EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0027482 (Gene tree)
Gene ID
-
Gene Symbol
BC005561
Alias
-
Full Name
cDNA sequence BC005561
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
13924 bases
Position
chr5:97310175-97324098
Accession
3040669
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0069436Tho2PF11262.83.5e-10011
MGP_CAROLIEiJ_P0069436Thoc2PF11732.82.7e-3611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0069436-5403-MGP_CAROLIEiJ_P00694361587 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0027482's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027482's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0027482BC0055619987.437MGP_CAROLIEiJ_G0033023Thoc210088.715
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0027482BC0055619989.071ENSG00000125676THOC210089.586Homo_sapiens
MGP_CAROLIEiJ_G0027482BC0055619971.231ENSAPOG00000003459thoc29971.276Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027482BC0055619988.534ENSAMEG00000014841THOC210089.105Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027482BC0055618871.378ENSACIG00000015022thoc29970.830Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027482BC0055619868.906ENSAOCG00000013305thoc29573.231Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027482BC0055619868.906ENSAPEG00000004792thoc29573.231Amphiprion_percula
MGP_CAROLIEiJ_G0027482BC0055619970.391ENSATEG00000013110thoc29970.440Anabas_testudineus
MGP_CAROLIEiJ_G0027482BC0055619582.500ENSAPLG00000010614THOC210082.566Anas_platyrhynchos
MGP_CAROLIEiJ_G0027482BC0055619980.162ENSACAG00000011585THOC29980.846Anolis_carolinensis
MGP_CAROLIEiJ_G0027482BC0055619985.389ENSANAG00000034037-9986.747Aotus_nancymaae
MGP_CAROLIEiJ_G0027482BC0055619987.194ENSANAG00000022505-10088.018Aotus_nancymaae
MGP_CAROLIEiJ_G0027482BC0055619569.094ENSACLG00000012036thoc210068.173Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027482BC0055619968.885ENSAMXG00000014184thoc29969.426Astyanax_mexicanus
MGP_CAROLIEiJ_G0027482BC0055619989.014ENSBTAG00000008388THOC210089.335Bos_taurus
MGP_CAROLIEiJ_G0027482BC0055619887.380ENSBTAG00000047341-9887.508Bos_taurus
MGP_CAROLIEiJ_G0027482BC0055618732.560WBGene00015813thoc-28034.169Caenorhabditis_elegans
MGP_CAROLIEiJ_G0027482BC0055619988.377ENSCJAG00000016157THOC210088.959Callithrix_jacchus
MGP_CAROLIEiJ_G0027482BC0055619989.077ENSCAFG00000018574THOC210089.649Canis_familiaris
MGP_CAROLIEiJ_G0027482BC0055619988.973ENSCAFG00020002284THOC29989.043Canis_lupus_dingo
MGP_CAROLIEiJ_G0027482BC0055619988.896ENSCHIG00000017733-9988.966Capra_hircus
MGP_CAROLIEiJ_G0027482BC0055619887.813ENSCHIG00000025851-9988.582Capra_hircus
MGP_CAROLIEiJ_G0027482BC0055619987.256ENSTSYG00000012292THOC210087.171Carlito_syrichta
MGP_CAROLIEiJ_G0027482BC0055619986.129ENSCPOG00000038670THOC29986.570Cavia_porcellus
MGP_CAROLIEiJ_G0027482BC0055619988.882ENSCCAG00000021906THOC210089.460Cebus_capucinus
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSCATG00000003183THOC210089.649Cercocebus_atys
MGP_CAROLIEiJ_G0027482BC0055619988.701ENSCLAG00000002641THOC210089.210Chinchilla_lanigera
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSCSAG00000018332THOC210089.649Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027482BC0055619881.672ENSCPBG00000012863THOC29985.782Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027482BC0055617557.263ENSCING00000007364-9957.095Ciona_intestinalis
MGP_CAROLIEiJ_G0027482BC0055616259.681ENSCSAVG00000007923-10076.596Ciona_savignyi
