EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028162 (Gene tree)
Gene ID: 110296665
Gene Symbol: Rbm28
Alias: 2810480G15Rik
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 44553 bases
Position: chr6:23961311-24005863
Accession: 110296665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0072888	RRM_1	PF00076.22	8.5e-56	1	4
MGP_CAROLIEiJ_P0072888	RRM_1	PF00076.22	8.5e-56	2	4
MGP_CAROLIEiJ_P0072888	RRM_1	PF00076.22	8.5e-56	3	4
MGP_CAROLIEiJ_P0072888	RRM_1	PF00076.22	8.5e-56	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0072890	-	640	-	MGP_CAROLIEiJ_P0072890	133 (aa)	-	-
MGP_CAROLIEiJ_T0072891	-	953	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0072892	-	761	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0072893	-	496	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0072889	-	1939	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0072888	-	4666	-	MGP_CAROLIEiJ_P0072888	752 (aa)	XP_021021046	UPI000A31574E

Gene Model

Click here to download MGP_CAROLIEiJ_G0028162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.971	ENSG00000106344	RBM28	100	97.500	Homo_sapiens
MGP_CAROLIEiJ_G0028162	Rbm28	57	54.382	ENSAPOG00000015512	rbm28	100	51.746	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028162	Rbm28	100	82.692	ENSAMEG00000004776	RBM28	92	89.583	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028162	Rbm28	56	56.161	ENSACIG00000023153	rbm28	99	52.211	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028162	Rbm28	57	55.479	ENSAOCG00000000462	rbm28	100	51.239	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028162	Rbm28	57	55.251	ENSAPEG00000012996	rbm28	100	50.653	Amphiprion_percula
MGP_CAROLIEiJ_G0028162	Rbm28	58	50.959	ENSATEG00000001672	rbm28	100	48.666	Anabas_testudineus
MGP_CAROLIEiJ_G0028162	Rbm28	100	82.143	ENSANAG00000033922	RBM28	100	82.011	Aotus_nancymaae
MGP_CAROLIEiJ_G0028162	Rbm28	100	49.937	ENSACLG00000025024	rbm28	100	48.568	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028162	Rbm28	58	57.534	ENSAMXG00000000763	rbm28	99	58.676	Astyanax_mexicanus
MGP_CAROLIEiJ_G0028162	Rbm28	82	97.500	ENSBTAG00000017001	RBM28	100	97.500	Bos_taurus
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.817	ENSCJAG00000017731	RBM28	100	79.817	Callithrix_jacchus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.345	ENSCAFG00000001667	RBM28	100	80.345	Canis_familiaris
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.345	ENSCAFG00020021648	RBM28	100	80.345	Canis_lupus_dingo
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.045	ENSCHIG00000014146	RBM28	100	79.045	Capra_hircus
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.581	ENSTSYG00000002892	RBM28	100	92.500	Carlito_syrichta
MGP_CAROLIEiJ_G0028162	Rbm28	83	61.943	ENSCAPG00000013218	RBM28	100	61.943	Cavia_aperea
MGP_CAROLIEiJ_G0028162	Rbm28	100	81.950	ENSCPOG00000006253	RBM28	100	81.950	Cavia_porcellus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.263	ENSCCAG00000035105	RBM28	100	80.526	Cebus_capucinus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.341	ENSCATG00000040497	RBM28	100	95.000	Cercocebus_atys
MGP_CAROLIEiJ_G0028162	Rbm28	100	78.353	ENSCLAG00000003707	RBM28	100	78.353	Chinchilla_lanigera
