EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0027876 (Gene tree)
Gene ID: 110295064
Gene Symbol: Pop7
Alias: 0610037N12Rik|Rpp20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 1063 bases
Position: chr5:130304573-130305635
Accession: 110295064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0071506	Alba	PF01918.21	3.7e-09	1	1
MGP_CAROLIEiJ_P0071507	Alba	PF01918.21	3.7e-09	1	1
MGP_CAROLIEiJ_P0071506	Rpp20	PF12328.8	4.4e-20	1	1
MGP_CAROLIEiJ_P0071507	Rpp20	PF12328.8	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0071507	-	862	-	MGP_CAROLIEiJ_P0071507	140 (aa)	XP_021019181	UPI00000232B5
MGP_CAROLIEiJ_T0071506	-	970	-	MGP_CAROLIEiJ_P0071506	140 (aa)	XP_021019181	UPI00000232B5

Gene Model

Click here to download MGP_CAROLIEiJ_G0027876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0027876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSG00000172336	POP7	100	95.000	Homo_sapiens
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSAPOG00000015722	pop7	91	72.093	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0027876	Pop7	94	69.925	ENSACIG00000022071	pop7	93	72.180	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSAOCG00000021222	pop7	82	72.093	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSAPEG00000018819	pop7	82	72.093	Amphiprion_percula
MGP_CAROLIEiJ_G0027876	Pop7	96	69.343	ENSATEG00000017615	pop7	88	69.343	Anabas_testudineus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSANAG00000019054	POP7	100	94.286	Aotus_nancymaae
MGP_CAROLIEiJ_G0027876	Pop7	87	74.194	ENSACLG00000018898	pop7	79	74.194	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0027876	Pop7	95	71.111	ENSAMXG00000025789	pop7	92	71.111	Astyanax_mexicanus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSCJAG00000015056	POP7	100	94.286	Callithrix_jacchus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSCAFG00000014205	POP7	100	95.000	Canis_familiaris
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSCAFG00020013863	POP7	100	95.000	Canis_lupus_dingo
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSCHIG00000013484	POP7	100	95.714	Capra_hircus
MGP_CAROLIEiJ_G0027876	Pop7	100	93.571	ENSTSYG00000035016	POP7	100	93.571	Carlito_syrichta
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSCPOG00000005767	POP7	100	96.429	Cavia_porcellus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSCCAG00000008898	POP7	100	94.286	Cebus_capucinus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSCATG00000010371	POP7	100	94.286	Cercocebus_atys
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSCLAG00000001541	POP7	100	96.429	Chinchilla_lanigera
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSCSAG00000017937	POP7	100	94.286	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSCANG00000000652	POP7	100	95.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSCGRG00001010593	Pop7	100	95.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSCGRG00000019940	Pop7	100	95.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSCSEG00000013197	pop7	96	72.093	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0027876	Pop7	91	71.318	ENSCVAG00000016728	pop7	82	71.318	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0027876	Pop7	90	71.094	ENSDARG00000036394	pop7	82	71.094	Danio_rerio
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSDNOG00000031207	POP7	64	95.714	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSDORG00000012512	Pop7	100	94.286	Dipodomys_ordii
MGP_CAROLIEiJ_G0027876	Pop7	79	43.966	FBgn0066304	Rpp20	66	43.966	Drosophila_melanogaster
MGP_CAROLIEiJ_G0027876	Pop7	100	91.429	ENSETEG00000007941	POP7	100	91.429	Echinops_telfairi
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSEASG00005016994	POP7	100	95.714	Equus_asinus_asinus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSECAG00000010383	POP7	100	95.714	Equus_caballus
MGP_CAROLIEiJ_G0027876	Pop7	83	70.339	ENSELUG00000023947	pop7	88	70.339	Esox_lucius
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSFCAG00000006849	POP7	100	95.000	Felis_catus
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSFDAG00000018839	POP7	100	96.429	Fukomys_damarensis
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSFHEG00000012595	pop7	82	72.093	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSGAFG00000017633	pop7	82	72.093	Gambusia_affinis
