EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027720 (Gene tree)
Gene ID: 110295015
Gene Symbol: Setd1b
Alias: KMT2G
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 24101 bases
Position: chr5:116158949-116183049
Accession: 110295015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070672	RRM_1	PF00076.22	2.8e-10	1	1
MGP_CAROLIEiJ_P0070673	RRM_1	PF00076.22	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070672	-	7289	-	MGP_CAROLIEiJ_P0070672	1943 (aa)	-	-
MGP_CAROLIEiJ_T0070673	-	7171	XM_021163458	MGP_CAROLIEiJ_P0070673	1984 (aa)	XP_021019117	UPI000A3161C1
MGP_CAROLIEiJ_T0070671	-	3415	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027720	Setd1b	52	81.571	ENSAMEG00000014455	SETD1B	61	79.804	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027720	Setd1b	67	63.702	ENSAPLG00000005217	SETD1B	55	74.074	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027720	Setd1b	62	90.193	ENSCAFG00020016619	SETD1B	63	90.675	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027720	Setd1b	71	84.579	ENSCHIG00000013406	SETD1B	55	95.760	Capra_hircus
MGP_CAROLIEiJ_G0027720	Setd1b	77	94.444	ENSTSYG00000033777	SETD1B	89	94.346	Carlito_syrichta
MGP_CAROLIEiJ_G0027720	Setd1b	95	90.729	ENSCATG00000035803	SETD1B	97	91.185	Cercocebus_atys
MGP_CAROLIEiJ_G0027720	Setd1b	90	90.606	ENSCLAG00000013200	SETD1B	91	96.443	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027720	Setd1b	88	80.091	ENSCSAG00000002187	SETD1B	97	80.816	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027720	Setd1b	66	61.331	ENSCPBG00000026067	SETD1B	53	72.767	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027720	Setd1b	87	88.306	ENSCANG00000023445	SETD1B	97	88.485	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027720	Setd1b	57	98.045	ENSCGRG00000018075	Setd1b	95	98.045	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027720	Setd1b	96	91.003	ENSEASG00005012369	SETD1B	94	97.112	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027720	Setd1b	54	97.183	ENSECAG00000006549	SETD1B	52	97.173	Equus_caballus
MGP_CAROLIEiJ_G0027720	Setd1b	52	89.530	ENSFCAG00000013185	SETD1B	53	90.705	Felis_catus
MGP_CAROLIEiJ_G0027720	Setd1b	60	90.285	ENSFDAG00000015120	SETD1B	62	90.143	Fukomys_damarensis
MGP_CAROLIEiJ_G0027720	Setd1b	52	94.667	ENSGGOG00000006715	SETD1B	55	95.913	Gorilla_gorilla
MGP_CAROLIEiJ_G0027720	Setd1b	64	78.605	ENSMFAG00000030930	SETD1B	99	81.052	Macaca_fascicularis
MGP_CAROLIEiJ_G0027720	Setd1b	99	81.263	ENSMNEG00000014228	SETD1B	99	81.410	Macaca_nemestrina
MGP_CAROLIEiJ_G0027720	Setd1b	94	90.506	ENSMLEG00000039573	SETD1B	96	90.981	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027720	Setd1b	100	98.693	ENSMUSG00000038384	Setd1b	100	98.693	Mus_musculus
MGP_CAROLIEiJ_G0027720	Setd1b	100	97.642	MGP_PahariEiJ_G0024300	Setd1b	100	97.642	Mus_pahari
MGP_CAROLIEiJ_G0027720	Setd1b	69	96.196	ENSNLEG00000001254	SETD1B	89	96.196	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027720	Setd1b	73	91.793	ENSODEG00000010155	SETD1B	73	91.692	Octodon_degus
MGP_CAROLIEiJ_G0027720	Setd1b	96	77.871	ENSOCUG00000017708	SETD1B	98	91.624	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027720	Setd1b	99	85.816	ENSOGAG00000034809	SETD1B	99	86.327	Otolemur_garnettii
MGP_CAROLIEiJ_G0027720	Setd1b	66	97.544	ENSPPRG00000021041	SETD1B	97	93.151	Panthera_pardus
MGP_CAROLIEiJ_G0027720	Setd1b	74	75.738	ENSPCIG00000028605	SETD1B	85	77.532	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027720	Setd1b	63	91.727	ENSRNOG00000001337	Setd1b	62	90.924	Rattus_norvegicus
MGP_CAROLIEiJ_G0027720	Setd1b	62	80.180	ENSRBIG00000034516	SETD1B	62	80.410	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027720	Setd1b	62	80.312	ENSRROG00000011844	SETD1B	62	80.230	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027720	Setd1b	71	89.539	ENSSBOG00000033322	SETD1B	76	89.362	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027720	Setd1b	69	62.802	ENSSFOG00015004814	SETD1B	61	86.622	Scleropages_formosus
MGP_CAROLIEiJ_G0027720	Setd1b	73	88.226	ENSSSCG00000009806	SETD1B	68	88.720	Sus_scrofa
MGP_CAROLIEiJ_G0027720	Setd1b	94	56.116	ENSXETG00000003760	setd1b	55	71.868	Xenopus_tropicalis