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.526	ENSCSAG00000010161	RBM28	100	80.395	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028162	Rbm28	57	87.097	ENSCHOG00000001994	-	63	87.097	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028162	Rbm28	51	61.187	ENSCPBG00000018088	RBM28	81	61.239	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028162	Rbm28	90	80.608	ENSCANG00000038397	RBM28	100	97.500	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028162	Rbm28	66	89.379	ENSCGRG00001021278	Rbm28	100	84.783	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028162	Rbm28	100	85.976	ENSCGRG00000005098	Rbm28	100	85.976	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028162	Rbm28	100	50.708	ENSCSEG00000004212	rbm28	100	50.897	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028162	Rbm28	58	53.982	ENSCVAG00000010493	rbm28	99	49.806	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028162	Rbm28	88	56.858	ENSDARG00000025332	rbm28	100	47.907	Danio_rerio
MGP_CAROLIEiJ_G0028162	Rbm28	100	78.261	ENSDNOG00000001124	RBM28	100	79.447	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028162	Rbm28	65	82.696	ENSDORG00000004184	Rbm28	97	82.897	Dipodomys_ordii
MGP_CAROLIEiJ_G0028162	Rbm28	66	40.161	FBgn0260456	CG4806	68	39.394	Drosophila_melanogaster
MGP_CAROLIEiJ_G0028162	Rbm28	100	70.674	ENSETEG00000007130	RBM28	99	71.070	Echinops_telfairi
MGP_CAROLIEiJ_G0028162	Rbm28	99	40.000	ENSEBUG00000004419	rbm28	66	44.491	Eptatretus_burgeri
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.104	ENSEASG00005008528	RBM28	100	80.234	Equus_asinus_asinus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.000	ENSECAG00000007745	RBM28	100	80.130	Equus_caballus
MGP_CAROLIEiJ_G0028162	Rbm28	100	72.208	ENSEEUG00000002389	RBM28	100	71.948	Erinaceus_europaeus
MGP_CAROLIEiJ_G0028162	Rbm28	100	51.403	ENSELUG00000020602	rbm28	100	52.097	Esox_lucius
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.239	ENSFCAG00000000946	RBM28	100	97.500	Felis_catus
MGP_CAROLIEiJ_G0028162	Rbm28	100	82.626	ENSFDAG00000010169	RBM28	100	82.626	Fukomys_damarensis
MGP_CAROLIEiJ_G0028162	Rbm28	59	52.027	ENSGMOG00000007091	rbm28	66	50.947	Gadus_morhua
MGP_CAROLIEiJ_G0028162	Rbm28	59	55.134	ENSGAFG00000004802	rbm28	98	55.580	Gambusia_affinis
MGP_CAROLIEiJ_G0028162	Rbm28	58	54.839	ENSGACG00000012612	rbm28	100	49.801	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	52.116	ENSGAGG00000008873	RBM28	85	78.571	Gopherus_agassizii
MGP_CAROLIEiJ_G0028162	Rbm28	95	79.501	ENSGGOG00000004644	RBM28	97	80.055	Gorilla_gorilla
MGP_CAROLIEiJ_G0028162	Rbm28	90	50.980	ENSHBUG00000009611	rbm28	59	54.358	Haplochromis_burtoni
MGP_CAROLIEiJ_G0028162	Rbm28	100	81.939	ENSHGLG00000005409	RBM28	100	82.603	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028162	Rbm28	100	81.939	ENSHGLG00100016458	RBM28	100	82.603	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028162	Rbm28	83	47.396	ENSHCOG00000010597	rbm28	90	47.120	Hippocampus_comes
MGP_CAROLIEiJ_G0028162	Rbm28	56	49.052	ENSIPUG00000007103	rbm28	95	45.625	Ictalurus_punctatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	81.617	ENSSTOG00000002169	RBM28	100	82.399	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	75.229	ENSJJAG00000022400	Rbm28	100	74.770	Jaculus_jaculus
MGP_CAROLIEiJ_G0028162	Rbm28	59	54.911	ENSKMAG00000013348	rbm28	99	51.047	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028162	Rbm28	58	56.208	ENSLBEG00000012998	rbm28	100	49.872	Labrus_bergylta
MGP_CAROLIEiJ_G0028162	Rbm28	74	55.888	ENSLACG00000010485	-	100	56.667	Latimeria_chalumnae
MGP_CAROLIEiJ_G0028162	Rbm28	91	64.103	ENSLOCG00000015541	rbm28	79	62.887	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.392	ENSLAFG00000010717	RBM28	100	78.996	Loxodonta_africana
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.472	ENSMFAG00000031036	RBM28	100	95.000	Macaca_fascicularis
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.497	ENSMMUG00000007250	RBM28	100	95.000	Macaca_mulatta
