EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027801 (Gene tree)
Gene ID: 110294411
Gene Symbol: Tyw1
Alias: Rsafd1
Full Name: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 87660 bases
Position: chr5:123090756-123178415
Accession: 110294411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0071125	Wyosine_form	PF08608.12	2.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0071125	-	3048	-	MGP_CAROLIEiJ_P0071125	721 (aa)	XP_021018291	UPI000A315055
MGP_CAROLIEiJ_T0071124	-	4746	-	MGP_CAROLIEiJ_P0071124	457 (aa)	-	-
MGP_CAROLIEiJ_T0071127	-	771	-	MGP_CAROLIEiJ_P0071127	234 (aa)	-	-
MGP_CAROLIEiJ_T0071126	-	1886	-	MGP_CAROLIEiJ_P0071126	394 (aa)	-	-
MGP_CAROLIEiJ_T0071123	-	4746	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027801	Tyw1	99	71.012	ENSG00000277149	TYW1B	99	71.012	Homo_sapiens
MGP_CAROLIEiJ_G0027801	Tyw1	99	80.468	ENSG00000198874	TYW1	99	80.468	Homo_sapiens
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.667	ENSAPOG00000014391	tyw1	100	63.099	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027801	Tyw1	98	64.895	ENSACIG00000007325	tyw1	99	64.146	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.158	ENSAOCG00000016792	tyw1	96	65.603	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.158	ENSAPEG00000015939	tyw1	99	66.916	Amphiprion_percula
MGP_CAROLIEiJ_G0027801	Tyw1	90	65.549	ENSATEG00000006856	tyw1	91	65.549	Anabas_testudineus
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.279	ENSANAG00000037051	-	100	78.279	Aotus_nancymaae
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.036	ENSACLG00000018688	tyw1	96	66.482	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.080	ENSAMXG00000004157	tyw1	99	66.942	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.933	ENSBTAG00000008446	TYW1	100	78.933	Bos_taurus
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.142	ENSCJAG00000004295	-	100	78.142	Callithrix_jacchus
MGP_CAROLIEiJ_G0027801	Tyw1	100	77.112	ENSCAFG00000010867	-	100	77.112	Canis_familiaris
MGP_CAROLIEiJ_G0027801	Tyw1	99	69.028	ENSCAFG00020005367	-	98	72.555	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.891	ENSCHIG00000019510	-	100	79.891	Capra_hircus
MGP_CAROLIEiJ_G0027801	Tyw1	90	80.243	ENSTSYG00000008236	-	100	80.243	Carlito_syrichta
MGP_CAROLIEiJ_G0027801	Tyw1	88	73.742	ENSCAPG00000013569	-	100	73.742	Cavia_aperea
MGP_CAROLIEiJ_G0027801	Tyw1	99	76.113	ENSCPOG00000011182	-	99	76.766	Cavia_porcellus
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.415	ENSCCAG00000026643	-	100	78.415	Cebus_capucinus
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.645	ENSCATG00000043677	-	100	79.645	Cercocebus_atys
MGP_CAROLIEiJ_G0027801	Tyw1	99	77.657	ENSCLAG00000006321	-	99	77.657	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027801	Tyw1	99	68.923	ENSCSAG00000018274	-	99	68.923	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027801	Tyw1	67	89.744	ENSCHOG00000003801	-	75	89.744	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0027801	Tyw1	99	70.300	ENSCPBG00000014896	-	96	74.679	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0027801	Tyw1	81	58.574	ENSCING00000004125	-	97	58.404	Ciona_intestinalis
MGP_CAROLIEiJ_G0027801	Tyw1	89	53.632	ENSCSAVG00000005712	-	100	54.615	Ciona_savignyi
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.645	ENSCANG00000033209	-	100	79.645	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027801	Tyw1	71	93.533	ENSCGRG00001003679	Tyw1	88	93.533	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.480	ENSCSEG00000005810	tyw1	94	66.480	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027801	Tyw1	90	65.138	ENSCVAG00000001054	tyw1	92	64.832	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.437	ENSDARG00000062987	tyw1	96	66.713	Danio_rerio
MGP_CAROLIEiJ_G0027801	Tyw1	99	80.468	ENSDNOG00000024165	-	99	80.055	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.805	ENSDORG00000014772	Tyw1	99	66.805	Dipodomys_ordii
MGP_CAROLIEiJ_G0027801	Tyw1	51	53.388	ENSETEG00000009904	-	83	53.388	Echinops_telfairi
MGP_CAROLIEiJ_G0027801	Tyw1	60	70.833	ENSEBUG00000004494	tyw1	91	70.833	Eptatretus_burgeri
