EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027457 (Gene tree)
Gene ID: 110294903
Gene Symbol: Helq
Alias: D430018E21Rik|Hel308
Full Name: helicase%2C POLQ like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 39251 bases
Position: chr5:93699431-93738681
Accession: 110294903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0069327	ResIII	PF04851.15	1.5e-08	1	1
MGP_CAROLIEiJ_P0069325	ResIII	PF04851.15	1.9e-08	1	1
MGP_CAROLIEiJ_P0069327	DEAD	PF00270.29	4.5e-16	1	1
MGP_CAROLIEiJ_P0069325	DEAD	PF00270.29	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0069328	-	442	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069329	-	854	-	MGP_CAROLIEiJ_P0069329	172 (aa)	-	-
MGP_CAROLIEiJ_T0069326	-	984	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069327	-	2969	-	MGP_CAROLIEiJ_P0069327	971 (aa)	-	-
MGP_CAROLIEiJ_T0069325	-	3690	XM_021163368	MGP_CAROLIEiJ_P0069325	1069 (aa)	XP_021019027	UPI000A318309
MGP_CAROLIEiJ_T0069331	-	636	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069330	-	521	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069333	-	1628	-	MGP_CAROLIEiJ_P0069333	311 (aa)	-	-
MGP_CAROLIEiJ_T0069332	-	792	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069334	-	597	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027457	Helq	93	83.956	ENSG00000163312	HELQ	100	83.956	Homo_sapiens
MGP_CAROLIEiJ_G0027457	Helq	94	78.628	ENSAMEG00000004921	HELQ	100	78.728	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027457	Helq	91	55.271	ENSACIG00000020216	helq	98	55.271	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027457	Helq	93	56.452	ENSAOCG00000014323	helq	99	55.074	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027457	Helq	91	65.753	ENSAPEG00000022964	helq	90	65.753	Amphiprion_percula
MGP_CAROLIEiJ_G0027457	Helq	77	57.022	ENSAPEG00000023153	-	90	55.695	Amphiprion_percula
MGP_CAROLIEiJ_G0027457	Helq	91	60.811	ENSATEG00000023420	helq	94	57.545	Anabas_testudineus
MGP_CAROLIEiJ_G0027457	Helq	92	72.603	ENSAPLG00000012292	HELQ	95	72.603	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027457	Helq	97	71.622	ENSACAG00000010842	HELQ	92	71.622	Anolis_carolinensis
MGP_CAROLIEiJ_G0027457	Helq	99	75.159	ENSANAG00000033513	HELQ	100	75.159	Aotus_nancymaae
MGP_CAROLIEiJ_G0027457	Helq	77	62.635	ENSACLG00000010558	helq	100	62.635	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027457	Helq	90	65.714	ENSAMXG00000012252	helq	98	57.622	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027457	Helq	97	76.190	ENSBTAG00000018151	HELQ	100	74.745	Bos_taurus
MGP_CAROLIEiJ_G0027457	Helq	71	37.852	WBGene00021905	helq-1	82	37.980	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0027457	Helq	99	74.977	ENSCJAG00000005247	HELQ	100	74.977	Callithrix_jacchus
MGP_CAROLIEiJ_G0027457	Helq	95	77.680	ENSCAFG00000009108	HELQ	100	76.279	Canis_familiaris
MGP_CAROLIEiJ_G0027457	Helq	93	78.357	ENSCAFG00020010495	HELQ	100	78.357	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027457	Helq	97	75.000	ENSCHIG00000020128	HELQ	100	74.977	Capra_hircus
MGP_CAROLIEiJ_G0027457	Helq	93	72.000	ENSTSYG00000012900	HELQ	99	66.793	Carlito_syrichta
MGP_CAROLIEiJ_G0027457	Helq	98	74.525	ENSCPOG00000009180	HELQ	98	74.525	Cavia_porcellus
MGP_CAROLIEiJ_G0027457	Helq	99	75.136	ENSCCAG00000036773	HELQ	100	75.136	Cebus_capucinus