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSCANG00000035077THOC210089.649Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027482BC00556110093.455ENSCGRG00001009811BC0055619993.581Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027482BC0055619986.578ENSCGRG00001015509Thoc210086.868Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027482BC00556110093.518ENSCGRG00000000980BC00556110093.644Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027482BC0055619885.029ENSCGRG00000001226Thoc29986.061Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027482BC0055618772.274ENSCSEG00000019946thoc210071.727Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027482BC0055619968.236ENSCVAG00000021509thoc29968.302Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027482BC0055619971.276ENSDARG00000037503thoc29971.150Danio_rerio
MGP_CAROLIEiJ_G0027482BC0055619985.875ENSDNOG00000012487THOC210087.508Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027482BC0055619540.855FBgn0031390tho27446.850Drosophila_melanogaster
MGP_CAROLIEiJ_G0027482BC0055618879.474ENSETEG00000016183THOC29180.245Echinops_telfairi
MGP_CAROLIEiJ_G0027482BC0055619589.307ENSEASG00005017399THOC210089.901Equus_asinus_asinus
MGP_CAROLIEiJ_G0027482BC0055619988.959ENSECAG00000010431THOC210089.551Equus_caballus
MGP_CAROLIEiJ_G0027482BC0055617395.469ENSEEUG00000015598THOC27895.469Erinaceus_europaeus
MGP_CAROLIEiJ_G0027482BC0055619072.911ENSELUG00000007778thoc29672.477Esox_lucius
MGP_CAROLIEiJ_G0027482BC0055619988.763ENSFCAG00000008301THOC210089.460Felis_catus
MGP_CAROLIEiJ_G0027482BC0055619980.459ENSFALG00000001519THOC29980.707Ficedula_albicollis
MGP_CAROLIEiJ_G0027482BC0055619889.108ENSFDAG00000017237THOC210089.624Fukomys_damarensis
MGP_CAROLIEiJ_G0027482BC0055619967.423ENSFHEG00000001695thoc29967.781Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027482BC0055619469.574ENSGMOG00000000069thoc29967.931Gadus_morhua
MGP_CAROLIEiJ_G0027482BC0055619182.752ENSGALG00000008507THOC29882.615Gallus_gallus
MGP_CAROLIEiJ_G0027482BC0055619769.638ENSGAFG00000005902thoc210069.077Gambusia_affinis
MGP_CAROLIEiJ_G0027482BC0055619569.557ENSGACG00000020367thoc29968.394Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027482BC0055619882.330ENSGAGG00000024263THOC29982.586Gopherus_agassizii
MGP_CAROLIEiJ_G0027482BC0055619989.071ENSGGOG00000000486THOC210089.586Gorilla_gorilla
MGP_CAROLIEiJ_G0027482BC0055619272.609ENSHBUG00000003516thoc29872.497Haplochromis_burtoni
MGP_CAROLIEiJ_G0027482BC0055619988.088ENSHGLG00000004222THOC210088.903Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027482BC0055619390.188ENSHGLG00100011595THOC29390.600Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027482BC0055619770.058ENSHCOG00000006276thoc29969.994Hippocampus_comes
MGP_CAROLIEiJ_G0027482BC0055619970.596ENSIPUG00000015876thoc29970.533Ictalurus_punctatus
MGP_CAROLIEiJ_G0027482BC0055619988.959ENSSTOG00000009134THOC210089.467Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027482BC00556110087.500ENSJJAG00000008784BC00556110088.512Jaculus_jaculus
MGP_CAROLIEiJ_G0027482BC0055619987.516ENSJJAG00000017282Thoc210088.652Jaculus_jaculus
MGP_CAROLIEiJ_G0027482BC0055619567.717ENSKMAG00000012263thoc29973.018Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027482BC0055619970.150ENSLBEG00000003049thoc29872.147Labrus_bergylta
MGP_CAROLIEiJ_G0027482BC0055619878.860ENSLACG00000016494THOC29979.180Latimeria_chalumnae
MGP_CAROLIEiJ_G0027482BC0055619975.992ENSLOCG00000014546thoc29976.103Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027482BC0055619988.512ENSLAFG00000003146THOC210088.833Loxodonta_africana
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSMFAG00000042215THOC210089.649Macaca_fascicularis
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSMMUG00000003745THOC210089.649Macaca_mulatta
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSMNEG00000033627THOC210089.649Macaca_nemestrina
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSMLEG00000034817THOC210089.649Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027482BC0055619570.669ENSMAMG00000012993thoc29574.652Mastacembelus_armatus
MGP_CAROLIEiJ_G0027482BC0055619971.294ENSMZEG00005015842thoc29971.150Maylandia_zebra
MGP_CAROLIEiJ_G0027482BC0055619881.524ENSMGAG00000007345THOC210081.599Meleagris_gallopavo
