EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027744 (Gene tree)
Gene ID: 110294745
Gene Symbol: Arl6ip4
Alias: Aip-4|Srp25
Full Name: ADP ribosylation factor like GTPase 6 interacting protein 4
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 2121 bases
Position: chr5:117118748-117120868
Accession: 110294745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070813	SR-25	PF10500.9	2.5e-101	1	1
MGP_CAROLIEiJ_P0070815	SR-25	PF10500.9	9.7e-91	1	1
MGP_CAROLIEiJ_P0070814	SR-25	PF10500.9	2.2e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070816	-	294	-	MGP_CAROLIEiJ_P0070816	60 (aa)	-	UPI000620AC11
MGP_CAROLIEiJ_T0070814	-	1006	-	MGP_CAROLIEiJ_P0070814	200 (aa)	-	-
MGP_CAROLIEiJ_T0070815	-	917	-	MGP_CAROLIEiJ_P0070815	228 (aa)	-	-
MGP_CAROLIEiJ_T0070813	-	1215	XM_021163179	MGP_CAROLIEiJ_P0070813	229 (aa)	XP_021018838	UPI000A31A7B6

Gene Model

Click here to download MGP_CAROLIEiJ_G0027744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	77.889	ENSG00000182196	ARL6IP4	91	79.621	Homo_sapiens
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	66.055	ENSAMEG00000015055	-	74	65.596	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	81.500	ENSANAG00000035845	ARL6IP4	91	80.861	Aotus_nancymaae
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	86.139	ENSBTAG00000001594	ARL6IP4	91	84.834	Bos_taurus
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	76.768	ENSCJAG00000016476	-	91	77.295	Callithrix_jacchus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	75.000	ENSCAFG00000007665	ARL6IP4	91	79.147	Canis_familiaris
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	74.408	ENSCAFG00020016288	-	91	78.571	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	81.683	ENSCHIG00000014369	-	91	80.569	Capra_hircus
MGP_CAROLIEiJ_G0027744	Arl6ip4	98	78.000	ENSTSYG00000030992	ARL6IP4	91	80.569	Carlito_syrichta
MGP_CAROLIEiJ_G0027744	Arl6ip4	54	90.654	ENSCAPG00000015583	-	67	88.991	Cavia_aperea
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	75.120	ENSCPOG00000031539	-	91	77.251	Cavia_porcellus
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	79.500	ENSCCAG00000037235	ARL6IP4	90	78.947	Cebus_capucinus
MGP_CAROLIEiJ_G0027744	Arl6ip4	82	81.579	ENSCATG00000000284	-	50	80.000	Cercocebus_atys
MGP_CAROLIEiJ_G0027744	Arl6ip4	82	84.293	ENSCATG00000004525	-	91	79.147	Cercocebus_atys
MGP_CAROLIEiJ_G0027744	Arl6ip4	53	83.962	ENSCLAG00000008050	-	62	85.849	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027744	Arl6ip4	87	78.736	ENSCSAG00000002076	ARL6IP4	53	78.919	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027744	Arl6ip4	81	80.749	ENSCANG00000008517	ARL6IP4	57	75.799	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027744	Arl6ip4	95	85.714	ENSCGRG00001024174	Arl6ip4	90	86.893	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027744	Arl6ip4	95	85.714	ENSCGRG00000002843	Arl6ip4	90	86.893	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027744	Arl6ip4	82	81.675	ENSDNOG00000044908	-	95	82.199	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027744	Arl6ip4	87	83.708	ENSDORG00000023896	Arl6ip4	60	96.262	Dipodomys_ordii
MGP_CAROLIEiJ_G0027744	Arl6ip4	78	78.333	ENSETEG00000008410	ARL6IP4	63	76.526	Echinops_telfairi
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	80.687	ENSEASG00005012544	-	91	80.952	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	80.258	ENSECAG00000023197	ARL6IP4	91	80.952	Equus_caballus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	81.517	ENSFCAG00000006132	-	91	81.043	Felis_catus
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	76.293	ENSFDAG00000009535	-	100	78.632	Fukomys_damarensis
MGP_CAROLIEiJ_G0027744	Arl6ip4	51	55.882	ENSGMOG00000012151	arl6ip4	54	58.763	Gadus_morhua
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	75.845	ENSGGOG00000042717	ARL6IP4	51	77.626	Gorilla_gorilla
