EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027747 (Gene tree)
Gene ID: 110295021
Gene Symbol: 2810006K23Rik
Alias: -
Full Name: chromosome 5 C12orf65 homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 13834 bases
Position: chr5:117329006-117342839
Accession: 110295021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0070839	RF-1	PF00472.20	9.4e-21	1	1
MGP_CAROLIEiJ_P0070838	RF-1	PF00472.20	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0070838	-	1648	-	MGP_CAROLIEiJ_P0070838	128 (aa)	-	-
MGP_CAROLIEiJ_T0070839	-	1377	XM_021163465	MGP_CAROLIEiJ_P0070839	184 (aa)	XP_021019124	UPI000A318389

Gene Model

Click here to download MGP_CAROLIEiJ_G0027747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	76.552	ENSG00000130921	C12orf65	94	77.863	Homo_sapiens
MGP_CAROLIEiJ_G0027747	2810006K23Rik	70	59.690	ENSAPOG00000000995	si:ch211-275j6.5	60	65.657	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	88	52.137	ENSAMEG00000015144	C12orf65	74	70.312	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0027747	2810006K23Rik	69	60.156	ENSACIG00000001644	si:ch211-275j6.5	61	66.327	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	70	60.465	ENSAOCG00000005589	si:ch211-275j6.5	63	66.667	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027747	2810006K23Rik	79	55.862	ENSAPEG00000024618	si:ch211-275j6.5	73	58.824	Amphiprion_percula
MGP_CAROLIEiJ_G0027747	2810006K23Rik	91	50.299	ENSATEG00000011661	si:ch211-275j6.5	62	53.077	Anabas_testudineus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	63	75.652	ENSAPLG00000016073	C12orf65	73	81.818	Anas_platyrhynchos
MGP_CAROLIEiJ_G0027747	2810006K23Rik	85	63.924	ENSACAG00000015561	C12orf65	64	64.341	Anolis_carolinensis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	55.200	ENSANAG00000022881	C12orf65	79	76.336	Aotus_nancymaae
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	58.993	ENSACLG00000023906	si:ch211-275j6.5	60	65.306	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027747	2810006K23Rik	69	57.778	ENSAMXG00000031765	si:ch211-275j6.5	75	57.724	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	74.545	ENSBTAG00000020503	C17H12orf65	76	74.046	Bos_taurus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	56.349	ENSCJAG00000016579	C12orf65	79	76.336	Callithrix_jacchus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	72.121	ENSCAFG00000007512	C26H12orf65	54	70.992	Canis_familiaris
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	72.121	ENSCAFG00020016169	C12orf65	78	70.992	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	74.390	ENSCHIG00000022229	C12orf65	73	74.046	Capra_hircus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	75.000	ENSCAPG00000014691	C12orf65	95	75.000	Cavia_aperea
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	75.568	ENSCPOG00000007583	C12orf65	95	75.568	Cavia_porcellus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	74.497	ENSCATG00000040685	C12orf65	78	76.923	Cercocebus_atys
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	75.706	ENSCLAG00000014329	C12orf65	95	75.706	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	74.497	ENSCSAG00000002068	C12orf65	79	75.556	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	64.286	ENSCPBG00000025970	C12orf65	66	65.455	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	85.870	ENSCGRG00001013424	2810006K23Rik	100	85.870	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	85.870	ENSCGRG00000003037	2810006K23Rik	100	85.870	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	56.338	ENSCSEG00000014536	si:ch211-275j6.5	63	62.857	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	58.042	ENSCVAG00000023000	si:ch211-275j6.5	59	64.078	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	68	55.200	ENSDARG00000097803	si:ch211-275j6.5	68	64.516	Danio_rerio
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	48.000	ENSDNOG00000034728	C12orf65	78	67.176	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	93	71.098	ENSDORG00000026069	2810006K23Rik	99	71.098	Dipodomys_ordii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	66	45.455	FBgn0050100	CG30100	64	50.538	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027747	2810006K23Rik	71	58.511	ENSETEG00000005627	C12orf65	63	83.000	Echinops_telfairi
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	56.800	ENSEASG00005012587	C12orf65	78	76.336	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	56.800	ENSECAG00000001057	C8H12orf65	78	76.336	Equus_caballus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	55.200	ENSEEUG00000007231	C12orf65	78	74.046	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	54.795	ENSELUG00000015178	lg13h12orf65	72	56.667	Esox_lucius
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	57.937	ENSFCAG00000015328	C12orf65	78	75.758	Felis_catus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	60.544	ENSFALG00000009261	C12orf65	68	64.912	Ficedula_albicollis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	70	60.465	ENSFHEG00000017567	si:ch211-275j6.5	57	67.010	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	64	62.393	ENSGMOG00000012139	si:ch211-275j6.5	62	66.304	Gadus_morhua