MGP_CAROLIEiJ_G0027482BC0055619987.942ENSMAUG00000002356Thoc210088.464Mesocricetus_auratus
MGP_CAROLIEiJ_G0027482BC0055619988.010ENSMICG00000011840THOC210089.523Microcebus_murinus
MGP_CAROLIEiJ_G0027482BC00556110092.889ENSMOCG00000019406BC00556110093.014Microtus_ochrogaster
MGP_CAROLIEiJ_G0027482BC0055619987.390ENSMOCG00000009946Thoc210088.276Microtus_ochrogaster
MGP_CAROLIEiJ_G0027482BC0055619868.806ENSMMOG00000016313thoc29672.720Mola_mola
MGP_CAROLIEiJ_G0027482BC0055619979.963ENSMODG00000014984THOC29980.774Monodelphis_domestica
MGP_CAROLIEiJ_G0027482BC0055619868.307ENSMALG00000019718thoc29967.649Monopterus_albus
MGP_CAROLIEiJ_G0027482BC0055619987.563ENSMUSG00000037475Thoc210088.840Mus_musculus
MGP_CAROLIEiJ_G0027482BC00556110099.182ENSMUSG00000079065BC00556110099.182Mus_musculus
MGP_CAROLIEiJ_G0027482BC0055619987.563MGP_PahariEiJ_G0031569Thoc210088.840Mus_pahari
MGP_CAROLIEiJ_G0027482BC00556110097.294MGP_PahariEiJ_G0017260BC00556110097.294Mus_pahari
MGP_CAROLIEiJ_G0027482BC00556110099.308MGP_SPRETEiJ_G0028479BC00556110099.308Mus_spretus
MGP_CAROLIEiJ_G0027482BC0055619987.563MGP_SPRETEiJ_G0034181Thoc210088.840Mus_spretus
MGP_CAROLIEiJ_G0027482BC0055619988.570ENSMPUG00000001357THOC210089.139Mustela_putorius_furo
MGP_CAROLIEiJ_G0027482BC0055619579.707ENSMLUG00000026072-10079.774Myotis_lucifugus
MGP_CAROLIEiJ_G0027482BC0055619888.430ENSMLUG00000013656-10089.199Myotis_lucifugus
MGP_CAROLIEiJ_G0027482BC0055619085.636ENSMLUG00000027559-9986.513Myotis_lucifugus
MGP_CAROLIEiJ_G0027482BC0055619475.618ENSMLUG00000028256-9975.318Myotis_lucifugus
MGP_CAROLIEiJ_G0027482BC0055619987.312ENSNGAG00000016184Thoc210087.945Nannospalax_galili
MGP_CAROLIEiJ_G0027482BC00556110089.761ENSNGAG00000010936BC00556110089.761Nannospalax_galili
MGP_CAROLIEiJ_G0027482BC0055619071.319ENSNBRG00000018089thoc29970.963Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027482BC0055619982.793ENSNLEG00000015055THOC210083.489Nomascus_leucogenys
MGP_CAROLIEiJ_G0027482BC0055618283.526ENSMEUG00000003533THOC28183.526Notamacropus_eugenii
MGP_CAROLIEiJ_G0027482BC0055619988.699ENSODEG00000002478THOC210089.154Octodon_degus
MGP_CAROLIEiJ_G0027482BC0055619971.393ENSONIG00000004348thoc29971.249Oreochromis_niloticus
MGP_CAROLIEiJ_G0027482BC0055619781.871ENSOANG00000004054THOC210082.703Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027482BC0055619988.512ENSOCUG00000005996THOC210088.582Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027482BC0055619970.540ENSORLG00000008692thoc29970.333Oryzias_latipes
MGP_CAROLIEiJ_G0027482BC0055619968.319ENSORLG00020002321thoc29374.961Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027482BC0055619969.221ENSORLG00015000665thoc29872.242Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027482BC0055619970.347ENSOMEG00000004006thoc29970.013Oryzias_melastigma
MGP_CAROLIEiJ_G0027482BC0055619987.947ENSOGAG00000000302THOC210089.586Otolemur_garnettii
MGP_CAROLIEiJ_G0027482BC0055619889.165ENSOARG00000013665-10089.490Ovis_aries
MGP_CAROLIEiJ_G0027482BC0055617692.063ENSOARG00000003614-9692.063Ovis_aries
MGP_CAROLIEiJ_G0027482BC0055619986.658ENSPPAG00000040720THOC29990.144Pan_paniscus
MGP_CAROLIEiJ_G0027482BC0055619988.701ENSPPRG00000023137THOC210089.398Panthera_pardus
MGP_CAROLIEiJ_G0027482BC0055619987.563ENSPTIG00000006983THOC210087.508Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027482BC0055619988.952ENSPTRG00000022246THOC210089.649Pan_troglodytes
MGP_CAROLIEiJ_G0027482BC0055619886.277ENSPANG00000004038THOC210086.984Papio_anubis
MGP_CAROLIEiJ_G0027482BC0055619374.146ENSPKIG00000021719thoc29474.815Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027482BC0055619981.320ENSPSIG00000015352THOC29881.943Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027482BC0055619866.474ENSPMGG00000002688thoc29966.795Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027482BC0055619987.571ENSPEMG00000007626Thoc210088.095Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027482BC00556110094.210ENSPEMG00000011125BC00556110094.336Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027482BC0055619961.732ENSPMAG00000007219-9972.847Petromyzon_marinus