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.589	ENSEASG00005008818	-	100	79.589	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027801	Tyw1	100	71.781	ENSECAG00000023164	-	100	71.781	Equus_caballus
MGP_CAROLIEiJ_G0027801	Tyw1	62	89.796	ENSEEUG00000005950	-	62	89.796	Erinaceus_europaeus
MGP_CAROLIEiJ_G0027801	Tyw1	99	65.536	ENSELUG00000008449	tyw1	98	65.868	Esox_lucius
MGP_CAROLIEiJ_G0027801	Tyw1	100	76.839	ENSFCAG00000014262	-	100	76.158	Felis_catus
MGP_CAROLIEiJ_G0027801	Tyw1	99	65.890	ENSFALG00000013810	-	100	65.847	Ficedula_albicollis
MGP_CAROLIEiJ_G0027801	Tyw1	99	76.398	ENSFDAG00000013270	-	99	76.398	Fukomys_damarensis
MGP_CAROLIEiJ_G0027801	Tyw1	84	66.558	ENSFHEG00000020824	tyw1	81	66.558	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.982	ENSGALG00000001110	-	99	68.529	Gallus_gallus
MGP_CAROLIEiJ_G0027801	Tyw1	99	65.830	ENSGACG00000012692	tyw1	98	64.917	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027801	Tyw1	99	69.697	ENSGAGG00000022393	-	99	69.697	Gopherus_agassizii
MGP_CAROLIEiJ_G0027801	Tyw1	89	71.560	ENSGGOG00000001473	TYW1	99	71.560	Gorilla_gorilla
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.898	ENSHBUG00000002640	tyw1	96	66.343	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027801	Tyw1	88	75.781	ENSHGLG00000012093	-	100	75.781	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.112	ENSHGLG00100011743	TYW1	100	78.112	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027801	Tyw1	98	61.003	ENSHCOG00000019949	tyw1	96	61.003	Hippocampus_comes
MGP_CAROLIEiJ_G0027801	Tyw1	98	65.928	ENSIPUG00000016330	tyw1	95	66.064	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027801	Tyw1	99	77.610	ENSSTOG00000004067	-	91	78.434	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027801	Tyw1	99	81.492	ENSJJAG00000022959	Tyw1	99	82.873	Jaculus_jaculus
MGP_CAROLIEiJ_G0027801	Tyw1	98	65.556	ENSKMAG00000018599	tyw1	96	65.972	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027801	Tyw1	99	64.247	ENSLACG00000018917	tyw1	96	64.247	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.260	ENSLOCG00000004035	tyw1	96	66.896	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.918	ENSMFAG00000035457	-	100	79.918	Macaca_fascicularis
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.918	ENSMMUG00000030374	-	100	79.918	Macaca_mulatta
MGP_CAROLIEiJ_G0027801	Tyw1	100	80.055	ENSMNEG00000041992	-	100	80.055	Macaca_nemestrina
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.645	ENSMLEG00000039741	-	100	79.645	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027801	Tyw1	98	67.316	ENSMAMG00000016089	tyw1	94	66.759	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027801	Tyw1	92	70.721	ENSMZEG00005024386	tyw1	97	70.270	Maylandia_zebra
MGP_CAROLIEiJ_G0027801	Tyw1	99	68.392	ENSMGAG00000002176	-	99	68.392	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027801	Tyw1	99	90.569	ENSMAUG00000002959	Tyw1	99	90.569	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027801	Tyw1	99	80.165	ENSMICG00000014374	-	100	80.165	Microcebus_murinus
MGP_CAROLIEiJ_G0027801	Tyw1	99	87.673	ENSMOCG00000017720	Tyw1	99	87.950	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027801	Tyw1	98	62.113	ENSMMOG00000005064	tyw1	97	62.518	Mola_mola
MGP_CAROLIEiJ_G0027801	Tyw1	99	71.196	ENSMODG00000025697	-	99	71.020	Monodelphis_domestica
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.574	ENSMALG00000010238	tyw1	96	66.574	Monopterus_albus
MGP_CAROLIEiJ_G0027801	Tyw1	100	98.890	ENSMUSG00000056310	Tyw1	100	98.890	Mus_musculus
MGP_CAROLIEiJ_G0027801	Tyw1	100	93.897	MGP_PahariEiJ_G0024383	Tyw1	100	93.897	Mus_pahari
MGP_CAROLIEiJ_G0027801	Tyw1	100	98.474	MGP_SPRETEiJ_G0028799	Tyw1	100	98.474	Mus_spretus
MGP_CAROLIEiJ_G0027801	Tyw1	95	76.633	ENSMPUG00000016191	-	99	75.617	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027801	Tyw1	99	76.027	ENSMLUG00000013582	-	99	76.027	Myotis_lucifugus
MGP_CAROLIEiJ_G0027801	Tyw1	99	81.717	ENSNGAG00000002742	Tyw1	99	80.886	Nannospalax_galili
MGP_CAROLIEiJ_G0027801	Tyw1	92	68.175	ENSNBRG00000016996	tyw1	99	65.286	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027801	Tyw1	99	78.297	ENSNLEG00000013210	-	98	78.297	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027801	Tyw1	92	62.369	ENSOPRG00000008734	-	88	62.369	Ochotona_princeps
