EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027656 (Gene tree)
Gene ID: 110294454
Gene Symbol: Rbm19
Alias: 1200009A02Rik
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 83076 bases
Position: chr5:113069089-113152164
Accession: 110294454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070322	RRM_1	PF00076.22	2.9e-87	1	5
MGP_CAROLIEiJ_P0070322	RRM_1	PF00076.22	2.9e-87	2	5
MGP_CAROLIEiJ_P0070322	RRM_1	PF00076.22	2.9e-87	3	5
MGP_CAROLIEiJ_P0070322	RRM_1	PF00076.22	2.9e-87	4	5
MGP_CAROLIEiJ_P0070322	RRM_1	PF00076.22	2.9e-87	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070328	-	391	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070329	-	360	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070322	-	3500	XM_021162701	MGP_CAROLIEiJ_P0070322	952 (aa)	XP_021018360	UPI000A31B30A
MGP_CAROLIEiJ_T0070323	-	455	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070324	-	3392	-	MGP_CAROLIEiJ_P0070324	870 (aa)	-	-
MGP_CAROLIEiJ_T0070325	-	598	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070326	-	635	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070327	-	484	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0027656	Rbm19	72	36.066	MGP_CAROLIEiJ_G0024627	Pabpc1l	65	35.484
MGP_CAROLIEiJ_G0027656	Rbm19	70	34.667	MGP_CAROLIEiJ_G0021058	Pabpc6	58	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.405	ENSG00000122965	RBM19	98	85.185	Homo_sapiens
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.834	ENSAPOG00000010507	rbm19	99	58.811	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027656	Rbm19	100	77.423	ENSAMEG00000008544	RBM19	100	77.559	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.889	ENSACIG00000017780	rbm19	99	59.531	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027656	Rbm19	99	60.436	ENSAOCG00000008554	rbm19	99	59.667	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.305	ENSAPEG00000022381	rbm19	96	58.466	Amphiprion_percula
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.497	ENSATEG00000007000	rbm19	99	58.817	Anabas_testudineus
MGP_CAROLIEiJ_G0027656	Rbm19	98	61.573	ENSAPLG00000015319	RBM19	99	63.094	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027656	Rbm19	99	65.711	ENSACAG00000005065	RBM19	99	64.783	Anolis_carolinensis
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.394	ENSANAG00000024136	RBM19	100	80.602	Aotus_nancymaae
MGP_CAROLIEiJ_G0027656	Rbm19	99	55.533	ENSACLG00000001399	rbm19	99	56.354	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027656	Rbm19	87	61.264	ENSAMXG00000017073	rbm19	97	61.588	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.991	ENSBTAG00000031824	RBM19	100	79.938	Bos_taurus
MGP_CAROLIEiJ_G0027656	Rbm19	83	42.963	WBGene00004315	rbd-1	99	44.330	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.896	ENSCJAG00000009798	RBM19	100	80.104	Callithrix_jacchus
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.969	ENSCAFG00000009146	RBM19	99	79.094	Canis_familiaris
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.072	ENSCAFG00020017862	RBM19	99	79.197	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.115	ENSCHIG00000014917	RBM19	100	80.248	Capra_hircus
MGP_CAROLIEiJ_G0027656	Rbm19	99	78.369	ENSTSYG00000007207	RBM19	98	78.256	Carlito_syrichta
MGP_CAROLIEiJ_G0027656	Rbm19	99	79.474	ENSCAPG00000006869	RBM19	99	79.895	Cavia_aperea
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.271	ENSCPOG00000026629	RBM19	100	80.515	Cavia_porcellus
MGP_CAROLIEiJ_G0027656	Rbm19	92	72.270	ENSCCAG00000026637	-	99	72.270	Cebus_capucinus
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.415	ENSCCAG00000021665	-	100	80.622	Cebus_capucinus
MGP_CAROLIEiJ_G0027656	Rbm19	99	80.797	ENSCATG00000035841	RBM19	100	81.007	Cercocebus_atys
