EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0028034 (Gene tree)
Gene ID
110293941
Gene Symbol
Polr1d
Alias
1110003G10Rik|16kDa|Rpo1-3|mRPA16
Full Name
uncharacterized LOC110293941
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
34471 bases
Position
chr5:140656076-140690546
Accession
110293941
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0072221RNA_pol_L_2PF13656.61.7e-2711
MGP_CAROLIEiJ_P0072221RNA_pol_LPF01193.241.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0072226-876--- (aa)--
MGP_CAROLIEiJ_T0072225-363--- (aa)--
MGP_CAROLIEiJ_T0072224-1346-MGP_CAROLIEiJ_P007222442 (aa)--
MGP_CAROLIEiJ_T0072223-1163-MGP_CAROLIEiJ_P007222333 (aa)-UPI00064548A9
MGP_CAROLIEiJ_T0072222-1131XM_021161841MGP_CAROLIEiJ_P0072222126 (aa)XP_021017500UPI000A314A3D
MGP_CAROLIEiJ_T0072221-1185-MGP_CAROLIEiJ_P0072221133 (aa)XP_021017499UPI000A3199D7
Gene Model
Click here to download MGP_CAROLIEiJ_G0028034's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028034's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0028034Polr1d7733.010MGP_CAROLIEiJ_G0027851Polr2j8533.010
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSG00000186184POLR1D10090.226Homo_sapiens
MGP_CAROLIEiJ_G0028034Polr1d7668.317ENSAPOG00000021882polr1d9469.000Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028034Polr1d9490.400ENSAMEG00000019095POLR1D10090.400Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028034Polr1d7572.000ENSACIG00000013328polr1d8772.000Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSAOCG00000018500polr1d9170.192Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028034Polr1d7869.231ENSAPEG00000009489polr1d9169.231Amphiprion_percula
MGP_CAROLIEiJ_G0028034Polr1d7866.346ENSATEG00000019322polr1d9464.762Anabas_testudineus
MGP_CAROLIEiJ_G0028034Polr1d8363.964ENSACAG00000015753POLR1D9663.964Anolis_carolinensis
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSANAG00000024486POLR1D10090.226Aotus_nancymaae
MGP_CAROLIEiJ_G0028034Polr1d7771.569ENSACLG00000023805polr1d9071.569Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028034Polr1d8067.925ENSAMXG00000036118polr1d9267.925Astyanax_mexicanus
MGP_CAROLIEiJ_G0028034Polr1d10087.218ENSBTAG00000033252-10087.218Bos_taurus
MGP_CAROLIEiJ_G0028034Polr1d10087.218ENSBTAG00000008642POLR1D10087.218Bos_taurus
MGP_CAROLIEiJ_G0028034Polr1d6239.024WBGene00010230rpac-195739.024Caenorhabditis_elegans
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSCJAG00000044669POLR1D10090.226Callithrix_jacchus
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSCAFG00000006755POLR1D10090.226Canis_familiaris
MGP_CAROLIEiJ_G0028034Polr1d10087.970ENSCHIG00000021910POLR1D10087.970Capra_hircus
MGP_CAROLIEiJ_G0028034Polr1d9386.290ENSTSYG00000026817-9386.290Carlito_syrichta
MGP_CAROLIEiJ_G0028034Polr1d9973.881ENSTSYG00000034852-9973.881Carlito_syrichta
MGP_CAROLIEiJ_G0028034Polr1d9751.938ENSCAPG00000006058-10051.938Cavia_aperea
MGP_CAROLIEiJ_G0028034Polr1d9752.713ENSCPOG00000030450-10052.713Cavia_porcellus
MGP_CAROLIEiJ_G0028034Polr1d10073.684ENSCCAG00000020191-10073.684Cebus_capucinus
MGP_CAROLIEiJ_G0028034Polr1d10088.722ENSCCAG00000021349-10088.722Cebus_capucinus
MGP_CAROLIEiJ_G0028034Polr1d10078.195ENSCATG00000022900-10078.195Cercocebus_atys
MGP_CAROLIEiJ_G0028034Polr1d10088.722ENSCATG00000030710-10088.722Cercocebus_atys
MGP_CAROLIEiJ_G0028034Polr1d9389.516ENSCLAG00000017623POLR1D10089.516Chinchilla_lanigera
