EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027732 (Gene tree)
Gene ID: 110295215
Gene Symbol: Zcchc8
Alias: 5730565F05Rik
Full Name: zinc finger%2C CCHC domain containing 8
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 24670 bases
Position: chr5:116701458-116726127
Accession: 1917900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070746	zf-CCHC	PF00098.23	1.9e-05	1	1
MGP_CAROLIEiJ_P0070741	zf-CCHC	PF00098.23	0.00021	1	1
MGP_CAROLIEiJ_P0070742	zf-CCHC	PF00098.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070746	-	532	-	MGP_CAROLIEiJ_P0070746	102 (aa)	-	-
MGP_CAROLIEiJ_T0070747	-	647	-	MGP_CAROLIEiJ_P0070747	157 (aa)	-	-
MGP_CAROLIEiJ_T0070744	-	727	-	MGP_CAROLIEiJ_P0070744	96 (aa)	-	-
MGP_CAROLIEiJ_T0070745	-	742	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070742	-	4457	-	MGP_CAROLIEiJ_P0070742	708 (aa)	-	-
MGP_CAROLIEiJ_T0070743	-	1881	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0070741	-	4521	-	MGP_CAROLIEiJ_P0070741	708 (aa)	-	-
MGP_CAROLIEiJ_T0070748	-	463	-	MGP_CAROLIEiJ_P0070748	46 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.388	ENSG00000033030	ZCCHC8	100	89.474	Homo_sapiens
MGP_CAROLIEiJ_G0027732	Zcchc8	100	75.978	ENSAMEG00000014731	ZCCHC8	100	75.838	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027732	Zcchc8	78	67.500	ENSACIG00000002185	zcchc8	76	55.000	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	87.805	ENSAPLG00000007582	ZCCHC8	90	62.519	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027732	Zcchc8	100	78.652	ENSANAG00000035627	ZCCHC8	100	78.511	Aotus_nancymaae
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.412	ENSBTAG00000006114	ZCCHC8	100	79.272	Bos_taurus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.050	ENSCJAG00000020409	ZCCHC8	100	76.611	Callithrix_jacchus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.552	ENSCAFG00000007859	ZCCHC8	100	79.412	Canis_familiaris
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.028	ENSCAFG00020016406	ZCCHC8	99	81.457	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.420	ENSCHIG00000000649	ZCCHC8	100	80.280	Capra_hircus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.107	ENSTSYG00000011362	ZCCHC8	100	77.107	Carlito_syrichta
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSCAPG00000017455	ZCCHC8	98	78.357	Cavia_aperea
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSCPOG00000014385	ZCCHC8	99	76.944	Cavia_porcellus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.247	ENSCCAG00000028625	ZCCHC8	100	77.247	Cebus_capucinus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.826	ENSCATG00000041134	ZCCHC8	100	76.826	Cercocebus_atys
MGP_CAROLIEiJ_G0027732	Zcchc8	100	72.168	ENSCSAG00000002121	ZCCHC8	100	72.168	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	90.123	ENSCPBG00000002676	ZCCHC8	100	60.729	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027732	Zcchc8	100	88.169	ENSCGRG00001023706	Zcchc8	100	88.028	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027732	Zcchc8	100	88.169	ENSCGRG00000015199	Zcchc8	100	88.028	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027732	Zcchc8	80	93.902	ENSDNOG00000046140	-	100	82.266	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	78.541	ENSDORG00000008756	Zcchc8	100	78.121	Dipodomys_ordii
MGP_CAROLIEiJ_G0027732	Zcchc8	80	92.683	ENSETEG00000004735	ZCCHC8	89	71.220	Echinops_telfairi
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSEASG00005012441	ZCCHC8	98	80.315	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	78.652	ENSECAG00000006984	ZCCHC8	100	78.371	Equus_caballus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.365	ENSFCAG00000027671	ZCCHC8	100	80.224	Felis_catus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	87.654	ENSFALG00000009102	ZCCHC8	99	60.254	Ficedula_albicollis
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSFDAG00000010964	ZCCHC8	100	85.903	Fukomys_damarensis
MGP_CAROLIEiJ_G0027732	Zcchc8	79	86.420	ENSGALG00000004486	ZCCHC8	99	57.775	Gallus_gallus
MGP_CAROLIEiJ_G0027732	Zcchc8	78	61.250	ENSGACG00000008163	zcchc8	99	40.518	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	91.358	ENSGAGG00000007842	ZCCHC8	100	60.324	Gopherus_agassizii
MGP_CAROLIEiJ_G0027732	Zcchc8	100	81.180	ENSSTOG00000001683	ZCCHC8	100	81.039	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSJJAG00000011650	Zcchc8	100	78.808	Jaculus_jaculus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	75.035	ENSLAFG00000016477	ZCCHC8	100	74.756	Loxodonta_africana
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.826	ENSMFAG00000045203	ZCCHC8	100	76.826	Macaca_fascicularis
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.966	ENSMMUG00000013643	ZCCHC8	100	76.966	Macaca_mulatta
