLIEiJ_G0027429Cnot6l8084.127ENSMEUG00000009767-7984.000Notamacropus_eugenii
MGP_CAROLIEiJ_G0027429Cnot6l10097.636ENSODEG00000004161CNOT6L9997.653Octodon_degus
MGP_CAROLIEiJ_G0027429Cnot6l9983.673ENSONIG00000013992cnot6l9781.786Oreochromis_niloticus
MGP_CAROLIEiJ_G0027429Cnot6l10096.727ENSOANG00000003561CNOT6L10096.727Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027429Cnot6l10097.838ENSOCUG00000002497CNOT6L10097.838Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027429Cnot6l9983.641ENSORLG00000018874cnot6l10081.193Oryzias_latipes
MGP_CAROLIEiJ_G0027429Cnot6l9983.028ENSOMEG00000010026cnot6l10080.901Oryzias_melastigma
MGP_CAROLIEiJ_G0027429Cnot6l10094.595ENSOGAG00000012122CNOT6L10094.595Otolemur_garnettii
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSOARG00000017771CNOT6L10098.018Ovis_aries
MGP_CAROLIEiJ_G0027429Cnot6l84100.000ENSPPAG00000034242-99100.000Pan_paniscus
MGP_CAROLIEiJ_G0027429Cnot6l10095.455ENSPPAG00000030178-10095.455Pan_paniscus
MGP_CAROLIEiJ_G0027429Cnot6l10098.198ENSPPRG00000008857CNOT6L10098.198Panthera_pardus
MGP_CAROLIEiJ_G0027429Cnot6l10098.198ENSPTIG00000015698CNOT6L10098.198Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSPTRG00000016198CNOT6L10098.018Pan_troglodytes
MGP_CAROLIEiJ_G0027429Cnot6l84100.000ENSPTRG00000045291-99100.000Pan_troglodytes
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSPANG00000007831CNOT6L10098.018Papio_anubis
MGP_CAROLIEiJ_G0027429Cnot6l10084.420ENSPKIG00000002892cnot6l10083.152Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027429Cnot6l10095.636ENSPSIG00000016241CNOT6L10095.315Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027429Cnot6l9980.963ENSPMGG00000004021cnot6l9978.650Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027429Cnot6l100100.000ENSPEMG00000011554Cnot6l100100.000Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027429Cnot6l9971.812ENSPMAG00000005706cnot6l9672.610Petromyzon_marinus
MGP_CAROLIEiJ_G0027429Cnot6l10096.364ENSPCIG00000027504-10096.364Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027429Cnot6l9985.550ENSPFOG00000013163cnot6l10083.423Poecilia_formosa
MGP_CAROLIEiJ_G0027429Cnot6l9985.321ENSPLAG00000019862cnot6l10083.243Poecilia_latipinna
MGP_CAROLIEiJ_G0027429Cnot6l9985.550ENSPMEG00000015834cnot6l10083.243Poecilia_mexicana
MGP_CAROLIEiJ_G0027429Cnot6l9985.092ENSPREG00000003561cnot6l10083.423Poecilia_reticulata
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSPPYG00000014869CNOT6L10098.000Pongo_abelii
MGP_CAROLIEiJ_G0027429Cnot6l10067.207ENSPCAG00000016617CNOT6L9567.207Procavia_capensis
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSPCOG00000014669CNOT6L10098.018Propithecus_coquereli
MGP_CAROLIEiJ_G0027429Cnot6l8398.100ENSPVAG00000002690CNOT6L7998.100Pteropus_vampyrus
MGP_CAROLIEiJ_G0027429Cnot6l8980.879ENSPNYG00000006717cnot6l9279.722Pundamilia_nyererei
MGP_CAROLIEiJ_G0027429Cnot6l9983.945ENSPNAG00000003537cnot6l9882.065Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027429Cnot6l100100.000ENSRNOG00000002075Cnot6l100100.000Rattus_norvegicus
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSRBIG00000027644CNOT6L10098.011Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027429Cnot6l10098.182ENSRROG00000031003CNOT6L10098.182Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSSBOG00000028521CNOT6L10098.000Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027429Cnot6l10096.909ENSSHAG00000006072CNOT6L10096.577Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027429Cnot6l10082.609ENSSFOG00015019044cnot6l10082.609Scleropages_formosus
MGP_CAROLIEiJ_G0027429Cnot6l9983.486ENSSMAG00000015568cnot6l10081.081Scophthalmus_maximus
MGP_CAROLIEiJ_G0027429Cnot6l9986.009ENSSDUG00000018426cnot6l10083.784Seriola_dumerili
MGP_CAROLIEiJ_G0027429Cnot6l9985.780ENSSLDG00000000335cnot6l10083.604Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027429Cnot6l10095.273ENSSPUG00000002016CNOT6L10095.273Sphenodon_punctatus
MGP_CAROLIEiJ_G0027429Cnot6l9985.550ENSSPAG00000022932cnot6l10083.784Stegastes_partitus
MGP_CAROLIEiJ_G0027429Cnot6l10097.838ENSSSCG00000008989CNOT6L10097.838Sus_scrofa
MGP_CAROLIEiJ_G0027429Cnot6l10095.273ENSTGUG00000001737-10094.955Taeniopygia_guttata
MGP_CAROLIEiJ_G0027429Cnot6l9984.404ENSTRUG00000004332cnot6l10082.342Takifugu_rubripes
MGP_CAROLIEiJ_G0027429Cnot6l9984.174ENSTNIG00000016717cnot6l10081.261Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027429Cnot6l9992.166ENSTBEG00000016519CNOT6L9792.754Tupaia_belangeri
MGP_CAROLIEiJ_G0027429Cnot6l9997.235ENSTTRG00000005606CNOT6L10097.101Tursiops_truncatus
MGP_CAROLIEiJ_G0027429Cnot6l10098.000ENSUAMG00000026982CNOT6L10098.000Ursus_americanus
MGP_CAROLIEiJ_G0027429Cnot6l10098.018ENSUMAG00000007955CNOT6L10098.018Ursus_maritimus
MGP_CAROLIEiJ_G0027429Cnot6l10093.273ENSVPAG00000010892CNOT6L10093.309Vicugna_pacos
MGP_CAROLIEiJ_G0027429Cnot6l10098.198ENSVVUG00000024858CNOT6L10098.561Vulpes_vulpes
MGP_CAROLIEiJ_G0027429Cnot6l10089.091ENSXETG00000000372cnot6l10088.969Xenopus_tropicalis
MGP_CAROLIEiJ_G0027429Cnot6l9984.633ENSXMAG00000002900cnot6l10082.883Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us