MGP_CAROLIEiJ_G0027801	Tyw1	99	70.972	ENSODEG00000014729	-	99	71.151	Octodon_degus
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.872	ENSONIG00000005872	tyw1	96	67.316	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027801	Tyw1	99	78.434	ENSOCUG00000003173	-	99	78.434	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.852	ENSORLG00000001393	tyw1	98	64.903	Oryzias_latipes
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.990	ENSORLG00020019361	tyw1	98	65.278	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.481	ENSORLG00015008095	tyw1	95	65.374	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027801	Tyw1	94	82.018	ENSOGAG00000016555	-	98	79.694	Otolemur_garnettii
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.076	ENSOARG00000010673	-	100	79.076	Ovis_aries
MGP_CAROLIEiJ_G0027801	Tyw1	100	77.503	ENSPPRG00000004945	-	100	76.818	Panthera_pardus
MGP_CAROLIEiJ_G0027801	Tyw1	100	77.641	ENSPTIG00000019545	-	100	76.955	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027801	Tyw1	99	74.419	ENSPTRG00000023076	TYW1B	98	74.419	Pan_troglodytes
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.508	ENSPANG00000019053	-	100	79.508	Papio_anubis
MGP_CAROLIEiJ_G0027801	Tyw1	99	65.975	ENSPKIG00000006545	tyw1	96	65.975	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027801	Tyw1	96	65.242	ENSPMGG00000004240	tyw1	99	64.074	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027801	Tyw1	100	89.641	ENSPEMG00000008274	Tyw1	100	89.641	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027801	Tyw1	98	67.364	ENSPFOG00000015855	tyw1	98	67.364	Poecilia_formosa
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.391	ENSPLAG00000000838	tyw1	98	65.882	Poecilia_latipinna
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.575	ENSPMEG00000019437	tyw1	100	64.095	Poecilia_mexicana
MGP_CAROLIEiJ_G0027801	Tyw1	98	64.476	ENSPREG00000018773	tyw1	96	64.575	Poecilia_reticulata
MGP_CAROLIEiJ_G0027801	Tyw1	100	80.055	ENSPPYG00000017514	TYW1	100	80.055	Pongo_abelii
MGP_CAROLIEiJ_G0027801	Tyw1	99	63.599	ENSPCOG00000015294	-	96	70.504	Propithecus_coquereli
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.036	ENSPNYG00000022381	tyw1	96	66.482	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027801	Tyw1	98	67.364	ENSPNAG00000009001	tyw1	98	67.503	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027801	Tyw1	99	93.620	ENSRNOG00000024352	Tyw1	99	93.620	Rattus_norvegicus
MGP_CAROLIEiJ_G0027801	Tyw1	100	79.508	ENSRBIG00000039619	-	100	79.508	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027801	Tyw1	99	79.945	ENSRROG00000039780	-	99	79.945	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027801	Tyw1	94	40.751	YPL207W	-	70	52.009	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0027801	Tyw1	100	77.869	ENSSBOG00000025873	-	100	77.869	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027801	Tyw1	99	70.765	ENSSHAG00000010346	-	100	71.667	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027801	Tyw1	98	68.531	ENSSFOG00015001054	tyw1	99	67.988	Scleropages_formosus
MGP_CAROLIEiJ_G0027801	Tyw1	99	65.742	ENSSMAG00000020514	tyw1	96	65.742	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.390	ENSSDUG00000001552	tyw1	94	69.865	Seriola_dumerili
MGP_CAROLIEiJ_G0027801	Tyw1	99	66.528	ENSSLDG00000003554	tyw1	96	65.890	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.671	ENSSPUG00000002715	-	99	68.493	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027801	Tyw1	100	78.904	ENSSSCG00000007733	-	100	78.904	Sus_scrofa
MGP_CAROLIEiJ_G0027801	Tyw1	90	66.566	ENSTGUG00000003428	-	99	66.566	Taeniopygia_guttata
MGP_CAROLIEiJ_G0027801	Tyw1	98	65.690	ENSTRUG00000016107	tyw1	93	65.411	Takifugu_rubripes
MGP_CAROLIEiJ_G0027801	Tyw1	91	71.214	ENSTNIG00000018999	tyw1	100	71.064	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027801	Tyw1	100	77.384	ENSUMAG00000015343	-	100	76.703	Ursus_maritimus
MGP_CAROLIEiJ_G0027801	Tyw1	99	76.986	ENSVVUG00000016457	-	99	76.986	Vulpes_vulpes
MGP_CAROLIEiJ_G0027801	Tyw1	99	67.919	ENSXETG00000010094	tyw1	99	68.622	Xenopus_tropicalis
MGP_CAROLIEiJ_G0027801	Tyw1	98	66.528	ENSXMAG00000013125	tyw1	99	66.616	Xiphophorus_maculatus