EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027458 (Gene tree)
Gene ID: 110294449
Gene Symbol: Mrps18c
Alias: 1110037D14Rik
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5311 bases
Position: chr5:93738826-93744136
Accession: 110294449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0069337	Ribosomal_S18	PF01084.20	3.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0069335	-	255	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0069337	-	432	-	MGP_CAROLIEiJ_P0069337	143 (aa)	XP_021018351	UPI000A315F11
MGP_CAROLIEiJ_T0069336	-	457	-	MGP_CAROLIEiJ_P0069336	42 (aa)	-	-
MGP_CAROLIEiJ_T0069338	-	258	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0027458	Mrps18c	85	31.579	MGP_CAROLIEiJ_G0021656	Mrps18a	87	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSG00000163319	MRPS18C	100	78.767	Homo_sapiens
MGP_CAROLIEiJ_G0027458	Mrps18c	100	70.548	ENSAMEG00000004915	MRPS18C	100	70.548	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027458	Mrps18c	99	67.105	ENSANAG00000025323	-	95	67.105	Aotus_nancymaae
MGP_CAROLIEiJ_G0027458	Mrps18c	100	67.808	ENSANAG00000028055	-	100	67.808	Aotus_nancymaae
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.137	ENSBTAG00000018155	MRPS18C	100	80.137	Bos_taurus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	54.110	ENSBTAG00000049836	-	100	54.110	Bos_taurus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	ENSCJAG00000042247	MRPS18C	97	78.082	Callithrix_jacchus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.137	ENSCAFG00020010491	MRPS18C	100	80.137	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027458	Mrps18c	88	85.714	ENSCHIG00000004461	-	86	85.714	Capra_hircus
MGP_CAROLIEiJ_G0027458	Mrps18c	99	62.329	ENSCHIG00000018805	-	99	62.329	Capra_hircus
MGP_CAROLIEiJ_G0027458	Mrps18c	75	71.963	ENSCHIG00000019359	-	98	71.963	Capra_hircus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	50.000	ENSCHIG00000016551	-	100	50.000	Capra_hircus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	68.493	ENSCHIG00000022740	-	100	68.493	Capra_hircus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	ENSTSYG00000012924	MRPS18C	100	76.027	Carlito_syrichta
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.712	ENSCPOG00000009198	MRPS18C	100	76.712	Cavia_porcellus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	77.397	ENSCCAG00000019347	-	100	77.397	Cebus_capucinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	70.629	ENSCCAG00000028283	-	100	70.629	Cebus_capucinus
MGP_CAROLIEiJ_G0027458	Mrps18c	99	66.207	ENSCCAG00000025155	-	95	66.207	Cebus_capucinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	ENSCCAG00000026577	-	100	78.082	Cebus_capucinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSCATG00000040697	MRPS18C	100	79.452	Cercocebus_atys
MGP_CAROLIEiJ_G0027458	Mrps18c	100	77.397	ENSCLAG00000008205	-	100	77.397	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	ENSCLAG00000017397	-	100	76.027	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027458	Mrps18c	100	67.808	ENSCANG00000041165	-	100	67.808	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSCANG00000038907	MRPS18C	100	79.452	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027458	Mrps18c	99	57.343	ENSCANG00000037347	-	100	55.245	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.217	ENSCGRG00001000103	Mrps18c	100	83.217	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.217	ENSCGRG00000002192	Mrps18c	100	83.217	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027458	Mrps18c	99	79.861	ENSDORG00000012749	Mrps18c	100	79.861	Dipodomys_ordii
MGP_CAROLIEiJ_G0027458	Mrps18c	100	52.740	ENSETEG00000012223	-	100	52.740	Echinops_telfairi