MGP_CAROLIEiJ_G0027457	Helq	99	74.705	ENSCATG00000034442	HELQ	100	74.705	Cercocebus_atys
MGP_CAROLIEiJ_G0027457	Helq	99	74.859	ENSCLAG00000004733	HELQ	99	74.765	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027457	Helq	99	74.887	ENSCSAG00000004405	HELQ	100	74.887	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027457	Helq	96	70.270	ENSCPBG00000007787	HELQ	99	65.794	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027457	Helq	72	52.246	ENSCING00000006332	-	96	52.246	Ciona_intestinalis
MGP_CAROLIEiJ_G0027457	Helq	97	77.612	ENSCANG00000002407	HELQ	100	74.796	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027457	Helq	99	82.119	ENSCGRG00001024451	Helq	99	82.119	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027457	Helq	93	85.115	ENSCGRG00000000309	Helq	99	85.115	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027457	Helq	91	63.768	ENSCVAG00000020159	helq	99	54.225	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027457	Helq	90	65.517	ENSDARG00000079818	helq	99	62.997	Danio_rerio
MGP_CAROLIEiJ_G0027457	Helq	72	43.123	FBgn0002899	mus301	76	43.123	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027457	Helq	90	80.000	ENSETEG00000012220	HELQ	85	80.000	Echinops_telfairi
MGP_CAROLIEiJ_G0027457	Helq	97	75.304	ENSEASG00005013248	HELQ	100	75.298	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027457	Helq	97	75.520	ENSECAG00000020717	HELQ	99	75.510	Equus_caballus
MGP_CAROLIEiJ_G0027457	Helq	63	81.818	ENSEEUG00000008373	-	73	78.886	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027457	Helq	94	62.667	ENSELUG00000002083	helq	99	54.241	Esox_lucius
MGP_CAROLIEiJ_G0027457	Helq	99	78.257	ENSFCAG00000009921	HELQ	100	78.444	Felis_catus
MGP_CAROLIEiJ_G0027457	Helq	85	72.973	ENSFALG00000005255	HELQ	92	72.973	Ficedula_albicollis
MGP_CAROLIEiJ_G0027457	Helq	92	79.188	ENSFDAG00000018169	HELQ	99	79.188	Fukomys_damarensis
MGP_CAROLIEiJ_G0027457	Helq	97	65.217	ENSFHEG00000015542	helq	89	65.217	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027457	Helq	78	59.760	ENSGMOG00000000020	helq	99	59.760	Gadus_morhua
MGP_CAROLIEiJ_G0027457	Helq	93	72.973	ENSGALG00000011208	HELQ	92	72.973	Gallus_gallus
MGP_CAROLIEiJ_G0027457	Helq	97	66.667	ENSGAFG00000008037	helq	89	66.667	Gambusia_affinis
MGP_CAROLIEiJ_G0027457	Helq	78	61.391	ENSGACG00000001186	helq	99	63.720	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027457	Helq	92	70.833	ENSGAGG00000015134	HELQ	99	65.669	Gopherus_agassizii
MGP_CAROLIEiJ_G0027457	Helq	97	82.609	ENSGGOG00000008598	HELQ	100	75.159	Gorilla_gorilla
MGP_CAROLIEiJ_G0027457	Helq	97	56.000	ENSHBUG00000001997	helq	99	54.943	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027457	Helq	94	77.811	ENSHGLG00000019137	HELQ	99	76.543	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027457	Helq	94	77.811	ENSHGLG00100015489	HELQ	99	76.543	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027457	Helq	98	71.429	ENSIPUG00000003800	helq	93	71.429	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027457	Helq	97	62.667	ENSKMAG00000016486	helq	99	56.286	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027457	Helq	96	59.756	ENSLBEG00000021886	helq	99	53.831	Labrus_bergylta
