EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027623 (Gene tree)
Gene ID: -
Gene Symbol: Gatc
Alias: 2010003O18Rik
Full Name: glutamyl-tRNA(Gln) amidotransferase%2C subunit C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 7927 bases
Position: chr5:108274085-108282011
Accession: 1923776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070139	Glu-tRNAGln	PF02686.15	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070139	-	1808	-	MGP_CAROLIEiJ_P0070139	155 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027623	Gatc	97	66.000	ENSG00000257218	GATC	100	87.234	Homo_sapiens
MGP_CAROLIEiJ_G0027623	Gatc	98	61.842	ENSAMEG00000013298	-	99	61.842	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027623	Gatc	55	69.767	ENSACIG00000016853	gatc	62	69.767	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027623	Gatc	58	67.778	ENSAOCG00000014641	gatc	72	67.778	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027623	Gatc	57	65.169	ENSATEG00000009237	gatc	74	65.169	Anabas_testudineus
MGP_CAROLIEiJ_G0027623	Gatc	68	63.810	ENSACAG00000002868	-	78	63.810	Anolis_carolinensis
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSANAG00000034389	-	97	64.667	Aotus_nancymaae
MGP_CAROLIEiJ_G0027623	Gatc	61	68.421	ENSAMXG00000004252	gatc	58	52.518	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027623	Gatc	98	62.500	ENSBTAG00000012791	GATC	99	62.500	Bos_taurus
MGP_CAROLIEiJ_G0027623	Gatc	74	36.522	WBGene00013433	Y66D12A.7	61	36.522	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0027623	Gatc	97	63.333	ENSCJAG00000001183	-	73	63.333	Callithrix_jacchus
MGP_CAROLIEiJ_G0027623	Gatc	98	64.474	ENSCAFG00000010311	-	99	64.474	Canis_familiaris
MGP_CAROLIEiJ_G0027623	Gatc	98	64.474	ENSCAFG00020020606	-	99	64.474	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027623	Gatc	98	61.842	ENSCHIG00000019423	-	99	61.842	Capra_hircus
MGP_CAROLIEiJ_G0027623	Gatc	97	65.333	ENSTSYG00000006845	-	97	65.333	Carlito_syrichta
MGP_CAROLIEiJ_G0027623	Gatc	100	65.806	ENSCPOG00000026436	-	100	65.806	Cavia_porcellus
MGP_CAROLIEiJ_G0027623	Gatc	97	63.333	ENSCCAG00000022235	-	97	63.333	Cebus_capucinus
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSCATG00000038807	GATC	97	64.667	Cercocebus_atys
MGP_CAROLIEiJ_G0027623	Gatc	100	67.089	ENSCLAG00000011015	-	99	67.089	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027623	Gatc	92	67.832	ENSCSAG00000002259	GATC	92	67.832	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027623	Gatc	97	64.901	ENSCHOG00000009235	-	98	64.901	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0027623	Gatc	63	68.041	ENSCPBG00000011342	-	52	68.041	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027623	Gatc	97	64.000	ENSCANG00000031071	GATC	97	64.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027623	Gatc	100	78.065	ENSCGRG00001005508	-	76	78.065	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027623	Gatc	100	81.935	ENSCGRG00001019220	-	100	81.935	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027623	Gatc	100	81.935	ENSCGRG00000004184	-	100	81.935	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027623	Gatc	100	78.710	ENSCGRG00000019471	GATC	76	78.710	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027623	Gatc	64	54.545	ENSCSEG00000016618	-	58	54.545	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027623	Gatc	92	54.225	ENSDARG00000056855	gatc	72	54.225	Danio_rerio
MGP_CAROLIEiJ_G0027623	Gatc	99	66.883	ENSDNOG00000012593	-	93	66.883	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027623	Gatc	61	44.681	FBgn0064115	GatC	64	44.681	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027623	Gatc	97	52.667	ENSETEG00000002604	-	97	52.667	Echinops_telfairi
MGP_CAROLIEiJ_G0027623	Gatc	60	52.688	ENSEBUG00000008772	gatc	60	49.038	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027623	Gatc	98	61.842	ENSECAG00000011118	-	99	61.842	Equus_caballus