MGP_CAROLIEiJ_G0028034Polr1d7374.227ENSCPBG00000004719POLR1D9674.227Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028034Polr1d10085.714ENSCANG00000037694-10085.714Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028034Polr1d10088.722ENSCANG00000028632-10088.722Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028034Polr1d10091.729ENSCGRG00001021251Polr1d10091.729Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028034Polr1d10091.729ENSCGRG00000011639Polr1d10091.729Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028034Polr1d8562.832ENSCSEG00000018268polr1d9762.832Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSCVAG00000018527polr1d9170.192Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028034Polr1d7965.714ENSDARG00000037570polr1d9465.714Danio_rerio
MGP_CAROLIEiJ_G0028034Polr1d10087.970ENSDNOG00000043676-10087.970Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028034Polr1d10085.821ENSDNOG00000046247-10085.821Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028034Polr1d10090.977ENSDORG00000029155Polr1d10090.977Dipodomys_ordii
MGP_CAROLIEiJ_G0028034Polr1d6445.882FBgn0086447l(2)37Cg8045.882Drosophila_melanogaster
MGP_CAROLIEiJ_G0028034Polr1d9383.871ENSETEG00000012797POLR1D10083.871Echinops_telfairi
MGP_CAROLIEiJ_G0028034Polr1d6568.966ENSEBUG00000011748polr1d6168.966Eptatretus_burgeri
MGP_CAROLIEiJ_G0028034Polr1d9789.922ENSEASG00005022487POLR1D10089.922Equus_asinus_asinus
MGP_CAROLIEiJ_G0028034Polr1d9389.516ENSEEUG00000013144POLR1D10089.516Erinaceus_europaeus
MGP_CAROLIEiJ_G0028034Polr1d7965.714ENSELUG00000005105rpac29265.714Esox_lucius
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSFCAG00000030162POLR1D10090.226Felis_catus
MGP_CAROLIEiJ_G0028034Polr1d7275.000ENSFALG00000011463POLR1D9575.000Ficedula_albicollis
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSFDAG00000004463POLR1D10089.474Fukomys_damarensis
MGP_CAROLIEiJ_G0028034Polr1d8072.897ENSFHEG00000015410polr1d9372.897Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028034Polr1d5365.714ENSGALG00000007470POLR1D6965.714Gallus_gallus
MGP_CAROLIEiJ_G0028034Polr1d7871.154ENSGAFG00000001693polr1d9171.154Gambusia_affinis
MGP_CAROLIEiJ_G0028034Polr1d8368.750ENSGACG00000018585polr1d9568.750Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028034Polr1d7876.923ENSGAGG00000008503POLR1D9176.923Gopherus_agassizii
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSGGOG00000004235POLR1D10090.226Gorilla_gorilla
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSHBUG00000002111polr1d9170.192Haplochromis_burtoni
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSHGLG00000003202POLR1D10089.474Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSHGLG00100009393POLR1D10089.474Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028034Polr1d7868.269ENSHCOG00000003258polr1d9168.269Hippocampus_comes
MGP_CAROLIEiJ_G0028034Polr1d7674.257ENSIPUG00000014810polr1d8874.257Ictalurus_punctatus
MGP_CAROLIEiJ_G0028034Polr1d10090.977ENSSTOG00000013877POLR1D10090.977Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028034Polr1d9570.635ENSJJAG00000021667-7570.635Jaculus_jaculus
MGP_CAROLIEiJ_G0028034Polr1d9786.466ENSJJAG00000022671-10089.167Jaculus_jaculus
MGP_CAROLIEiJ_G0028034Polr1d7767.961ENSKMAG00000015256polr1d9067.961Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028034Polr1d7869.231ENSLBEG00000015919polr1d9169.231Labrus_bergylta
MGP_CAROLIEiJ_G0028034Polr1d8565.487ENSLACG00000006810POLR1D9365.487Latimeria_chalumnae
MGP_CAROLIEiJ_G0028034Polr1d5475.676ENSLOCG00000014976polr1d10075.676Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028034Polr1d10084.962ENSLAFG00000032290POLR1D10084.962Loxodonta_africana
MGP_CAROLIEiJ_G0028034Polr1d9488.800ENSMFAG00000045264POLR1D9788.800Macaca_fascicularis