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.639	ENSCLAG00000009965	RBM19	100	81.153	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027656	Rbm19	100	76.389	ENSCSAG00000002352	RBM19	96	77.679	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027656	Rbm19	99	66.599	ENSCPBG00000011990	RBM19	99	67.351	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027656	Rbm19	80	50.549	ENSCING00000023076	-	96	49.311	Ciona_intestinalis
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.785	ENSCANG00000035927	RBM19	100	80.829	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027656	Rbm19	100	90.302	ENSCGRG00001000323	Rbm19	100	90.407	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027656	Rbm19	100	90.302	ENSCGRG00000010371	Rbm19	100	90.407	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.514	ENSCSEG00000017436	rbm19	94	63.650	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.840	ENSCVAG00000000300	rbm19	100	58.247	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.959	ENSDARG00000042590	rbm19	100	58.094	Danio_rerio
MGP_CAROLIEiJ_G0027656	Rbm19	99	77.987	ENSDNOG00000024534	RBM19	96	78.848	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027656	Rbm19	99	76.923	ENSDORG00000008549	Rbm19	100	77.180	Dipodomys_ordii
MGP_CAROLIEiJ_G0027656	Rbm19	66	42.923	FBgn0036018	CG3335	71	41.481	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027656	Rbm19	64	94.203	ENSETEG00000016887	-	59	94.203	Echinops_telfairi
MGP_CAROLIEiJ_G0027656	Rbm19	94	46.200	ENSEBUG00000008521	-	99	45.606	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.011	ENSEASG00005009452	RBM19	100	81.470	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.256	ENSECAG00000023716	RBM19	100	81.715	Equus_caballus
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.041	ENSELUG00000012561	rbm19	99	58.436	Esox_lucius
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.712	ENSFCAG00000002962	RBM19	99	79.067	Felis_catus
MGP_CAROLIEiJ_G0027656	Rbm19	98	64.234	ENSFALG00000007768	RBM19	99	64.682	Ficedula_albicollis
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.461	ENSFDAG00000004629	RBM19	100	79.876	Fukomys_damarensis
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.917	ENSFHEG00000012578	rbm19	99	57.187	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027656	Rbm19	99	56.428	ENSGMOG00000013120	rbm19	100	57.771	Gadus_morhua
MGP_CAROLIEiJ_G0027656	Rbm19	99	63.626	ENSGALG00000008289	RBM19	99	65.235	Gallus_gallus
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.639	ENSGAFG00000012337	rbm19	99	58.054	Gambusia_affinis
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.596	ENSGACG00000009462	rbm19	100	59.149	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027656	Rbm19	62	73.737	ENSGAGG00000019457	RBM19	100	74.242	Gopherus_agassizii
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.244	ENSGGOG00000007371	RBM19	100	81.451	Gorilla_gorilla
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.172	ENSHBUG00000009047	rbm19	99	58.038	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.063	ENSHGLG00000010899	RBM19	100	80.167	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.855	ENSHGLG00100017936	RBM19	100	79.958	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027656	Rbm19	99	60.312	ENSHCOG00000016446	rbm19	99	58.977	Hippocampus_comes
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.498	ENSIPUG00000023849	rbm19	99	57.769	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.504	ENSKMAG00000014807	rbm19	95	63.952	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.696	ENSLBEG00000012897	rbm19	99	56.042	Labrus_bergylta
MGP_CAROLIEiJ_G0027656	Rbm19	74	60.030	ENSLACG00000012030	RBM19	93	60.968	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027656	Rbm19	99	62.591	ENSLOCG00000008341	rbm19	100	62.668	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027656	Rbm19	97	78.731	ENSLAFG00000004187	RBM19	100	79.553	Loxodonta_africana