MGP_CAROLIEiJ_G0027623	Gatc	94	61.379	ENSEEUG00000011638	-	93	61.379	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027623	Gatc	61	63.158	ENSELUG00000012608	gatc	69	63.158	Esox_lucius
MGP_CAROLIEiJ_G0027623	Gatc	98	61.842	ENSFCAG00000038718	-	99	61.842	Felis_catus
MGP_CAROLIEiJ_G0027623	Gatc	91	55.944	ENSFALG00000007564	-	86	55.944	Ficedula_albicollis
MGP_CAROLIEiJ_G0027623	Gatc	97	62.000	ENSFDAG00000018720	-	97	62.000	Fukomys_damarensis
MGP_CAROLIEiJ_G0027623	Gatc	68	55.455	ENSGMOG00000008742	gatc	68	55.455	Gadus_morhua
MGP_CAROLIEiJ_G0027623	Gatc	62	61.458	ENSGALG00000007195	-	84	55.085	Gallus_gallus
MGP_CAROLIEiJ_G0027623	Gatc	69	54.054	ENSGAFG00000012801	gatc	70	54.054	Gambusia_affinis
MGP_CAROLIEiJ_G0027623	Gatc	92	52.980	ENSGAGG00000016018	-	83	52.980	Gopherus_agassizii
MGP_CAROLIEiJ_G0027623	Gatc	95	63.514	ENSGGOG00000026821	GATC	100	63.514	Gorilla_gorilla
MGP_CAROLIEiJ_G0027623	Gatc	97	66.000	ENSHGLG00000011394	GATC	97	66.000	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027623	Gatc	97	64.000	ENSHGLG00100018850	-	97	64.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027623	Gatc	65	60.194	ENSHCOG00000009209	gatc	82	60.194	Hippocampus_comes
MGP_CAROLIEiJ_G0027623	Gatc	99	62.745	ENSSTOG00000025740	-	88	62.745	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027623	Gatc	100	68.987	ENSJJAG00000000369	Gatc	100	68.987	Jaculus_jaculus
MGP_CAROLIEiJ_G0027623	Gatc	58	62.222	ENSKMAG00000016476	gatc	76	59.406	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027623	Gatc	62	64.583	ENSLBEG00000007603	gatc	53	64.583	Labrus_bergylta
MGP_CAROLIEiJ_G0027623	Gatc	85	49.296	ENSLACG00000018239	-	69	49.296	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027623	Gatc	61	66.316	ENSLOCG00000004056	gatc	51	66.316	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027623	Gatc	96	65.101	ENSLAFG00000006384	-	96	65.101	Loxodonta_africana
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSMFAG00000034197	GATC	97	64.667	Macaca_fascicularis
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSMMUG00000046665	GATC	97	64.667	Macaca_mulatta
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSMNEG00000034653	GATC	97	64.667	Macaca_nemestrina
MGP_CAROLIEiJ_G0027623	Gatc	97	65.333	ENSMLEG00000039862	GATC	97	65.333	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027623	Gatc	61	65.263	ENSMAMG00000015851	gatc	52	65.263	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027623	Gatc	62	62.500	ENSMGAG00000008733	-	91	62.500	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027623	Gatc	100	82.581	ENSMAUG00000012756	Gatc	100	82.581	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027623	Gatc	97	67.333	ENSMICG00000008669	-	97	67.333	Microcebus_murinus
MGP_CAROLIEiJ_G0027623	Gatc	100	83.226	ENSMOCG00000005051	Gatc	100	83.226	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027623	Gatc	70	52.778	ENSMMOG00000017695	gatc	83	57.576	Mola_mola
MGP_CAROLIEiJ_G0027623	Gatc	70	68.182	ENSMODG00000003152	-	83	68.182	Monodelphis_domestica
MGP_CAROLIEiJ_G0027623	Gatc	100	98.065	ENSMUSG00000029536	Gatc	100	98.065	Mus_musculus
MGP_CAROLIEiJ_G0027623	Gatc	100	92.903	MGP_PahariEiJ_G0024203	Gatc	100	92.903	Mus_pahari
MGP_CAROLIEiJ_G0027623	Gatc	100	96.774	MGP_SPRETEiJ_G0028621	Gatc	100	96.774	Mus_spretus
MGP_CAROLIEiJ_G0027623	Gatc	98	63.158	ENSMPUG00000003183	-	99	63.158	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027623	Gatc	64	76.768	ENSMLUG00000010341	-	98	76.768	Myotis_lucifugus
MGP_CAROLIEiJ_G0027623	Gatc	99	69.872	ENSNGAG00000004734	Gatc	100	69.872	Nannospalax_galili
MGP_CAROLIEiJ_G0027623	Gatc	97	62.667	ENSNLEG00000015651	GATC	97	62.667	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027623	Gatc	71	66.364	ENSMEUG00000004064	-	88	66.364	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027623	Gatc	97	62.914	ENSOPRG00000004226	-	98	62.914	Ochotona_princeps
MGP_CAROLIEiJ_G0027623	Gatc	100	62.581	ENSODEG00000005919	-	100	62.581	Octodon_degus