MGP_CAROLIEiJ_G0027458	Mrps18c	100	82.759	ENSEASG00005013234	MRPS18C	100	82.759	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.448	ENSECAG00000020387	MRPS18C	100	83.448	Equus_caballus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	59.184	ENSEEUG00000003504	MRPS18C	99	59.184	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	ENSFCAG00000042464	MRPS18C	100	80.822	Felis_catus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	ENSFDAG00000000250	-	100	76.027	Fukomys_damarensis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	64.384	ENSFDAG00000008778	-	100	64.384	Fukomys_damarensis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	53.425	ENSGGOG00000037903	-	100	53.425	Gorilla_gorilla
MGP_CAROLIEiJ_G0027458	Mrps18c	100	58.219	ENSGGOG00000040785	-	100	58.219	Gorilla_gorilla
MGP_CAROLIEiJ_G0027458	Mrps18c	100	64.384	ENSGGOG00000008603	MRPS18C	100	64.384	Gorilla_gorilla
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	ENSHGLG00000002953	-	100	78.082	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027458	Mrps18c	100	71.329	ENSHGLG00000012671	-	98	71.329	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027458	Mrps18c	100	71.918	ENSHGLG00000020134	-	100	71.918	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	ENSHGLG00100016235	-	100	78.082	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027458	Mrps18c	100	71.918	ENSHGLG00100019678	-	100	71.918	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027458	Mrps18c	100	71.329	ENSHGLG00100015568	-	98	71.329	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027458	Mrps18c	100	77.241	ENSSTOG00000007989	MRPS18C	100	77.241	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027458	Mrps18c	50	86.111	ENSJJAG00000022437	Mrps18c	74	86.111	Jaculus_jaculus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	ENSLAFG00000001059	MRPS18C	100	76.027	Loxodonta_africana
MGP_CAROLIEiJ_G0027458	Mrps18c	100	62.329	ENSMFAG00000041276	-	100	62.329	Macaca_fascicularis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSMFAG00000003991	MRPS18C	100	78.767	Macaca_fascicularis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	67.808	ENSMMUG00000039146	-	100	67.808	Macaca_mulatta
MGP_CAROLIEiJ_G0027458	Mrps18c	100	69.863	ENSMMUG00000048717	-	100	69.863	Macaca_mulatta
MGP_CAROLIEiJ_G0027458	Mrps18c	100	61.644	ENSMMUG00000015353	MRPS18C	100	61.644	Macaca_mulatta
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSMNEG00000043663	MRPS18C	100	78.767	Macaca_nemestrina
MGP_CAROLIEiJ_G0027458	Mrps18c	100	58.904	ENSMNEG00000018700	-	100	58.904	Macaca_nemestrina
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSMLEG00000038884	MRPS18C	100	79.452	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	60.959	ENSMICG00000037615	-	100	60.959	Microcebus_murinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSMICG00000032609	-	100	78.767	Microcebus_murinus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.217	ENSMOCG00000009898	-	100	83.217	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027458	Mrps18c	100	85.315	ENSMOCG00000015591	-	100	85.315	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027458	Mrps18c	97	68.531	ENSMODG00000020773	MRPS18C	99	68.531	Monodelphis_domestica
MGP_CAROLIEiJ_G0027458	Mrps18c	100	95.105	ENSMUSG00000016833	Mrps18c	100	95.105	Mus_musculus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	97.203	MGP_PahariEiJ_G0017236	Mrps18c	100	97.203	Mus_pahari
MGP_CAROLIEiJ_G0027458	Mrps18c	83	95.798	MGP_SPRETEiJ_G0028455	Mrps18c	93	95.798	Mus_spretus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.351	ENSMLUG00000017057	MRPS18C	100	76.351	Myotis_lucifugus
MGP_CAROLIEiJ_G0027458	Mrps18c	91	83.077	ENSNGAG00000015980	Mrps18c	100	81.119	Nannospalax_galili
MGP_CAROLIEiJ_G0027458	Mrps18c	100	71.918	ENSNLEG00000018188	-	100	71.918	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSNLEG00000009119	MRPS18C	100	78.767	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027458	Mrps18c	69	72.000	ENSOPRG00000004113	MRPS18C	68	72.000	Ochotona_princeps