MGP_CAROLIEiJ_G0027747	2810006K23Rik	63	69.565	ENSGALG00000029390	C15H12ORF65	53	75.862	Gallus_gallus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	74	57.554	ENSGACG00000008255	si:ch211-275j6.5	67	62.385	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	53.333	ENSGAGG00000000823	C12orf65	73	69.091	Gopherus_agassizii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	76.552	ENSGGOG00000012850	C12orf65	78	77.863	Gorilla_gorilla
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	58.993	ENSHBUG00000007273	si:ch211-275j6.5	60	65.306	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027747	2810006K23Rik	98	55.814	ENSHGLG00000010966	C12orf65	72	72.593	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027747	2810006K23Rik	98	55.814	ENSHGLG00100018631	C12orf65	72	72.593	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027747	2810006K23Rik	67	64.516	ENSHCOG00000019848	si:ch211-275j6.5	55	70.213	Hippocampus_comes
MGP_CAROLIEiJ_G0027747	2810006K23Rik	73	58.519	ENSIPUG00000020793	si:ch211-275j6.5	61	61.905	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	91	73.810	ENSSTOG00000016463	C12orf65	75	74.809	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	96	71.910	ENSJJAG00000023360	2810006K23Rik	96	71.111	Jaculus_jaculus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	64	62.393	ENSKMAG00000018733	si:ch211-275j6.5	54	70.115	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	66	67.769	ENSLACG00000017355	C12orf65	58	71.579	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027747	2810006K23Rik	65	67.227	ENSLOCG00000005702	si:ch211-275j6.5	77	69.892	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	87	68.750	ENSLAFG00000002134	C12orf65	77	68.504	Loxodonta_africana
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	74.497	ENSMMUG00000031495	C12orf65	78	76.923	Macaca_mulatta
MGP_CAROLIEiJ_G0027747	2810006K23Rik	98	55.039	ENSMNEG00000044673	C12orf65	78	76.923	Macaca_nemestrina
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	74.497	ENSMLEG00000044309	C12orf65	78	76.923	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	70	62.121	ENSMAMG00000017366	si:ch211-275j6.5	59	68.627	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	58.993	ENSMZEG00005000938	si:ch211-275j6.5	60	65.306	Maylandia_zebra
MGP_CAROLIEiJ_G0027747	2810006K23Rik	88	58.788	ENSMGAG00000003354	C12orf65	84	60.145	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	68.800	ENSMAUG00000010304	2810006K23Rik	99	87.200	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	56.000	ENSMICG00000037138	C12orf65	78	74.809	Microcebus_murinus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	99	84.783	ENSMOCG00000017477	2810006K23Rik	100	84.324	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027747	2810006K23Rik	73	58.209	ENSMMOG00000017134	si:ch211-275j6.5	55	67.391	Mola_mola
MGP_CAROLIEiJ_G0027747	2810006K23Rik	82	72.185	ENSMODG00000012450	C12orf65	70	71.311	Monodelphis_domestica
MGP_CAROLIEiJ_G0027747	2810006K23Rik	65	62.185	ENSMALG00000012291	si:ch211-275j6.5	69	58.621	Monopterus_albus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	95.676	ENSMUSG00000047635	2810006K23Rik	100	95.676	Mus_musculus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	95.135	MGP_SPRETEiJ_G0028745	2810006K23Rik	100	95.135	Mus_spretus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	80.576	ENSMPUG00000001679	C12orf65	60	80.000	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	69.880	ENSMLUG00000007001	C12orf65	76	71.654	Myotis_lucifugus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	100	72.826	ENSNGAG00000010625	2810006K23Rik	100	72.826	Nannospalax_galili
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	58.273	ENSNBRG00000008082	si:ch211-275j6.5	60	65.306	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	77.241	ENSNLEG00000001470	C12orf65	79	78.030	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027747	2810006K23Rik	85	69.427	ENSMEUG00000009430	C12orf65	83	66.667	Notamacropus_eugenii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	84	66.883	ENSOPRG00000011029	C12orf65	79	65.354	Ochotona_princeps
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	76.829	ENSODEG00000011382	-	75	77.099	Octodon_degus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	72	58.647	ENSONIG00000013298	si:ch211-275j6.5	56	67.021	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	86	65.625	ENSOANG00000012866	C12orf65	73	65.625	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	98	52.713	ENSOCUG00000011888	C12orf65	93	70.370	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	56.115	ENSORLG00000006153	si:ch211-275j6.5	65	60.550	Oryzias_latipes