MGP_CAROLIEiJ_G0028034Polr1d10069.925ENSMMUG00000041570-10069.925Macaca_mulatta
MGP_CAROLIEiJ_G0028034Polr1d8788.793ENSMMUG00000020386POLR1D10088.793Macaca_mulatta
MGP_CAROLIEiJ_G0028034Polr1d10073.684ENSMNEG00000038120-10073.684Macaca_nemestrina
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSMNEG00000008630-10089.474Macaca_nemestrina
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSMLEG00000041048-10089.474Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028034Polr1d10078.947ENSMLEG00000032251-10078.947Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028034Polr1d7668.317ENSMAMG00000014834polr1d9468.317Mastacembelus_armatus
MGP_CAROLIEiJ_G0028034Polr1d7771.569ENSMZEG00005006638polr1d9071.569Maylandia_zebra
MGP_CAROLIEiJ_G0028034Polr1d6975.000ENSMGAG00000005322POLR1D8475.000Meleagris_gallopavo
MGP_CAROLIEiJ_G0028034Polr1d10091.729ENSMAUG00000001946Polr1d10091.729Mesocricetus_auratus
MGP_CAROLIEiJ_G0028034Polr1d9976.515ENSMICG00000007349-10076.515Microcebus_murinus
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSMICG00000016883-10089.474Microcebus_murinus
MGP_CAROLIEiJ_G0028034Polr1d9991.667ENSMOCG00000021288Polr1d9991.667Microtus_ochrogaster
MGP_CAROLIEiJ_G0028034Polr1d7869.231ENSMMOG00000009605polr1d9169.231Mola_mola
MGP_CAROLIEiJ_G0028034Polr1d8377.477ENSMODG00000023881POLR1D9777.477Monodelphis_domestica
MGP_CAROLIEiJ_G0028034Polr1d7965.714ENSMALG00000010652polr1d9265.714Monopterus_albus
MGP_CAROLIEiJ_G0028034Polr1d10099.248ENSMUSG00000029642Polr1d10099.248Mus_musculus
MGP_CAROLIEiJ_G0028034Polr1d10098.496MGP_PahariEiJ_G0024600Polr1d10098.496Mus_pahari
MGP_CAROLIEiJ_G0028034Polr1d10098.496MGP_SPRETEiJ_G0029032Polr1d10098.496Mus_spretus
MGP_CAROLIEiJ_G0028034Polr1d9978.788ENSMLUG00000004118-9978.788Myotis_lucifugus
MGP_CAROLIEiJ_G0028034Polr1d10087.970ENSMLUG00000027169-10087.970Myotis_lucifugus
MGP_CAROLIEiJ_G0028034Polr1d8789.655ENSNGAG00000006014Polr1d10089.655Nannospalax_galili
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSNBRG00000020327polr1d9170.192Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSNLEG00000000358POLR1D10090.226Nomascus_leucogenys
MGP_CAROLIEiJ_G0028034Polr1d10088.722ENSODEG00000005294-10088.722Octodon_degus
MGP_CAROLIEiJ_G0028034Polr1d10075.188ENSODEG00000014801-10075.188Octodon_degus
MGP_CAROLIEiJ_G0028034Polr1d7780.583ENSOANG00000008708-9580.583Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSOCUG00000015706POLR1D8290.226Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028034Polr1d7869.231ENSORLG00000010257polr1d9169.231Oryzias_latipes
MGP_CAROLIEiJ_G0028034Polr1d8266.972ENSORLG00020000533polr1d7466.972Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028034Polr1d8367.568ENSORLG00015013267polr1d7467.568Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028034Polr1d8567.257ENSOMEG00000014912polr1d7567.257Oryzias_melastigma
MGP_CAROLIEiJ_G0028034Polr1d10090.977ENSOGAG00000014601POLR1D10090.977Otolemur_garnettii
MGP_CAROLIEiJ_G0028034Polr1d9488.000ENSOARG00000017005POLR1D9688.000Ovis_aries
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSPPAG00000028138POLR1D10089.474Pan_paniscus
MGP_CAROLIEiJ_G0028034Polr1d9990.152ENSPPRG00000003381POLR1D9990.152Panthera_pardus
MGP_CAROLIEiJ_G0028034Polr1d9390.323ENSPTIG00000018137POLR1D9390.323Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSPTRG00000005734POLR1D10090.226Pan_troglodytes
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSPANG00000020259-10089.474Papio_anubis
MGP_CAROLIEiJ_G0028034Polr1d10078.947ENSPANG00000035051-10078.947Papio_anubis
