EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027618 (Gene tree)
Gene ID: 110295024
Gene Symbol: Pop5
Alias: 1500019J17Rik|2700077E03Rik|Rnasep3
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 10153 bases
Position: chr5:108174720-108184872
Accession: 110295024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070109	RNase_P_Rpp14	PF01900.19	6.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070109	-	1007	XM_021163468	MGP_CAROLIEiJ_P0070109	169 (aa)	XP_021019127	UPI00000E7ED2
MGP_CAROLIEiJ_T0070113	-	522	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070112	-	559	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070111	-	1591	-	MGP_CAROLIEiJ_P0070111	169 (aa)	-	UPI00000E7ED2
MGP_CAROLIEiJ_T0070110	-	380	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070114	-	412	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSG00000167272	POP5	100	86.982	Homo_sapiens
MGP_CAROLIEiJ_G0027618	Pop5	84	54.225	ENSAPOG00000023686	POP5	99	50.602	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027618	Pop5	100	83.721	ENSAMEG00000008503	POP5	100	83.721	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027618	Pop5	84	54.930	ENSACIG00000018362	pop5	99	52.121	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027618	Pop5	84	53.521	ENSAOCG00000001930	pop5	99	50.909	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027618	Pop5	84	53.521	ENSAPEG00000006795	pop5	99	50.909	Amphiprion_percula
MGP_CAROLIEiJ_G0027618	Pop5	91	53.247	ENSATEG00000016792	pop5	99	51.205	Anabas_testudineus
MGP_CAROLIEiJ_G0027618	Pop5	53	74.157	ENSAPLG00000015761	POP5	100	67.257	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027618	Pop5	96	56.173	ENSACAG00000003091	POP5	97	56.173	Anolis_carolinensis
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSANAG00000023744	POP5	100	85.799	Aotus_nancymaae
MGP_CAROLIEiJ_G0027618	Pop5	89	53.642	ENSACLG00000021131	-	99	53.012	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027618	Pop5	89	53.642	ENSAMXG00000038175	pop5	94	50.307	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	ENSBTAG00000005385	POP5	100	85.294	Bos_taurus
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSCJAG00000001309	POP5	100	85.799	Callithrix_jacchus
MGP_CAROLIEiJ_G0027618	Pop5	100	85.882	ENSCAFG00000010389	POP5	100	85.882	Canis_familiaris
MGP_CAROLIEiJ_G0027618	Pop5	100	85.882	ENSCAFG00020020663	POP5	100	85.882	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027618	Pop5	100	86.471	ENSCHIG00000016402	POP5	100	86.471	Capra_hircus
MGP_CAROLIEiJ_G0027618	Pop5	100	88.166	ENSTSYG00000027616	POP5	100	88.166	Carlito_syrichta
MGP_CAROLIEiJ_G0027618	Pop5	67	85.088	ENSCAPG00000016873	POP5	100	85.088	Cavia_aperea
MGP_CAROLIEiJ_G0027618	Pop5	100	85.799	ENSCPOG00000012337	POP5	100	85.799	Cavia_porcellus
MGP_CAROLIEiJ_G0027618	Pop5	88	91.892	ENSCCAG00000023154	POP5	100	84.615	Cebus_capucinus
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSCATG00000036825	POP5	100	86.391	Cercocebus_atys
MGP_CAROLIEiJ_G0027618	Pop5	100	88.757	ENSCLAG00000007808	POP5	100	88.757	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSCSAG00000002246	POP5	100	86.391	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027618	Pop5	86	74.483	ENSCHOG00000013969	POP5	100	71.176	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0027618	Pop5	96	67.485	ENSCPBG00000011331	POP5	96	67.485	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSCANG00000028001	POP5	100	85.799	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027618	Pop5	100	94.083	ENSCGRG00001017974	Pop5	100	94.083	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027618	Pop5	100	94.083	ENSCGRG00000010102	Pop5	100	94.083	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027618	Pop5	81	56.934	ENSCSEG00000011103	pop5	91	56.934	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027618	Pop5	91	53.247	ENSCSEG00000008332	-	99	52.096	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027618	Pop5	90	39.869	ENSCVAG00000009152	-	90	39.216	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027618	Pop5	88	54.605	ENSDARG00000053452	pop5	98	52.976	Danio_rerio
MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	ENSDNOG00000045952	-	100	86.471	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027618	Pop5	100	84.302	ENSDNOG00000012668	-	90	85.465	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027618	Pop5	100	87.574	ENSDORG00000029401	Pop5	100	87.574	Dipodomys_ordii
MGP_CAROLIEiJ_G0027618	Pop5	84	30.282	FBgn0036696	CG14057	95	30.282	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027618	Pop5	99	83.234	ENSETEG00000009283	POP5	99	83.234	Echinops_telfairi
MGP_CAROLIEiJ_G0027618	Pop5	87	40.816	ENSEBUG00000016369	pop5	90	40.816	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027618	Pop5	100	84.706	ENSEASG00005004714	POP5	100	85.882	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027618	Pop5	100	84.706	ENSECAG00000010012	POP5	100	85.882	Equus_caballus
MGP_CAROLIEiJ_G0027618	Pop5	96	53.374	ENSELUG00000023394	pop5	100	53.374	Esox_lucius
MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	ENSFCAG00000042614	POP5	100	85.294	Felis_catus
MGP_CAROLIEiJ_G0027618	Pop5	89	68.874	ENSFALG00000007537	POP5	95	66.258	Ficedula_albicollis
MGP_CAROLIEiJ_G0027618	Pop5	96	87.654	ENSFDAG00000009972	POP5	96	87.654	Fukomys_damarensis
MGP_CAROLIEiJ_G0027618	Pop5	96	53.988	ENSFHEG00000022341	pop5	98	53.988	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027618	Pop5	76	55.814	ENSGMOG00000001073	pop5	98	55.814	Gadus_morhua
MGP_CAROLIEiJ_G0027618	Pop5	88	60.811	ENSGALG00000007124	POP5	56	58.282	Gallus_gallus
MGP_CAROLIEiJ_G0027618	Pop5	84	58.451	ENSGAFG00000005937	-	97	55.215	Gambusia_affinis
MGP_CAROLIEiJ_G0027618	Pop5	87	56.463	ENSGACG00000012710	-	90	56.463	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027618	Pop5	96	67.485	ENSGAGG00000016005	POP5	96	67.485	Gopherus_agassizii
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSGGOG00000013505	POP5	100	86.982	Gorilla_gorilla
MGP_CAROLIEiJ_G0027618	Pop5	84	54.930	ENSHBUG00000011718	-	99	52.976	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027618	Pop5	100	85.207	ENSHGLG00000011786	POP5	100	85.207	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027618	Pop5	100	85.207	ENSHGLG00100014284	POP5	100	85.207	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027618	Pop5	84	53.521	ENSHCOG00000011809	pop5	99	49.693	Hippocampus_comes
MGP_CAROLIEiJ_G0027618	Pop5	89	50.667	ENSIPUG00000003437	pop5	100	48.810	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027618	Pop5	100	89.349	ENSSTOG00000012577	POP5	100	89.349	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027618	Pop5	100	84.211	ENSJJAG00000001080	Pop5	100	86.550	Jaculus_jaculus
MGP_CAROLIEiJ_G0027618	Pop5	87	51.701	ENSKMAG00000011158	-	99	49.704	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027618	Pop5	91	51.299	ENSLBEG00000008652	pop5	91	49.701	Labrus_bergylta
MGP_CAROLIEiJ_G0027618	Pop5	84	64.085	ENSLACG00000018188	POP5	88	64.085	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027618	Pop5	84	54.225	ENSLOCG00000002924	pop5	98	50.909	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027618	Pop5	100	86.550	ENSLAFG00000014545	POP5	100	86.550	Loxodonta_africana
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSMFAG00000045933	POP5	100	89.172	Macaca_fascicularis
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSMMUG00000040120	POP5	100	86.982	Macaca_mulatta