MGP_CAROLIEiJ_G0027876	Pop7	88	74.400	ENSGACG00000019931	pop7	79	74.400	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSGGOG00000016492	POP7	100	95.000	Gorilla_gorilla
MGP_CAROLIEiJ_G0027876	Pop7	87	70.968	ENSHBUG00000011987	pop7	90	70.968	Haplochromis_burtoni
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSHGLG00000018118	POP7	100	95.000	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSHGLG00100007908	POP7	100	95.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0027876	Pop7	94	72.180	ENSHCOG00000010137	pop7	84	72.180	Hippocampus_comes
MGP_CAROLIEiJ_G0027876	Pop7	87	73.387	ENSIPUG00000000411	pop7	79	73.387	Ictalurus_punctatus
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSSTOG00000030883	POP7	100	96.429	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSJJAG00000003989	Pop7	100	95.714	Jaculus_jaculus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSKMAG00000010696	pop7	82	72.093	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.308	ENSLBEG00000003483	pop7	89	72.308	Labrus_bergylta
MGP_CAROLIEiJ_G0027876	Pop7	86	73.387	ENSLBEG00000008621	pop7	77	73.387	Labrus_bergylta
MGP_CAROLIEiJ_G0027876	Pop7	100	72.603	ENSLACG00000010203	POP7	100	72.603	Latimeria_chalumnae
MGP_CAROLIEiJ_G0027876	Pop7	90	74.016	ENSLOCG00000017553	pop7	82	76.378	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0027876	Pop7	100	90.714	ENSLAFG00000030032	POP7	100	90.714	Loxodonta_africana
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMFAG00000027783	POP7	100	94.286	Macaca_fascicularis
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMMUG00000008581	POP7	100	94.286	Macaca_mulatta
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMNEG00000037495	POP7	100	94.286	Macaca_nemestrina
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMLEG00000027597	POP7	100	94.286	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0027876	Pop7	99	68.571	ENSMAMG00000007258	pop7	96	68.571	Mastacembelus_armatus
MGP_CAROLIEiJ_G0027876	Pop7	95	71.111	ENSMZEG00005022194	-	88	71.111	Maylandia_zebra
MGP_CAROLIEiJ_G0027876	Pop7	87	70.968	ENSMZEG00005005138	pop7	90	70.968	Maylandia_zebra
MGP_CAROLIEiJ_G0027876	Pop7	100	91.429	ENSMAUG00000015820	Pop7	100	91.429	Mesocricetus_auratus
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSMICG00000009398	POP7	100	96.429	Microcebus_murinus
MGP_CAROLIEiJ_G0027876	Pop7	100	97.143	ENSMOCG00000013694	Pop7	100	97.143	Microtus_ochrogaster
MGP_CAROLIEiJ_G0027876	Pop7	91	69.767	ENSMMOG00000014095	pop7	90	72.093	Mola_mola
MGP_CAROLIEiJ_G0027876	Pop7	100	86.620	ENSMODG00000023662	POP7	100	89.437	Monodelphis_domestica
MGP_CAROLIEiJ_G0027876	Pop7	87	74.194	ENSMALG00000011180	pop7	92	74.194	Monopterus_albus
MGP_CAROLIEiJ_G0027876	Pop7	100	100.000	ENSMUSG00000029715	Pop7	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	MGP_PahariEiJ_G0024462	Pop7	100	96.429	Mus_pahari
MGP_CAROLIEiJ_G0027876	Pop7	100	100.000	MGP_SPRETEiJ_G0028881	Pop7	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMPUG00000019765	POP7	100	94.286	Mustela_putorius_furo
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSMLUG00000010110	POP7	100	94.286	Myotis_lucifugus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSNGAG00000021630	Pop7	100	95.000	Nannospalax_galili
MGP_CAROLIEiJ_G0027876	Pop7	87	73.387	ENSNBRG00000006286	pop7	87	73.387	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSNLEG00000011939	POP7	100	95.000	Nomascus_leucogenys
MGP_CAROLIEiJ_G0027876	Pop7	54	94.667	ENSOPRG00000015185	POP7	100	94.667	Ochotona_princeps
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSODEG00000020363	POP7	100	96.429	Octodon_degus
MGP_CAROLIEiJ_G0027876	Pop7	100	82.857	ENSOANG00000001658	POP7	100	82.857	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSOCUG00000007818	POP7	100	95.714	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0027876	Pop7	89	74.803	ENSORLG00000003594	pop7	88	74.803	Oryzias_latipes
MGP_CAROLIEiJ_G0027876	Pop7	93	73.485	ENSORLG00020017530	pop7	78	73.485	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0027876	Pop7	91	74.419	ENSORLG00015015310	pop7	91	74.419	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0027876	Pop7	88	76.800	ENSOMEG00000003667	pop7	81	76.800	Oryzias_melastigma