MGP_CAROLIEiJ_G0027732	Zcchc8	100	74.157	ENSMLEG00000031615	ZCCHC8	100	74.157	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	85.366	ENSMGAG00000004799	ZCCHC8	98	60.150	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027732	Zcchc8	100	87.887	ENSMAUG00000018909	Zcchc8	100	87.887	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.224	ENSMICG00000013486	ZCCHC8	100	80.084	Microcebus_murinus
MGP_CAROLIEiJ_G0027732	Zcchc8	75	64.474	ENSMMOG00000017082	zcchc8	91	44.390	Mola_mola
MGP_CAROLIEiJ_G0027732	Zcchc8	79	92.593	ENSMODG00000012264	ZCCHC8	100	68.700	Monodelphis_domestica
MGP_CAROLIEiJ_G0027732	Zcchc8	100	97.059	ENSMUSG00000029427	Zcchc8	99	97.059	Mus_musculus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	93.829	MGP_PahariEiJ_G0024312	Zcchc8	100	93.829	Mus_pahari
MGP_CAROLIEiJ_G0027732	Zcchc8	100	98.039	MGP_SPRETEiJ_G0028730	Zcchc8	100	98.039	Mus_spretus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.056	ENSMPUG00000001986	ZCCHC8	100	79.916	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027732	Zcchc8	100	75.833	ENSMLUG00000005334	ZCCHC8	100	74.722	Myotis_lucifugus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.805	ENSNGAG00000015385	Zcchc8	100	79.416	Nannospalax_galili
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.247	ENSNLEG00000001723	ZCCHC8	100	77.247	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027732	Zcchc8	83	89.412	ENSMEUG00000003497	ZCCHC8	98	70.728	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027732	Zcchc8	100	69.916	ENSOPRG00000013758	ZCCHC8	100	69.874	Ochotona_princeps
MGP_CAROLIEiJ_G0027732	Zcchc8	84	85.057	ENSOANG00000006199	ZCCHC8	100	64.753	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	78.852	ENSOCUG00000013759	ZCCHC8	100	78.711	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSOGAG00000015900	ZCCHC8	100	80.265	Otolemur_garnettii
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.833	ENSOARG00000010728	ZCCHC8	100	78.164	Ovis_aries
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.247	ENSPPAG00000044102	ZCCHC8	100	77.247	Pan_paniscus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.804	ENSPPRG00000023848	ZCCHC8	100	79.663	Panthera_pardus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.224	ENSPTIG00000017015	ZCCHC8	100	80.084	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.247	ENSPTRG00000005579	ZCCHC8	100	77.247	Pan_troglodytes
MGP_CAROLIEiJ_G0027732	Zcchc8	79	88.889	ENSPSIG00000011004	ZCCHC8	94	59.932	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027732	Zcchc8	77	53.165	ENSPMGG00000000988	zcchc8	82	38.772	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	87.658	ENSPEMG00000007962	Zcchc8	100	87.658	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027732	Zcchc8	79	93.827	ENSPCIG00000028643	ZCCHC8	99	66.168	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	74.438	ENSPPYG00000005068	ZCCHC8	100	74.377	Pongo_abelii
MGP_CAROLIEiJ_G0027732	Zcchc8	80	92.683	ENSPCAG00000016551	ZCCHC8	100	71.248	Procavia_capensis
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.718	ENSPCOG00000014512	ZCCHC8	100	75.596	Propithecus_coquereli
MGP_CAROLIEiJ_G0027732	Zcchc8	100	78.652	ENSPVAG00000001276	ZCCHC8	100	78.371	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	90.395	ENSRNOG00000001243	Zcchc8	100	90.254	Rattus_norvegicus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	57.703	ENSRBIG00000044855	ZCCHC8	100	57.703	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.545	ENSRROG00000030441	ZCCHC8	100	76.545	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027732	Zcchc8	100	77.343	ENSSBOG00000032964	ZCCHC8	100	79.739	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027732	Zcchc8	79	90.476	ENSSHAG00000010725	ZCCHC8	99	65.560	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027732	Zcchc8	79	79.012	ENSSFOG00015018295	zcchc8	99	47.715	Scleropages_formosus
MGP_CAROLIEiJ_G0027732	Zcchc8	80	90.244	ENSSARG00000003982	ZCCHC8	100	68.521	Sorex_araneus
MGP_CAROLIEiJ_G0027732	Zcchc8	79	86.420	ENSSPUG00000011326	ZCCHC8	95	60.302	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.523	ENSSSCG00000009792	ZCCHC8	89	79.383	Sus_scrofa
MGP_CAROLIEiJ_G0027732	Zcchc8	79	87.654	ENSTGUG00000006286	ZCCHC8	98	60.692	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027732	Zcchc8	76	48.718	ENSTRUG00000008040	zcchc8	92	43.932	Takifugu_rubripes
MGP_CAROLIEiJ_G0027732	Zcchc8	78	61.250	ENSTNIG00000015824	zcchc8	99	38.822	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027732	Zcchc8	100	76.578	ENSTTRG00000015809	ZCCHC8	100	76.438	Tursiops_truncatus
MGP_CAROLIEiJ_G0027732	Zcchc8	80	95.122	ENSUAMG00000013723	ZCCHC8	99	81.550	Ursus_americanus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	80.952	ENSUMAG00000005282	ZCCHC8	100	82.430	Ursus_maritimus
MGP_CAROLIEiJ_G0027732	Zcchc8	100	79.944	ENSVVUG00000017779	ZCCHC8	99	81.364	Vulpes_vulpes
MGP_CAROLIEiJ_G0027732	Zcchc8	79	81.481	ENSXETG00000007797	zcchc8	99	52.703	Xenopus_tropicalis