MGP_CAROLIEiJ_G0027623	Gatc	58	65.217	ENSONIG00000013444	gatc	63	65.217	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027623	Gatc	90	69.784	ENSOCUG00000009867	-	90	69.784	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027623	Gatc	62	60.417	ENSORLG00000007156	gatc	78	66.279	Oryzias_latipes
MGP_CAROLIEiJ_G0027623	Gatc	62	60.417	ENSORLG00020014991	gatc	51	60.417	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027623	Gatc	62	61.458	ENSORLG00015003450	gatc	51	61.458	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027623	Gatc	61	62.105	ENSOMEG00000002280	gatc	51	62.105	Oryzias_melastigma
MGP_CAROLIEiJ_G0027623	Gatc	68	75.238	ENSOGAG00000003850	-	96	75.238	Otolemur_garnettii
MGP_CAROLIEiJ_G0027623	Gatc	72	75.000	ENSOARG00000012338	-	87	75.000	Ovis_aries
MGP_CAROLIEiJ_G0027623	Gatc	97	66.000	ENSPPAG00000029164	GATC	97	66.000	Pan_paniscus
MGP_CAROLIEiJ_G0027623	Gatc	98	62.500	ENSPPRG00000000929	-	99	62.500	Panthera_pardus
MGP_CAROLIEiJ_G0027623	Gatc	98	62.500	ENSPTIG00000009889	-	99	62.500	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027623	Gatc	97	66.667	ENSPTRG00000049887	GATC	97	66.667	Pan_troglodytes
MGP_CAROLIEiJ_G0027623	Gatc	97	64.000	ENSPANG00000033975	GATC	97	64.000	Papio_anubis
MGP_CAROLIEiJ_G0027623	Gatc	66	63.725	ENSPSIG00000011112	-	87	63.725	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027623	Gatc	81	51.515	ENSPMGG00000018829	gatc	83	51.515	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027623	Gatc	100	82.581	ENSPEMG00000000665	Gatc	100	82.581	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027623	Gatc	90	56.338	ENSPCIG00000025999	-	92	56.338	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027623	Gatc	65	61.386	ENSPFOG00000011603	gatc	54	61.386	Poecilia_formosa
MGP_CAROLIEiJ_G0027623	Gatc	65	60.396	ENSPLAG00000002471	gatc	54	60.396	Poecilia_latipinna
MGP_CAROLIEiJ_G0027623	Gatc	65	60.396	ENSPMEG00000020958	gatc	54	60.396	Poecilia_mexicana
MGP_CAROLIEiJ_G0027623	Gatc	65	62.000	ENSPREG00000022256	gatc	68	62.000	Poecilia_reticulata
MGP_CAROLIEiJ_G0027623	Gatc	97	65.333	ENSPPYG00000005030	GATC	97	65.333	Pongo_abelii
MGP_CAROLIEiJ_G0027623	Gatc	91	63.830	ENSPCAG00000013864	-	90	63.830	Procavia_capensis
MGP_CAROLIEiJ_G0027623	Gatc	69	71.552	ENSPCOG00000015558	-	90	71.552	Propithecus_coquereli
MGP_CAROLIEiJ_G0027623	Gatc	95	65.541	ENSPCOG00000009493	-	100	65.541	Propithecus_coquereli
MGP_CAROLIEiJ_G0027623	Gatc	98	63.816	ENSPVAG00000002228	-	99	63.816	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027623	Gatc	90	84.286	ENSRNOG00000045621	Gatc	92	84.286	Rattus_norvegicus
MGP_CAROLIEiJ_G0027623	Gatc	100	85.161	ENSRNOG00000001161	Gatc	100	85.161	Rattus_norvegicus
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSRBIG00000033363	GATC	97	64.667	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027623	Gatc	97	64.667	ENSRROG00000042802	GATC	97	64.667	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027623	Gatc	97	62.667	ENSSBOG00000033750	-	97	62.667	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027623	Gatc	67	67.308	ENSSHAG00000005745	-	98	67.308	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027623	Gatc	64	60.606	ENSSFOG00015002508	gatc	59	59.574	Scleropages_formosus
MGP_CAROLIEiJ_G0027623	Gatc	58	68.889	ENSSMAG00000014280	gatc	50	68.889	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027623	Gatc	92	50.340	ENSSPUG00000015693	-	90	55.385	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027623	Gatc	98	57.895	ENSSSCG00000032747	-	97	57.895	Sus_scrofa
MGP_CAROLIEiJ_G0027623	Gatc	63	67.010	ENSTGUG00000009561	-	90	67.010	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027623	Gatc	68	57.143	ENSTRUG00000021596	gatc	57	57.143	Takifugu_rubripes
MGP_CAROLIEiJ_G0027623	Gatc	98	63.816	ENSTTRG00000000144	GATC	99	63.816	Tursiops_truncatus
MGP_CAROLIEiJ_G0027623	Gatc	98	62.500	ENSUAMG00000015523	-	99	62.500	Ursus_americanus
MGP_CAROLIEiJ_G0027623	Gatc	98	64.474	ENSVVUG00000021055	-	99	64.474	Vulpes_vulpes
MGP_CAROLIEiJ_G0027623	Gatc	61	63.158	ENSXCOG00000017087	gatc	69	63.158	Xiphophorus_couchianus