MGP_CAROLIEiJ_G0027457	Helq	98	61.250	ENSLACG00000010835	HELQ	98	58.007	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027457	Helq	97	65.333	ENSLOCG00000012099	helq	92	65.333	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027457	Helq	98	79.730	ENSLAFG00000001056	HELQ	100	77.230	Loxodonta_africana
MGP_CAROLIEiJ_G0027457	Helq	99	75.068	ENSMFAG00000040731	HELQ	100	75.068	Macaca_fascicularis
MGP_CAROLIEiJ_G0027457	Helq	99	74.977	ENSMMUG00000015350	HELQ	100	74.977	Macaca_mulatta
MGP_CAROLIEiJ_G0027457	Helq	99	74.977	ENSMNEG00000038829	HELQ	100	74.977	Macaca_nemestrina
MGP_CAROLIEiJ_G0027457	Helq	99	71.623	ENSMLEG00000035125	HELQ	100	71.623	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027457	Helq	97	62.667	ENSMAMG00000012364	helq	98	55.052	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027457	Helq	97	57.333	ENSMZEG00005023270	helq	99	55.038	Maylandia_zebra
MGP_CAROLIEiJ_G0027457	Helq	92	74.324	ENSMGAG00000008112	HELQ	93	74.324	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027457	Helq	88	85.124	ENSMAUG00000000249	Helq	99	85.124	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027457	Helq	100	81.946	ENSMOCG00000014354	Helq	99	81.946	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027457	Helq	83	61.644	ENSMMOG00000011313	helq	95	58.468	Mola_mola
MGP_CAROLIEiJ_G0027457	Helq	97	68.229	ENSMODG00000020774	HELQ	99	68.011	Monodelphis_domestica
MGP_CAROLIEiJ_G0027457	Helq	100	96.352	ENSMUSG00000035266	Helq	100	96.352	Mus_musculus
MGP_CAROLIEiJ_G0027457	Helq	100	92.891	MGP_PahariEiJ_G0017235	Helq	100	92.891	Mus_pahari
MGP_CAROLIEiJ_G0027457	Helq	100	97.007	MGP_SPRETEiJ_G0028454	Helq	100	97.007	Mus_spretus
MGP_CAROLIEiJ_G0027457	Helq	84	79.295	ENSMPUG00000014683	HELQ	94	79.295	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027457	Helq	96	85.135	ENSMLUG00000017053	HELQ	93	85.135	Myotis_lucifugus
MGP_CAROLIEiJ_G0027457	Helq	97	81.159	ENSNLEG00000009088	HELQ	100	75.431	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027457	Helq	78	63.082	ENSONIG00000012532	helq	100	63.082	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027457	Helq	67	73.194	ENSOANG00000002113	-	99	73.194	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027457	Helq	97	77.351	ENSOCUG00000013294	HELQ	100	77.089	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027457	Helq	77	60.996	ENSORLG00000022717	helq	85	61.071	Oryzias_latipes
MGP_CAROLIEiJ_G0027457	Helq	77	61.118	ENSORLG00015006855	helq	86	61.190	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027457	Helq	97	64.384	ENSOMEG00000004983	helq	90	64.384	Oryzias_melastigma
MGP_CAROLIEiJ_G0027457	Helq	93	71.429	ENSOGAG00000014188	HELQ	100	64.029	Otolemur_garnettii
MGP_CAROLIEiJ_G0027457	Helq	97	76.369	ENSOARG00000002630	HELQ	100	75.891	Ovis_aries
MGP_CAROLIEiJ_G0027457	Helq	99	76.190	ENSPPAG00000004520	HELQ	100	74.977	Pan_paniscus
MGP_CAROLIEiJ_G0027457	Helq	99	76.190	ENSPPRG00000010520	HELQ	100	76.047	Panthera_pardus
MGP_CAROLIEiJ_G0027457	Helq	99	76.321	ENSPTIG00000021394	HELQ	100	76.503	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027457	Helq	99	76.190	ENSPTRG00000016232	HELQ	100	74.887	Pan_troglodytes
MGP_CAROLIEiJ_G0027457	Helq	99	74.705	ENSPANG00000005130	HELQ	100	74.705	Papio_anubis
