EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027845 (Gene tree)
Gene ID: 110294958
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 55356 bases
Position: chr5:128662480-128717835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0071369	cwf21	PF08312.12	9.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0071369	-	3234	-	MGP_CAROLIEiJ_P0071369	532 (aa)	-	-
MGP_CAROLIEiJ_T0071368	-	1938	-	MGP_CAROLIEiJ_P0071368	342 (aa)	-	-
MGP_CAROLIEiJ_T0071370	-	681	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0071371	-	482	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0027845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027845	-	97	90.361	ENSG00000177679	SRRM3	61	92.424	Homo_sapiens
MGP_CAROLIEiJ_G0027845	-	94	61.846	ENSACAG00000000452	SRRM3	50	64.685	Anolis_carolinensis
MGP_CAROLIEiJ_G0027845	-	97	82.840	ENSANAG00000031983	SRRM3	55	80.229	Aotus_nancymaae
MGP_CAROLIEiJ_G0027845	-	98	81.845	ENSBTAG00000007879	-	99	81.548	Bos_taurus
MGP_CAROLIEiJ_G0027845	-	97	91.265	ENSCJAG00000016307	SRRM3	52	90.801	Callithrix_jacchus
MGP_CAROLIEiJ_G0027845	-	99	89.181	ENSCAFG00000013537	SRRM3	73	89.619	Canis_familiaris
MGP_CAROLIEiJ_G0027845	-	98	75.893	ENSCHIG00000014018	SRRM3	55	70.326	Capra_hircus
MGP_CAROLIEiJ_G0027845	-	99	77.168	ENSCPOG00000038685	SRRM3	50	78.324	Cavia_porcellus
MGP_CAROLIEiJ_G0027845	-	97	91.867	ENSCCAG00000033359	SRRM3	52	91.395	Cebus_capucinus
MGP_CAROLIEiJ_G0027845	-	97	84.592	ENSCATG00000043129	SRRM3	57	81.899	Cercocebus_atys
MGP_CAROLIEiJ_G0027845	-	97	90.774	ENSCLAG00000007682	SRRM3	100	92.742	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027845	-	98	91.071	ENSCSAG00000018140	SRRM3	57	90.029	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027845	-	99	95.252	ENSCGRG00001011385	Srrm3	52	95.252	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027845	-	98	90.179	ENSEASG00005016840	-	89	90.179	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027845	-	98	90.149	ENSECAG00000022142	-	89	90.149	Equus_caballus
MGP_CAROLIEiJ_G0027845	-	98	90.476	ENSFCAG00000044112	SRRM3	52	90.476	Felis_catus
MGP_CAROLIEiJ_G0027845	-	72	65.447	ENSFDAG00000016913	SRRM3	100	96.296	Fukomys_damarensis
MGP_CAROLIEiJ_G0027845	-	84	68.041	ENSGALG00000001932	SRRM3	65	67.354	Gallus_gallus
MGP_CAROLIEiJ_G0027845	-	97	69.970	ENSHGLG00000015576	SRRM3	100	90.323	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027845	-	97	90.361	ENSSTOG00000014181	SRRM3	100	91.935	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027845	-	96	81.515	ENSJJAG00000023441	Srrm3	56	76.036	Jaculus_jaculus
MGP_CAROLIEiJ_G0027845	-	97	51.585	ENSLOCG00000002879	SRRM3	98	53.026	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027845	-	83	66.897	ENSMGAG00000003690	SRRM3	75	67.014	Meleagris_gallopavo
MGP_CAROLIEiJ_G0027845	-	99	93.175	ENSMAUG00000017613	Srrm3	100	94.355	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027845	-	98	91.071	ENSMICG00000010668	SRRM3	58	90.294	Microcebus_murinus
MGP_CAROLIEiJ_G0027845	-	99	94.955	ENSMOCG00000002565	Srrm3	52	94.955	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027845	-	100	99.415	ENSMUSG00000039860	Srrm3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027845	-	100	98.538	MGP_PahariEiJ_G0024425	Srrm3	100	99.194	Mus_pahari
MGP_CAROLIEiJ_G0027845	-	100	99.123	MGP_SPRETEiJ_G0028844	Srrm3	100	99.194	Mus_spretus
MGP_CAROLIEiJ_G0027845	-	98	76.786	ENSNLEG00000008423	-	56	73.143	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027845	-	97	90.060	ENSODEG00000015988	SRRM3	53	89.150	Octodon_degus
MGP_CAROLIEiJ_G0027845	-	84	55.068	ENSONIG00000012732	-	50	56.314	Oreochromis_niloticus
MGP_CAROLIEiJ_G0027845	-	95	55.287	ENSOANG00000004590	-	57	52.422	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027845	-	96	89.394	ENSOGAG00000030805	SRRM3	52	88.496	Otolemur_garnettii
MGP_CAROLIEiJ_G0027845	-	95	79.880	ENSOARG00000013722	SRRM3	51	80.488	Ovis_aries
MGP_CAROLIEiJ_G0027845	-	97	90.361	ENSPTRG00000019317	SRRM3	52	90.208	Pan_troglodytes
MGP_CAROLIEiJ_G0027845	-	98	74.107	ENSPCAG00000013700	SRRM3	58	75.595	Procavia_capensis
MGP_CAROLIEiJ_G0027845	-	99	88.856	ENSPCOG00000028464	SRRM3	51	89.881	Propithecus_coquereli
MGP_CAROLIEiJ_G0027845	-	99	95.252	ENSRNOG00000001439	Srrm3	52	95.252	Rattus_norvegicus
MGP_CAROLIEiJ_G0027845	-	99	91.098	ENSRROG00000034980	SRRM3	62	91.098	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027845	-	90	52.229	ENSSFOG00015001696	SRRM3	63	53.623	Scleropages_formosus
MGP_CAROLIEiJ_G0027845	-	58	80.374	ENSSPUG00000006285	SRRM3	58	80.374	Sphenodon_punctatus
MGP_CAROLIEiJ_G0027845	-	81	47.945	ENSTNIG00000008549	-	50	47.432	Tetraodon_nigroviridis