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.339	ENSMNEG00000036970	RBM28	100	95.000	Macaca_nemestrina
MGP_CAROLIEiJ_G0028162	Rbm28	84	79.149	ENSMLEG00000037717	RBM28	100	78.936	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028162	Rbm28	100	50.900	ENSMAMG00000008525	rbm28	100	50.713	Mastacembelus_armatus
MGP_CAROLIEiJ_G0028162	Rbm28	93	49.189	ENSMZEG00005019625	rbm28	68	53.878	Maylandia_zebra
MGP_CAROLIEiJ_G0028162	Rbm28	100	82.905	ENSMAUG00000002263	Rbm28	100	82.519	Mesocricetus_auratus
MGP_CAROLIEiJ_G0028162	Rbm28	93	76.902	ENSMICG00000000107	RBM28	100	78.008	Microcebus_murinus
MGP_CAROLIEiJ_G0028162	Rbm28	100	87.649	ENSMOCG00000014615	Rbm28	100	87.782	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028162	Rbm28	58	52.982	ENSMMOG00000008600	rbm28	95	52.278	Mola_mola
MGP_CAROLIEiJ_G0028162	Rbm28	100	69.241	ENSMODG00000015151	RBM28	100	70.458	Monodelphis_domestica
MGP_CAROLIEiJ_G0028162	Rbm28	58	53.499	ENSMALG00000006419	rbm28	100	48.416	Monopterus_albus
MGP_CAROLIEiJ_G0028162	Rbm28	100	97.207	ENSMUSG00000029701	Rbm28	100	97.207	Mus_musculus
MGP_CAROLIEiJ_G0028162	Rbm28	100	94.688	MGP_PahariEiJ_G0021920	Rbm28	100	94.688	Mus_pahari
MGP_CAROLIEiJ_G0028162	Rbm28	100	97.473	MGP_SPRETEiJ_G0029162	Rbm28	100	97.473	Mus_spretus
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.342	ENSMPUG00000006511	RBM28	100	79.342	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.581	ENSMLUG00000002186	RBM28	100	79.948	Myotis_lucifugus
MGP_CAROLIEiJ_G0028162	Rbm28	100	82.095	ENSNGAG00000006480	-	100	82.361	Nannospalax_galili
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.470	ENSNGAG00000017946	-	100	79.470	Nannospalax_galili
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.026	ENSNLEG00000012307	RBM28	100	97.500	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028162	Rbm28	81	80.864	ENSMEUG00000009611	RBM28	88	80.864	Notamacropus_eugenii
MGP_CAROLIEiJ_G0028162	Rbm28	90	73.129	ENSOPRG00000015140	RBM28	90	73.025	Ochotona_princeps
MGP_CAROLIEiJ_G0028162	Rbm28	100	77.984	ENSODEG00000003213	-	100	78.382	Octodon_degus
MGP_CAROLIEiJ_G0028162	Rbm28	81	82.160	ENSODEG00000013217	-	84	86.181	Octodon_degus
MGP_CAROLIEiJ_G0028162	Rbm28	59	54.248	ENSONIG00000014924	rbm28	62	54.219	Oreochromis_niloticus
MGP_CAROLIEiJ_G0028162	Rbm28	100	63.885	ENSOANG00000000815	-	100	64.752	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028162	Rbm28	100	78.906	ENSOCUG00000003009	RBM28	100	79.167	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028162	Rbm28	99	50.317	ENSORLG00000009636	rbm28	99	51.571	Oryzias_latipes
MGP_CAROLIEiJ_G0028162	Rbm28	58	55.079	ENSORLG00020002123	rbm28	99	51.444	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028162	Rbm28	88	60.766	ENSORLG00015015030	rbm28	99	59.420	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028162	Rbm28	58	56.703	ENSOMEG00000007801	rbm28	100	52.196	Oryzias_melastigma
MGP_CAROLIEiJ_G0028162	Rbm28	94	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0028162	Rbm28	100	78.704	ENSOARG00000002547	RBM28	100	78.439	Ovis_aries
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.497	ENSPPAG00000041730	RBM28	100	97.500	Pan_paniscus
MGP_CAROLIEiJ_G0028162	Rbm28	82	97.500	ENSPPRG00000004420	RBM28	100	97.500	Panthera_pardus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.106	ENSPTIG00000008550	RBM28	100	97.500	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.759	ENSPTRG00000019659	RBM28	100	97.500	Pan_troglodytes
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.497	ENSPANG00000022295	RBM28	100	95.000	Papio_anubis