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	56.115	ENSORLG00020017188	si:ch211-275j6.5	65	60.550	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	56.115	ENSORLG00015005780	c9h12orf65	65	60.550	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	55.556	ENSOMEG00000001663	si:ch211-275j6.5	55	65.957	Oryzias_melastigma
MGP_CAROLIEiJ_G0027747	2810006K23Rik	94	50.806	ENSOGAG00000010778	C12orf65	79	70.769	Otolemur_garnettii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	90	73.494	ENSOARG00000005214	C12orf65	78	72.932	Ovis_aries
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	76.552	ENSPPAG00000029654	C12orf65	78	77.863	Pan_paniscus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	74.096	ENSPPRG00000024772	C12orf65	78	75.000	Panthera_pardus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	74.096	ENSPTIG00000011744	C12orf65	78	75.000	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	76.552	ENSPTRG00000005595	C12H12orf65	78	77.863	Pan_troglodytes
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	75.862	ENSPANG00000015388	C12orf65	78	77.099	Papio_anubis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	61.871	ENSPKIG00000001571	si:ch211-275j6.5	67	61.062	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	64.286	ENSPSIG00000013010	C12orf65	60	67.273	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	56.643	ENSPMGG00000018342	si:ch211-275j6.5	59	65.000	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	57	56.731	ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	Petromyzon_marinus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	85	68.354	ENSPCIG00000010996	C12orf65	75	65.649	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	79	58.621	ENSPLAG00000001661	si:ch211-275j6.5	62	63.063	Poecilia_latipinna
MGP_CAROLIEiJ_G0027747	2810006K23Rik	79	59.310	ENSPMEG00000018566	si:ch211-275j6.5	62	63.964	Poecilia_mexicana
MGP_CAROLIEiJ_G0027747	2810006K23Rik	79	59.310	ENSPMEG00000009201	si:ch211-275j6.5	62	63.964	Poecilia_mexicana
MGP_CAROLIEiJ_G0027747	2810006K23Rik	65	64.706	ENSPREG00000021268	si:ch211-275j6.5	62	62.162	Poecilia_reticulata
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	76.552	ENSPPYG00000005082	C12orf65	78	77.863	Pongo_abelii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	71	67.939	ENSPCAG00000016193	C12orf65	79	67.407	Procavia_capensis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	55.200	ENSPCOG00000021574	C12orf65	73	75.573	Propithecus_coquereli
MGP_CAROLIEiJ_G0027747	2810006K23Rik	90	71.084	ENSPVAG00000015301	C12orf65	78	70.455	Pteropus_vampyrus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	75	58.993	ENSPNYG00000014456	si:ch211-275j6.5	60	65.306	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027747	2810006K23Rik	69	59.843	ENSPNAG00000019769	si:ch211-275j6.5	55	64.516	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027747	2810006K23Rik	98	89.503	ENSRNOG00000001073	RGD1563482	99	89.503	Rattus_norvegicus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	74.483	ENSRBIG00000040789	C12orf65	78	75.573	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027747	2810006K23Rik	80	72.483	ENSRROG00000031384	C12orf65	79	73.333	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	56.000	ENSSBOG00000026629	C12orf65	76	77.099	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	93	66.082	ENSSHAG00000014988	C12orf65	72	66.917	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027747	2810006K23Rik	68	65.600	ENSSFOG00015019122	si:ch211-275j6.5	53	69.565	Scleropages_formosus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	64	65.812	ENSSMAG00000016770	si:ch211-275j6.5	57	67.347	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	71	60.305	ENSSDUG00000020401	si:ch211-275j6.5	59	65.625	Seriola_dumerili
MGP_CAROLIEiJ_G0027747	2810006K23Rik	67	63.415	ENSSLDG00000017638	si:ch211-275j6.5	53	69.663	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	72	63.158	ENSSPUG00000012613	C12orf65	62	67.327	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	65	62.185	ENSSPAG00000023476	si:ch211-275j6.5	53	68.539	Stegastes_partitus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	58.400	ENSSSCG00000009774	C12orf65	87	77.692	Sus_scrofa
MGP_CAROLIEiJ_G0027747	2810006K23Rik	65	65.000	ENSTGUG00000005440	C12orf65	71	69.231	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027747	2810006K23Rik	73	56.934	ENSTNIG00000015832	si:ch211-275j6.5	57	60.748	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027747	2810006K23Rik	95	54.762	ENSTBEG00000012500	C12orf65	78	74.242	Tupaia_belangeri
MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	77.241	ENSTTRG00000015880	C12orf65	79	77.099	Tursiops_truncatus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	91	53.782	ENSUAMG00000019669	C12orf65	76	71.654	Ursus_americanus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	91	53.782	ENSUMAG00000004025	C12orf65	76	71.654	Ursus_maritimus
MGP_CAROLIEiJ_G0027747	2810006K23Rik	89	71.515	ENSVVUG00000027811	C12orf65	78	70.229	Vulpes_vulpes
MGP_CAROLIEiJ_G0027747	2810006K23Rik	76	58.993	ENSXCOG00000000975	si:ch211-275j6.5	59	64.486	Xiphophorus_couchianus