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSOGAG00000009340	POP7	100	95.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPPAG00000015339	POP7	100	95.000	Pan_paniscus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPPRG00000018408	POP7	100	95.000	Panthera_pardus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPTIG00000005807	POP7	100	95.000	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPTRG00000047460	-	100	95.000	Pan_troglodytes
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPTRG00000019504	POP7	100	95.000	Pan_troglodytes
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSPANG00000006196	POP7	100	94.286	Papio_anubis
MGP_CAROLIEiJ_G0027876	Pop7	91	72.868	ENSPKIG00000019869	pop7	74	73.643	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0027876	Pop7	75	71.028	ENSPSIG00000000415	POP7	92	70.968	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0027876	Pop7	96	69.343	ENSPMGG00000011142	pop7	96	69.343	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0027876	Pop7	100	97.143	ENSPEMG00000011583	Pop7	100	97.143	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0027876	Pop7	100	86.620	ENSPCIG00000000517	POP7	72	88.028	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSPFOG00000019976	pop7	82	72.093	Poecilia_formosa
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSPLAG00000007700	pop7	82	72.093	Poecilia_latipinna
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSPMEG00000010673	pop7	82	72.093	Poecilia_mexicana
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSPREG00000015137	pop7	82	72.093	Poecilia_reticulata
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSPPYG00000017426	POP7	100	95.000	Pongo_abelii
MGP_CAROLIEiJ_G0027876	Pop7	100	92.143	ENSPCAG00000010445	POP7	100	92.143	Procavia_capensis
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSPCOG00000009302	POP7	100	96.429	Propithecus_coquereli
MGP_CAROLIEiJ_G0027876	Pop7	100	80.714	ENSPCOG00000018009	-	100	80.714	Propithecus_coquereli
MGP_CAROLIEiJ_G0027876	Pop7	87	70.968	ENSPNYG00000000975	pop7	90	70.968	Pundamilia_nyererei
MGP_CAROLIEiJ_G0027876	Pop7	87	71.774	ENSPNAG00000007206	pop7	86	73.387	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0027876	Pop7	100	98.571	ENSRNOG00000025310	Pop7	100	98.571	Rattus_norvegicus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSRBIG00000002671	POP7	100	95.000	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0027876	Pop7	100	95.714	ENSRROG00000028543	POP7	100	95.714	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0027876	Pop7	100	92.857	ENSSBOG00000005173	POP7	100	92.857	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0027876	Pop7	100	86.620	ENSSHAG00000001026	POP7	100	88.028	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0027876	Pop7	87	74.797	ENSSFOG00015007957	pop7	82	74.797	Scleropages_formosus
MGP_CAROLIEiJ_G0027876	Pop7	99	67.376	ENSSMAG00000015536	pop7	99	67.376	Scophthalmus_maximus
MGP_CAROLIEiJ_G0027876	Pop7	99	68.794	ENSSDUG00000022172	pop7	90	68.794	Seriola_dumerili
MGP_CAROLIEiJ_G0027876	Pop7	82	69.231	ENSSLDG00000019818	pop7	91	69.231	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0027876	Pop7	90	71.875	ENSSPAG00000000652	pop7	76	71.875	Stegastes_partitus
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSSSCG00000007672	POP7	100	96.429	Sus_scrofa
MGP_CAROLIEiJ_G0027876	Pop7	99	67.143	ENSTRUG00000024340	-	99	69.286	Takifugu_rubripes
MGP_CAROLIEiJ_G0027876	Pop7	93	68.939	ENSTRUG00000023845	pop7	84	71.212	Takifugu_rubripes
MGP_CAROLIEiJ_G0027876	Pop7	91	68.992	ENSTNIG00000001259	pop7	82	71.318	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0027876	Pop7	100	96.429	ENSTBEG00000001849	POP7	100	96.429	Tupaia_belangeri
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSTTRG00000011012	POP7	100	94.286	Tursiops_truncatus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSUAMG00000028076	POP7	100	94.286	Ursus_americanus
MGP_CAROLIEiJ_G0027876	Pop7	100	94.286	ENSUMAG00000010895	POP7	100	94.286	Ursus_maritimus
MGP_CAROLIEiJ_G0027876	Pop7	100	95.000	ENSVVUG00000023472	POP7	100	95.000	Vulpes_vulpes
MGP_CAROLIEiJ_G0027876	Pop7	91	70.543	ENSXCOG00000012016	pop7	81	70.543	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0027876	Pop7	91	72.093	ENSXMAG00000019746	pop7	82	72.093	Xiphophorus_maculatus