MGP_CAROLIEiJ_G0028162	Rbm28	99	51.244	ENSPKIG00000023453	rbm28	99	51.741	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028162	Rbm28	60	51.893	ENSPMGG00000012840	rbm28	64	51.173	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	84.861	ENSPEMG00000020673	Rbm28	100	84.993	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028162	Rbm28	100	69.261	ENSPCIG00000012810	RBM28	100	70.619	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028162	Rbm28	59	56.250	ENSPFOG00000018209	rbm28	100	51.105	Poecilia_formosa
MGP_CAROLIEiJ_G0028162	Rbm28	58	55.405	ENSPLAG00000016078	rbm28	96	50.458	Poecilia_latipinna
MGP_CAROLIEiJ_G0028162	Rbm28	59	56.125	ENSPMEG00000004292	rbm28	100	50.455	Poecilia_mexicana
MGP_CAROLIEiJ_G0028162	Rbm28	57	55.275	ENSPREG00000014287	rbm28	98	50.132	Poecilia_reticulata
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.921	ENSPPYG00000017975	RBM28	100	81.447	Pongo_abelii
MGP_CAROLIEiJ_G0028162	Rbm28	74	74.930	ENSPCAG00000008223	RBM28	83	74.792	Procavia_capensis
MGP_CAROLIEiJ_G0028162	Rbm28	82	97.500	ENSPCOG00000016797	RBM28	100	97.500	Propithecus_coquereli
MGP_CAROLIEiJ_G0028162	Rbm28	78	89.302	ENSPVAG00000005443	RBM28	77	89.302	Pteropus_vampyrus
MGP_CAROLIEiJ_G0028162	Rbm28	100	49.685	ENSPNYG00000014003	rbm28	63	53.926	Pundamilia_nyererei
MGP_CAROLIEiJ_G0028162	Rbm28	100	89.404	ENSRNOG00000005468	Rbm28	100	89.139	Rattus_norvegicus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.523	ENSRBIG00000033990	RBM28	100	97.500	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.366	ENSRROG00000040747	RBM28	100	97.500	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028162	Rbm28	91	73.890	ENSSBOG00000012308	RBM28	100	72.324	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028162	Rbm28	96	66.713	ENSSHAG00000017017	RBM28	99	64.810	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028162	Rbm28	100	52.163	ENSSFOG00015001231	rbm28	66	55.081	Scleropages_formosus
MGP_CAROLIEiJ_G0028162	Rbm28	59	52.360	ENSSMAG00000003885	rbm28	96	51.163	Scophthalmus_maximus
MGP_CAROLIEiJ_G0028162	Rbm28	59	56.360	ENSSLDG00000020099	rbm28	63	54.878	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028162	Rbm28	76	83.929	ENSSARG00000008303	RBM28	80	83.544	Sorex_araneus
MGP_CAROLIEiJ_G0028162	Rbm28	67	70.588	ENSSPUG00000000838	RBM28	91	70.588	Sphenodon_punctatus
MGP_CAROLIEiJ_G0028162	Rbm28	58	52.980	ENSSPAG00000023305	rbm28	100	49.589	Stegastes_partitus
MGP_CAROLIEiJ_G0028162	Rbm28	100	79.657	ENSSSCG00000031847	RBM28	100	80.079	Sus_scrofa
MGP_CAROLIEiJ_G0028162	Rbm28	59	53.478	ENSTRUG00000013311	rbm28	99	48.241	Takifugu_rubripes
MGP_CAROLIEiJ_G0028162	Rbm28	99	50.388	ENSTNIG00000017962	rbm28	99	49.614	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028162	Rbm28	86	86.310	ENSTBEG00000012749	RBM28	86	86.310	Tupaia_belangeri
MGP_CAROLIEiJ_G0028162	Rbm28	100	77.195	ENSTTRG00000013647	RBM28	100	77.195	Tursiops_truncatus
MGP_CAROLIEiJ_G0028162	Rbm28	100	74.079	ENSUAMG00000006949	RBM28	100	74.079	Ursus_americanus
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.449	ENSUMAG00000005997	RBM28	100	80.053	Ursus_maritimus
MGP_CAROLIEiJ_G0028162	Rbm28	88	72.534	ENSVPAG00000008304	RBM28	87	72.534	Vicugna_pacos
MGP_CAROLIEiJ_G0028162	Rbm28	100	80.080	ENSVVUG00000007270	RBM28	100	80.080	Vulpes_vulpes
MGP_CAROLIEiJ_G0028162	Rbm28	99	54.337	ENSXETG00000009271	rbm28	99	54.499	Xenopus_tropicalis
MGP_CAROLIEiJ_G0028162	Rbm28	59	53.515	ENSXCOG00000020357	rbm28	97	52.146	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028162	Rbm28	58	54.831	ENSXMAG00000004415	rbm28	100	51.114	Xiphophorus_maculatus