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.512	ENSHGLG00000011726	-	91	80.095	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.512	ENSHGLG00100018434	-	91	80.095	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	78.392	ENSSTOG00000010405	-	91	80.569	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027744	Arl6ip4	98	83.590	ENSJJAG00000019114	Arl6ip4	90	85.437	Jaculus_jaculus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.619	ENSLAFG00000005314	-	91	79.621	Loxodonta_africana
MGP_CAROLIEiJ_G0027744	Arl6ip4	81	83.069	ENSMFAG00000034524	ARL6IP4	53	83.069	Macaca_fascicularis
MGP_CAROLIEiJ_G0027744	Arl6ip4	81	83.069	ENSMMUG00000015930	ARL6IP4	87	83.069	Macaca_mulatta
MGP_CAROLIEiJ_G0027744	Arl6ip4	82	80.526	ENSMNEG00000015953	ARL6IP4	91	79.048	Macaca_nemestrina
MGP_CAROLIEiJ_G0027744	Arl6ip4	52	83.495	ENSMGAG00000003506	ARL6IP4	55	83.495	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027744	Arl6ip4	94	84.492	ENSMAUG00000018929	Arl6ip4	90	86.408	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027744	Arl6ip4	88	76.699	ENSMICG00000032330	-	90	75.362	Microcebus_murinus
MGP_CAROLIEiJ_G0027744	Arl6ip4	95	85.185	ENSMOCG00000001258	Arl6ip4	90	87.864	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	97.817	ENSMUSG00000029404	Arl6ip4	100	97.959	Mus_musculus
MGP_CAROLIEiJ_G0027744	Arl6ip4	98	82.234	MGP_PahariEiJ_G0024324	Arl6ip4	89	88.462	Mus_pahari
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	98.690	MGP_SPRETEiJ_G0028742	Arl6ip4	100	98.690	Mus_spretus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	82.192	ENSMPUG00000001705	ARL6IP4	75	81.735	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	81.034	ENSNGAG00000023492	Arl6ip4	91	84.689	Nannospalax_galili
MGP_CAROLIEiJ_G0027744	Arl6ip4	98	67.980	ENSNLEG00000002378	-	91	71.963	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	56.000	ENSODEG00000015865	-	52	67.890	Octodon_degus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.251	ENSODEG00000010162	-	91	76.303	Octodon_degus
MGP_CAROLIEiJ_G0027744	Arl6ip4	52	58.252	ENSORLG00020016925	arl6ip4	50	54.098	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027744	Arl6ip4	97	70.103	ENSOGAG00000015951	-	73	70.388	Otolemur_garnettii
MGP_CAROLIEiJ_G0027744	Arl6ip4	81	83.069	ENSOARG00000007010	ARL6IP4	69	77.169	Ovis_aries
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	74.879	ENSPPAG00000028900	ARL6IP4	51	76.712	Pan_paniscus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	81.517	ENSPPRG00000003154	-	91	81.043	Panthera_pardus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	76.056	ENSPTIG00000020573	-	91	76.056	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	75.362	ENSPTRG00000005590	ARL6IP4	51	77.169	Pan_troglodytes
MGP_CAROLIEiJ_G0027744	Arl6ip4	83	75.789	ENSPANG00000029614	-	90	75.714	Papio_anubis
MGP_CAROLIEiJ_G0027744	Arl6ip4	98	84.184	ENSPEMG00000008921	Arl6ip4	90	88.350	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027744	Arl6ip4	52	85.437	ENSPCIG00000003197	-	72	56.477	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	79.710	ENSPCOG00000018734	-	91	83.575	Propithecus_coquereli
MGP_CAROLIEiJ_G0027744	Arl6ip4	84	90.306	ENSRNOG00000001080	Arl6ip4	90	89.474	Rattus_norvegicus
MGP_CAROLIEiJ_G0027744	Arl6ip4	100	66.524	ENSRROG00000028559	-	82	73.016	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027744	Arl6ip4	86	83.168	ENSSBOG00000033244	-	91	76.303	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027744	Arl6ip4	52	84.466	ENSSHAG00000013731	-	79	64.091	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027744	Arl6ip4	51	56.364	ENSSDUG00000020259	arl6ip4	91	51.152	Seriola_dumerili
MGP_CAROLIEiJ_G0027744	Arl6ip4	81	84.127	ENSSSCG00000009782	-	91	77.169	Sus_scrofa
MGP_CAROLIEiJ_G0027744	Arl6ip4	85	76.531	ENSTBEG00000000080	ARL6IP4	65	73.023	Tupaia_belangeri
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.619	ENSUAMG00000000545	-	91	77.619	Ursus_americanus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	77.143	ENSUMAG00000004427	-	91	77.143	Ursus_maritimus
MGP_CAROLIEiJ_G0027744	Arl6ip4	90	74.882	ENSVVUG00000028080	-	91	79.048	Vulpes_vulpes