MGP_CAROLIEiJ_G0028034Polr1d8662.281ENSPKIG00000021891polr1d9052.212Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028034Polr1d8771.795ENSPSIG00000011822POLR1D9171.795Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028034Polr1d8464.286ENSPMGG00000010359polr1d9764.286Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028034Polr1d9355.200ENSPMGG00000012998POLR1D9355.200Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028034Polr1d10087.970ENSPEMG00000006336-10087.970Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028034Polr1d8156.481ENSPMAG00000004228polr1d9156.481Petromyzon_marinus
MGP_CAROLIEiJ_G0028034Polr1d8377.477ENSPCIG00000001673POLR1D9777.477Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028034Polr1d7871.154ENSPFOG00000023343polr1d9172.152Poecilia_formosa
MGP_CAROLIEiJ_G0028034Polr1d7871.154ENSPLAG00000009675polr1d9171.154Poecilia_latipinna
MGP_CAROLIEiJ_G0028034Polr1d7871.154ENSPMEG00000004628polr1d9171.154Poecilia_mexicana
MGP_CAROLIEiJ_G0028034Polr1d7871.154ENSPREG00000022032polr1d9171.154Poecilia_reticulata
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSPCOG00000028175POLR1D10090.226Propithecus_coquereli
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSPNYG00000000107polr1d9170.192Pundamilia_nyererei
MGP_CAROLIEiJ_G0028034Polr1d7667.327ENSPNAG00000001512polr1d8766.346Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSRBIG00000036378-10089.474Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028034Polr1d10086.466ENSRBIG00000000336-10086.466Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028034Polr1d10085.714ENSRROG00000026751-10085.714Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028034Polr1d10089.474ENSRROG00000042232-10089.474Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028034Polr1d8944.538YNL113WRPC198444.538Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0028034Polr1d8686.842ENSSBOG00000030146-8486.842Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSSBOG00000028482-10090.226Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028034Polr1d8674.561ENSSHAG00000001190POLR1D8874.561Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028034Polr1d8270.642ENSSFOG00015011375polr1d9670.642Scleropages_formosus
MGP_CAROLIEiJ_G0028034Polr1d7868.269ENSSMAG00000011861polr1d9168.269Scophthalmus_maximus
MGP_CAROLIEiJ_G0028034Polr1d7866.346ENSSDUG00000011930polr1d9166.346Seriola_dumerili
MGP_CAROLIEiJ_G0028034Polr1d8660.870ENSSLDG00000023871polr1d9760.870Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSSARG00000007840POLR1D10090.226Sorex_araneus
MGP_CAROLIEiJ_G0028034Polr1d7972.381ENSSPUG00000005786POLR1D9569.369Sphenodon_punctatus
MGP_CAROLIEiJ_G0028034Polr1d7870.192ENSSPAG00000011764polr1d9170.192Stegastes_partitus
MGP_CAROLIEiJ_G0028034Polr1d10088.722ENSSSCG00000009310POLR1D10088.722Sus_scrofa
MGP_CAROLIEiJ_G0028034Polr1d7275.000ENSTGUG00000005450POLR1D10075.000Taeniopygia_guttata
MGP_CAROLIEiJ_G0028034Polr1d8361.261ENSTRUG00000019741polr1d9761.261Takifugu_rubripes
MGP_CAROLIEiJ_G0028034Polr1d9390.323ENSTBEG00000007006POLR1D10090.323Tupaia_belangeri
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSUAMG00000011413POLR1D10090.226Ursus_americanus
MGP_CAROLIEiJ_G0028034Polr1d9390.323ENSUMAG00000016968POLR1D9790.323Ursus_maritimus
MGP_CAROLIEiJ_G0028034Polr1d10090.226ENSVVUG00000009216POLR1D10090.226Vulpes_vulpes
MGP_CAROLIEiJ_G0028034Polr1d7473.469ENSXCOG00000011731polr1d7573.469Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028034Polr1d7473.469ENSXMAG00000017538polr1d7573.469Xiphophorus_maculatus

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