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.140	ENSMFAG00000046091	RBM19	100	77.927	Macaca_fascicularis
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.244	ENSMMUG00000010496	RBM19	100	81.451	Macaca_mulatta
MGP_CAROLIEiJ_G0027656	Rbm19	96	80.237	ENSMNEG00000028452	RBM19	99	80.473	Macaca_nemestrina
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.682	ENSMLEG00000034550	RBM19	100	78.888	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027656	Rbm19	99	60.375	ENSMAMG00000014397	rbm19	99	60.271	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.301	ENSMZEG00005016607	rbm19	99	59.875	Maylandia_zebra
MGP_CAROLIEiJ_G0027656	Rbm19	98	54.787	ENSMGAG00000010087	RBM19	99	56.751	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027656	Rbm19	100	91.004	ENSMAUG00000019290	Rbm19	100	91.527	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.931	ENSMICG00000014423	RBM19	100	82.573	Microcebus_murinus
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.531	ENSMMOG00000017839	rbm19	99	57.322	Mola_mola
MGP_CAROLIEiJ_G0027656	Rbm19	99	72.545	ENSMODG00000003597	RBM19	99	73.424	Monodelphis_domestica
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.333	ENSMALG00000012647	rbm19	99	58.585	Monopterus_albus
MGP_CAROLIEiJ_G0027656	Rbm19	100	98.428	ENSMUSG00000029594	Rbm19	100	98.428	Mus_musculus
MGP_CAROLIEiJ_G0027656	Rbm19	100	96.331	MGP_PahariEiJ_G0024238	Rbm19	100	96.331	Mus_pahari
MGP_CAROLIEiJ_G0027656	Rbm19	100	98.010	MGP_SPRETEiJ_G0028656	Rbm19	100	98.010	Mus_spretus
MGP_CAROLIEiJ_G0027656	Rbm19	100	77.538	ENSMPUG00000002694	RBM19	99	79.197	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.714	ENSMLUG00000015075	RBM19	100	80.816	Myotis_lucifugus
MGP_CAROLIEiJ_G0027656	Rbm19	99	85.952	ENSNGAG00000009076	Rbm19	99	86.576	Nannospalax_galili
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.325	ENSNBRG00000005913	rbm19	99	58.996	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.508	ENSNLEG00000000190	RBM19	100	81.451	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027656	Rbm19	92	68.936	ENSMEUG00000004045	RBM19	92	68.936	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.926	ENSOPRG00000012064	RBM19	100	79.132	Ochotona_princeps
MGP_CAROLIEiJ_G0027656	Rbm19	100	77.453	ENSODEG00000012977	RBM19	100	78.288	Octodon_degus
MGP_CAROLIEiJ_G0027656	Rbm19	100	59.045	ENSONIG00000013576	rbm19	100	59.286	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027656	Rbm19	100	76.955	ENSOCUG00000009398	RBM19	99	77.583	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.316	ENSORLG00000008077	rbm19	99	58.661	Oryzias_latipes
MGP_CAROLIEiJ_G0027656	Rbm19	99	56.982	ENSORLG00020013187	rbm19	99	57.822	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.988	ENSORLG00015001774	rbm19	99	58.446	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.768	ENSOMEG00000003334	rbm19	99	58.394	Oryzias_melastigma
MGP_CAROLIEiJ_G0027656	Rbm19	97	81.607	ENSOGAG00000000602	RBM19	100	81.141	Otolemur_garnettii
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.898	ENSOARG00000006827	RBM19	100	80.331	Ovis_aries
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.527	ENSPPAG00000043712	RBM19	100	81.470	Pan_paniscus
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.505	ENSPPRG00000023027	RBM19	99	79.024	Panthera_pardus
MGP_CAROLIEiJ_G0027656	Rbm19	100	71.992	ENSPTIG00000011096	RBM19	100	71.634	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.424	ENSPTRG00000005494	RBM19	100	81.366	Pan_troglodytes
MGP_CAROLIEiJ_G0027656	Rbm19	100	81.451	ENSPANG00000004795	RBM19	99	78.564	Papio_anubis