MGP_CAROLIEiJ_G0027458	Mrps18c	100	76.027	ENSODEG00000020349	-	100	76.027	Octodon_degus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	75.342	ENSODEG00000007599	-	100	75.342	Octodon_degus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.082	ENSOARG00000002770	MRPS18C	100	78.082	Ovis_aries
MGP_CAROLIEiJ_G0027458	Mrps18c	100	54.795	ENSPPAG00000037400	-	100	54.795	Pan_paniscus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSPPAG00000037122	MRPS18C	100	78.767	Pan_paniscus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.137	ENSPPRG00000011089	MRPS18C	100	80.137	Panthera_pardus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSPTIG00000021242	MRPS18C	100	79.452	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSPTRG00000016233	MRPS18C	100	78.767	Pan_troglodytes
MGP_CAROLIEiJ_G0027458	Mrps18c	100	52.740	ENSPTRG00000047058	-	100	52.740	Pan_troglodytes
MGP_CAROLIEiJ_G0027458	Mrps18c	100	67.808	ENSPANG00000034202	-	100	67.808	Papio_anubis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSPANG00000033931	MRPS18C	100	78.767	Papio_anubis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.916	ENSPEMG00000008390	Mrps18c	100	83.916	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027458	Mrps18c	71	84.314	ENSPCIG00000019737	-	100	84.314	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027458	Mrps18c	98	58.865	ENSPCIG00000000097	-	99	58.865	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027458	Mrps18c	99	68.310	ENSPCIG00000005376	-	100	68.310	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.137	ENSPPYG00000025867	MRPS18C	100	80.137	Pongo_abelii
MGP_CAROLIEiJ_G0027458	Mrps18c	99	75.000	ENSPPYG00000025835	-	99	75.000	Pongo_abelii
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSPCAG00000004975	MRPS18C	100	79.452	Procavia_capensis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	ENSPCOG00000017634	MRPS18C	100	80.822	Propithecus_coquereli
MGP_CAROLIEiJ_G0027458	Mrps18c	69	73.267	ENSPVAG00000006439	MRPS18C	100	73.267	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	90.909	ENSRNOG00000002178	Mrps18c	100	90.909	Rattus_norvegicus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	54.110	ENSRBIG00000031637	-	100	54.110	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027458	Mrps18c	100	70.629	ENSRBIG00000035023	-	100	70.629	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSRBIG00000041685	MRPS18C	100	79.452	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027458	Mrps18c	100	70.629	ENSRROG00000033834	-	100	70.629	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027458	Mrps18c	100	53.425	ENSRROG00000030722	-	100	53.425	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSRROG00000044334	MRPS18C	100	79.452	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSSBOG00000027568	-	100	78.767	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027458	Mrps18c	99	71.034	ENSSBOG00000022205	-	92	71.034	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027458	Mrps18c	100	60.839	ENSSBOG00000029234	-	100	60.839	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027458	Mrps18c	99	63.380	ENSSBOG00000032292	-	100	63.380	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027458	Mrps18c	81	83.621	ENSSHAG00000007084	MRPS18C	80	83.621	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSSSCG00000038042	MRPS18C	100	78.767	Sus_scrofa
MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	ENSTBEG00000012505	MRPS18C	100	78.767	Tupaia_belangeri
MGP_CAROLIEiJ_G0027458	Mrps18c	100	82.192	ENSTTRG00000004897	MRPS18C	100	82.192	Tursiops_truncatus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	ENSUAMG00000012878	MRPS18C	100	80.822	Ursus_americanus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	ENSUMAG00000008829	MRPS18C	100	80.822	Ursus_maritimus
MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	ENSVPAG00000011358	MRPS18C	100	80.822	Vicugna_pacos
MGP_CAROLIEiJ_G0027458	Mrps18c	100	79.452	ENSVVUG00000015672	MRPS18C	100	79.452	Vulpes_vulpes