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSMNEG00000041716	POP5	100	86.982	Macaca_nemestrina
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSMLEG00000029377	POP5	100	86.391	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027618	Pop5	89	54.667	ENSMAMG00000002108	pop5	99	51.205	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027618	Pop5	84	54.930	ENSMZEG00005000069	-	99	52.976	Maylandia_zebra
MGP_CAROLIEiJ_G0027618	Pop5	100	94.083	ENSMAUG00000019670	Pop5	100	94.083	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027618	Pop5	100	89.412	ENSMICG00000008692	POP5	100	91.176	Microcebus_murinus
MGP_CAROLIEiJ_G0027618	Pop5	100	85.207	ENSMOCG00000013322	Pop5	100	85.207	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027618	Pop5	80	55.556	ENSMMOG00000010471	pop5	82	55.556	Mola_mola
MGP_CAROLIEiJ_G0027618	Pop5	100	77.515	ENSMODG00000003066	POP5	68	77.515	Monodelphis_domestica
MGP_CAROLIEiJ_G0027618	Pop5	84	55.634	ENSMALG00000017797	-	99	51.205	Monopterus_albus
MGP_CAROLIEiJ_G0027618	Pop5	100	100.000	ENSMUSG00000060152	Pop5	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027618	Pop5	100	97.041	MGP_PahariEiJ_G0024198	Pop5	100	97.041	Mus_pahari
MGP_CAROLIEiJ_G0027618	Pop5	100	98.817	MGP_SPRETEiJ_G0028616	Pop5	100	98.817	Mus_spretus
MGP_CAROLIEiJ_G0027618	Pop5	88	88.591	ENSMPUG00000003221	POP5	100	84.024	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027618	Pop5	86	89.865	ENSMLUG00000014657	POP5	99	86.905	Myotis_lucifugus
MGP_CAROLIEiJ_G0027618	Pop5	100	90.000	ENSNGAG00000002594	Pop5	99	91.716	Nannospalax_galili
MGP_CAROLIEiJ_G0027618	Pop5	66	54.464	ENSNBRG00000001020	-	83	54.464	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSNLEG00000015839	POP5	100	86.982	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027618	Pop5	100	76.331	ENSMEUG00000015288	POP5	100	76.331	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027618	Pop5	86	91.781	ENSOPRG00000004327	POP5	99	87.059	Ochotona_princeps
MGP_CAROLIEiJ_G0027618	Pop5	99	75.000	ENSODEG00000010351	-	100	75.000	Octodon_degus
MGP_CAROLIEiJ_G0027618	Pop5	100	86.391	ENSODEG00000006549	-	100	86.391	Octodon_degus
MGP_CAROLIEiJ_G0027618	Pop5	84	54.930	ENSONIG00000011172	pop5	99	53.571	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027618	Pop5	68	70.435	ENSOANG00000001792	-	100	72.174	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027618	Pop5	99	85.799	ENSOCUG00000006537	POP5	99	85.799	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027618	Pop5	89	52.667	ENSORLG00000014745	pop5	90	52.667	Oryzias_latipes
MGP_CAROLIEiJ_G0027618	Pop5	84	53.521	ENSORLG00020001168	pop5	85	53.521	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027618	Pop5	80	55.882	ENSORLG00015013535	pop5	80	55.882	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027618	Pop5	96	50.602	ENSOMEG00000017643	pop5	99	50.602	Oryzias_melastigma
MGP_CAROLIEiJ_G0027618	Pop5	88	89.933	ENSOGAG00000008528	POP5	91	89.933	Otolemur_garnettii
MGP_CAROLIEiJ_G0027618	Pop5	100	85.465	ENSOARG00000012764	POP5	100	85.465	Ovis_aries
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSPPAG00000043719	POP5	100	86.982	Pan_paniscus
MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	ENSPPRG00000006474	POP5	100	85.294	Panthera_pardus
MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	ENSPTIG00000012194	POP5	100	85.294	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSPTRG00000005543	POP5	100	86.982	Pan_troglodytes
MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	ENSPANG00000014166	POP5	100	86.982	Papio_anubis