MGP_CAROLIEiJ_G0027457	Helq	97	63.514	ENSPKIG00000021702	helq	94	63.514	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027457	Helq	91	72.222	ENSPSIG00000015865	HELQ	99	66.933	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027457	Helq	91	60.606	ENSPMGG00000002986	helq	99	57.026	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027457	Helq	99	83.910	ENSPEMG00000007325	Helq	99	83.910	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027457	Helq	76	60.533	ENSPMAG00000004427	helq	100	60.849	Petromyzon_marinus
MGP_CAROLIEiJ_G0027457	Helq	94	70.337	ENSPCIG00000019746	HELQ	99	69.990	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027457	Helq	95	62.222	ENSPFOG00000002091	helq	98	54.642	Poecilia_formosa
MGP_CAROLIEiJ_G0027457	Helq	97	68.116	ENSPLAG00000015199	helq	87	68.116	Poecilia_latipinna
MGP_CAROLIEiJ_G0027457	Helq	98	68.116	ENSPMEG00000014496	helq	89	68.116	Poecilia_mexicana
MGP_CAROLIEiJ_G0027457	Helq	98	67.143	ENSPREG00000012605	helq	89	67.143	Poecilia_reticulata
MGP_CAROLIEiJ_G0027457	Helq	99	75.249	ENSPPYG00000014897	HELQ	100	75.249	Pongo_abelii
MGP_CAROLIEiJ_G0027457	Helq	79	81.429	ENSPCAG00000004842	HELQ	78	74.971	Procavia_capensis
MGP_CAROLIEiJ_G0027457	Helq	97	72.619	ENSPVAG00000006438	HELQ	100	66.606	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027457	Helq	90	53.295	ENSPNYG00000010575	helq	96	53.609	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027457	Helq	92	64.000	ENSPNAG00000009397	helq	99	57.964	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027457	Helq	99	87.453	ENSRNOG00000002181	Helq	99	87.453	Rattus_norvegicus
MGP_CAROLIEiJ_G0027457	Helq	97	77.612	ENSRBIG00000041497	HELQ	100	74.615	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027457	Helq	97	77.612	ENSRROG00000045128	HELQ	100	74.705	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027457	Helq	99	77.538	ENSSBOG00000034314	HELQ	100	77.538	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027457	Helq	99	69.541	ENSSHAG00000006446	HELQ	100	69.541	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027457	Helq	77	67.606	ENSSFOG00015019460	helq	95	61.955	Scleropages_formosus
MGP_CAROLIEiJ_G0027457	Helq	97	57.895	ENSSDUG00000015665	helq	99	55.629	Seriola_dumerili
MGP_CAROLIEiJ_G0027457	Helq	85	78.524	ENSSARG00000013932	HELQ	98	78.524	Sorex_araneus
MGP_CAROLIEiJ_G0027457	Helq	79	57.346	ENSSPAG00000008705	helq	85	57.244	Stegastes_partitus
MGP_CAROLIEiJ_G0027457	Helq	99	75.046	ENSSSCG00000009236	HELQ	100	75.551	Sus_scrofa
MGP_CAROLIEiJ_G0027457	Helq	92	68.919	ENSTGUG00000002154	HELQ	100	62.988	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027457	Helq	97	55.405	ENSTRUG00000018644	helq	99	55.081	Takifugu_rubripes
MGP_CAROLIEiJ_G0027457	Helq	79	61.091	ENSTNIG00000005673	helq	100	61.091	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027457	Helq	99	76.190	ENSTTRG00000004895	HELQ	100	74.955	Tursiops_truncatus
MGP_CAROLIEiJ_G0027457	Helq	98	75.758	ENSUAMG00000012816	HELQ	100	74.954	Ursus_americanus
MGP_CAROLIEiJ_G0027457	Helq	97	77.085	ENSUMAG00000008823	HELQ	100	76.707	Ursus_maritimus
MGP_CAROLIEiJ_G0027457	Helq	99	72.619	ENSVPAG00000011357	HELQ	100	71.351	Vicugna_pacos
MGP_CAROLIEiJ_G0027457	Helq	95	77.984	ENSVVUG00000015676	HELQ	100	76.707	Vulpes_vulpes
MGP_CAROLIEiJ_G0027457	Helq	76	71.233	ENSXETG00000001831	helq	100	66.786	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027457	Helq	75	65.079	ENSXCOG00000016210	helq	99	61.825	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0027457	Helq	75	65.079	ENSXMAG00000012563	helq	99	61.825	Xiphophorus_maculatus