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.212	ENSPKIG00000017095	rbm19	99	57.025	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027656	Rbm19	93	64.405	ENSPSIG00000008191	RBM19	99	64.646	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027656	Rbm19	84	62.500	ENSPMGG00000019087	rbm19	100	60.836	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027656	Rbm19	100	90.272	ENSPEMG00000018058	Rbm19	100	90.795	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027656	Rbm19	99	74.247	ENSPCIG00000028861	RBM19	100	73.859	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.785	ENSPFOG00000015300	rbm19	99	58.603	Poecilia_formosa
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.351	ENSPLAG00000000059	rbm19	99	58.603	Poecilia_latipinna
MGP_CAROLIEiJ_G0027656	Rbm19	99	57.367	ENSPMEG00000018585	rbm19	97	63.537	Poecilia_mexicana
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.081	ENSPREG00000000978	rbm19	99	59.333	Poecilia_reticulata
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.512	ENSPPYG00000004993	RBM19	100	78.616	Pongo_abelii
MGP_CAROLIEiJ_G0027656	Rbm19	74	75.000	ENSPCAG00000005063	-	62	75.000	Procavia_capensis
MGP_CAROLIEiJ_G0027656	Rbm19	100	82.139	ENSPCOG00000016190	RBM19	100	82.139	Propithecus_coquereli
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.041	ENSPVAG00000011618	RBM19	99	78.866	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.137	ENSPNYG00000017434	rbm19	99	58.359	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.351	ENSPNAG00000012069	rbm19	99	59.459	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027656	Rbm19	100	93.835	ENSRNOG00000001397	Rbm19	100	93.730	Rattus_norvegicus
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.475	ENSRBIG00000041419	RBM19	100	79.378	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.062	ENSRROG00000031938	RBM19	100	80.725	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027656	Rbm19	72	38.478	YPR112C	-	77	37.977	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0027656	Rbm19	100	78.135	ENSSBOG00000021434	-	100	78.238	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027656	Rbm19	96	71.158	ENSSBOG00000022679	-	99	70.081	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027656	Rbm19	99	72.919	ENSSHAG00000012256	RBM19	100	73.250	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027656	Rbm19	99	56.748	ENSSFOG00015005124	rbm19	99	57.803	Scleropages_formosus
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.750	ENSSMAG00000011828	rbm19	99	59.333	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.275	ENSSDUG00000013544	rbm19	99	59.378	Seriola_dumerili
MGP_CAROLIEiJ_G0027656	Rbm19	87	63.814	ENSSLDG00000025413	rbm19	96	63.238	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027656	Rbm19	61	71.698	ENSSPUG00000011064	RBM19	98	72.213	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027656	Rbm19	99	55.822	ENSSPAG00000018685	rbm19	98	57.614	Stegastes_partitus
MGP_CAROLIEiJ_G0027656	Rbm19	100	80.290	ENSSSCG00000009868	RBM19	100	81.224	Sus_scrofa
MGP_CAROLIEiJ_G0027656	Rbm19	99	65.866	ENSTGUG00000009017	RBM19	100	65.735	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.105	ENSTRUG00000016032	rbm19	99	59.148	Takifugu_rubripes
MGP_CAROLIEiJ_G0027656	Rbm19	77	87.582	ENSTBEG00000000703	RBM19	73	93.443	Tupaia_belangeri
MGP_CAROLIEiJ_G0027656	Rbm19	84	76.849	ENSTTRG00000003987	RBM19	85	77.170	Tursiops_truncatus
MGP_CAROLIEiJ_G0027656	Rbm19	99	78.542	ENSUAMG00000002076	RBM19	99	79.271	Ursus_americanus
MGP_CAROLIEiJ_G0027656	Rbm19	99	78.920	ENSUMAG00000010816	RBM19	100	79.647	Ursus_maritimus
MGP_CAROLIEiJ_G0027656	Rbm19	100	79.072	ENSVVUG00000007886	RBM19	99	79.171	Vulpes_vulpes
MGP_CAROLIEiJ_G0027656	Rbm19	99	61.123	ENSXETG00000017668	rbm19	94	58.101	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027656	Rbm19	99	58.316	ENSXCOG00000016995	rbm19	69	63.636	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0027656	Rbm19	99	59.020	ENSXMAG00000007641	rbm19	99	58.412	Xiphophorus_maculatus