MGP_CAROLIEiJ_G0027618	Pop5	88	58.000	ENSPKIG00000025154	pop5	95	57.233	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027618	Pop5	65	70.909	ENSPSIG00000013154	POP5	86	70.909	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027618	Pop5	98	50.000	ENSPMGG00000000812	-	100	50.000	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027618	Pop5	100	94.083	ENSPEMG00000017493	Pop5	100	94.083	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027618	Pop5	88	55.405	ENSPFOG00000013000	pop5	94	57.426	Poecilia_formosa
MGP_CAROLIEiJ_G0027618	Pop5	84	55.634	ENSPLAG00000014070	pop5	85	55.634	Poecilia_latipinna
MGP_CAROLIEiJ_G0027618	Pop5	87	55.782	ENSPMEG00000024039	pop5	97	53.374	Poecilia_mexicana
MGP_CAROLIEiJ_G0027618	Pop5	87	55.782	ENSPMEG00000012863	POP5	97	53.374	Poecilia_mexicana
MGP_CAROLIEiJ_G0027618	Pop5	84	57.042	ENSPREG00000020151	pop5	85	57.042	Poecilia_reticulata
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSPPYG00000005036	POP5	84	86.391	Pongo_abelii
MGP_CAROLIEiJ_G0027618	Pop5	62	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
MGP_CAROLIEiJ_G0027618	Pop5	100	88.235	ENSPCOG00000017618	POP5	100	89.412	Propithecus_coquereli
MGP_CAROLIEiJ_G0027618	Pop5	100	87.059	ENSPVAG00000002233	POP5	100	88.235	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027618	Pop5	84	54.930	ENSPNYG00000002679	pop5	99	52.976	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027618	Pop5	84	51.049	ENSPNAG00000012662	pop5	97	46.243	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027618	Pop5	94	96.226	ENSRNOG00000001199	Pop5	100	95.858	Rattus_norvegicus
MGP_CAROLIEiJ_G0027618	Pop5	86	91.781	ENSRBIG00000043505	POP5	96	90.728	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027618	Pop5	88	91.892	ENSRROG00000045063	POP5	96	90.728	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027618	Pop5	88	92.568	ENSSBOG00000032691	POP5	100	91.176	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027618	Pop5	84	57.343	ENSSFOG00015005630	pop5	100	54.706	Scleropages_formosus
MGP_CAROLIEiJ_G0027618	Pop5	84	53.472	ENSSMAG00000018868	pop5	85	53.472	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027618	Pop5	99	52.695	ENSSDUG00000001282	-	99	52.695	Seriola_dumerili
MGP_CAROLIEiJ_G0027618	Pop5	99	52.096	ENSSLDG00000017031	pop5	99	52.096	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027618	Pop5	99	52.096	ENSSLDG00000003801	-	99	52.096	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027618	Pop5	62	90.385	ENSSARG00000005564	POP5	64	90.385	Sorex_araneus
MGP_CAROLIEiJ_G0027618	Pop5	84	73.239	ENSSPUG00000015531	POP5	98	66.463	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027618	Pop5	84	57.746	ENSSPAG00000015306	pop5	99	54.217	Stegastes_partitus
MGP_CAROLIEiJ_G0027618	Pop5	100	88.235	ENSSSCG00000009912	POP5	100	88.235	Sus_scrofa
MGP_CAROLIEiJ_G0027618	Pop5	100	65.089	ENSTGUG00000009602	POP5	100	65.089	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027618	Pop5	99	50.898	ENSTRUG00000016214	pop5	99	51.515	Takifugu_rubripes
MGP_CAROLIEiJ_G0027618	Pop5	99	54.167	ENSTNIG00000011465	pop5	96	56.173	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027618	Pop5	100	84.615	ENSTBEG00000010131	POP5	100	84.615	Tupaia_belangeri
MGP_CAROLIEiJ_G0027618	Pop5	100	87.647	ENSTTRG00000000153	POP5	100	87.647	Tursiops_truncatus
MGP_CAROLIEiJ_G0027618	Pop5	96	83.537	ENSUAMG00000015541	POP5	76	83.537	Ursus_americanus
MGP_CAROLIEiJ_G0027618	Pop5	100	84.118	ENSUMAG00000006137	POP5	100	84.118	Ursus_maritimus
MGP_CAROLIEiJ_G0027618	Pop5	100	86.471	ENSVPAG00000010365	POP5	100	86.471	Vicugna_pacos
MGP_CAROLIEiJ_G0027618	Pop5	100	85.882	ENSVVUG00000021154	POP5	100	85.882	Vulpes_vulpes
MGP_CAROLIEiJ_G0027618	Pop5	67	64.602	ENSXETG00000031793	POP5	98	64.602	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027618	Pop5	84	58.451	ENSXMAG00000003508	-	84	55.215	Xiphophorus_maculatus