MGP_CAROLIEiJ_G0027482BC0055616286.626ENSPCIG00000007574THOC29987.742Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027482BC0055619970.373ENSPFOG00000019556thoc29969.975Poecilia_formosa
MGP_CAROLIEiJ_G0027482BC0055619968.550ENSPLAG00000005761thoc29968.405Poecilia_latipinna
MGP_CAROLIEiJ_G0027482BC0055619968.527ENSPMEG00000002951thoc29968.467Poecilia_mexicana
MGP_CAROLIEiJ_G0027482BC0055619970.629ENSPREG00000021746thoc29970.314Poecilia_reticulata
MGP_CAROLIEiJ_G0027482BC0055619989.071ENSPPYG00000020695THOC210089.586Pongo_abelii
MGP_CAROLIEiJ_G0027482BC0055619975.611ENSPCAG00000005402THOC210075.486Procavia_capensis
MGP_CAROLIEiJ_G0027482BC0055619984.591ENSPCOG00000001806THOC29986.172Propithecus_coquereli
MGP_CAROLIEiJ_G0027482BC0055619987.947ENSPVAG00000006132THOC210088.269Pteropus_vampyrus
MGP_CAROLIEiJ_G0027482BC0055619569.382ENSPNYG00000019622thoc210068.455Pundamilia_nyererei
MGP_CAROLIEiJ_G0027482BC0055619967.544ENSPNAG00000020593thoc29967.484Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027482BC0055619997.417ENSRNOG00000042340LOC67989410097.417Rattus_norvegicus
MGP_CAROLIEiJ_G0027482BC0055619988.018ENSRNOG00000007315Thoc210088.903Rattus_norvegicus
MGP_CAROLIEiJ_G0027482BC0055619278.163ENSRBIG00000044129THOC29886.646Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027482BC0055619989.135ENSRROG00000041515THOC210089.649Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027482BC0055619988.819ENSSBOG00000007245THOC210089.460Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027482BC0055619880.571ENSSHAG00000015987THOC210081.460Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027482BC0055619974.953ENSSFOG00015004767THOC29974.763Scleropages_formosus
MGP_CAROLIEiJ_G0027482BC0055619972.431ENSSFOG00015010127thoc29875.744Scleropages_formosus
MGP_CAROLIEiJ_G0027482BC0055619970.647ENSSMAG00000016574thoc29970.695Scophthalmus_maximus
MGP_CAROLIEiJ_G0027482BC0055619971.357ENSSDUG00000012815thoc29972.566Seriola_dumerili
MGP_CAROLIEiJ_G0027482BC0055619971.168ENSSLDG00000015816thoc29971.339Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027482BC0055619583.388ENSSARG00000005799THOC210083.992Sorex_araneus
MGP_CAROLIEiJ_G0027482BC0055619981.017ENSSPUG00000012889THOC210081.576Sphenodon_punctatus
MGP_CAROLIEiJ_G0027482BC0055618175.077ENSSPAG00000023593thoc29174.462Stegastes_partitus
MGP_CAROLIEiJ_G0027482BC0055619988.568ENSSSCG00000012639THOC210089.517Sus_scrofa
MGP_CAROLIEiJ_G0027482BC0055619282.529ENSTGUG00000003682THOC210082.937Taeniopygia_guttata
MGP_CAROLIEiJ_G0027482BC0055619969.153ENSTRUG00000015122thoc29968.892Takifugu_rubripes
MGP_CAROLIEiJ_G0027482BC0055619469.062ENSTNIG00000011794thoc29768.920Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027482BC0055615793.388ENSTBEG00000005854-6093.388Tupaia_belangeri
MGP_CAROLIEiJ_G0027482BC0055618282.706ENSTBEG00000004420-10083.500Tupaia_belangeri
MGP_CAROLIEiJ_G0027482BC0055619982.058ENSTTRG00000002762THOC210084.314Tursiops_truncatus
MGP_CAROLIEiJ_G0027482BC0055619988.896ENSUAMG00000008780THOC29989.269Ursus_americanus
MGP_CAROLIEiJ_G0027482BC0055619680.822ENSUMAG00000024014THOC29887.238Ursus_maritimus
MGP_CAROLIEiJ_G0027482BC0055619888.974ENSVPAG00000006247THOC210089.682Vicugna_pacos
MGP_CAROLIEiJ_G0027482BC0055619988.959ENSVVUG00000028282THOC29989.029Vulpes_vulpes
MGP_CAROLIEiJ_G0027482BC0055619975.907ENSXETG00000016195thoc29988.274Xenopus_tropicalis
MGP_CAROLIEiJ_G0027482BC0055619769.221ENSXCOG00000006301thoc210069.008Xiphophorus_couchianus
MGP_CAROLIEiJ_G0027482BC0055619769.265ENSXMAG00000011604thoc29970.697Xiphophorus_maculatus

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