EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0028183 (Gene tree)
Gene ID
110296226
Gene Symbol
Zc3hc1
Alias
1110054L24Rik|HSPC216|Nipa
Full Name
zinc finger C3HC-type containing 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
22274 bases
Position
chr6:25230264-25252537
Accession
110296226
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0073033zf-C3HCPF07967.131.7e-3611
MGP_CAROLIEiJ_P0073032zf-C3HCPF07967.134.3e-3611
MGP_CAROLIEiJ_P0073030zf-C3HCPF07967.134.5e-3611
MGP_CAROLIEiJ_P0073029zf-C3HCPF07967.135e-3611
MGP_CAROLIEiJ_P0073032Rsm1PF08600.101.4e-1612
MGP_CAROLIEiJ_P0073032Rsm1PF08600.101.4e-1622
MGP_CAROLIEiJ_P0073029Rsm1PF08600.101.5e-1612
MGP_CAROLIEiJ_P0073029Rsm1PF08600.101.5e-1622
MGP_CAROLIEiJ_P0073033Rsm1PF08600.101.2e-1512
MGP_CAROLIEiJ_P0073033Rsm1PF08600.101.2e-1522
MGP_CAROLIEiJ_P0073030Rsm1PF08600.101.5e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0073039-362--- (aa)--
MGP_CAROLIEiJ_T0073038-2651--- (aa)--
MGP_CAROLIEiJ_T0073029-1823XM_021164814MGP_CAROLIEiJ_P0073029500 (aa)XP_021020473UPI000A317F82
MGP_CAROLIEiJ_T0073035-784-MGP_CAROLIEiJ_P007303549 (aa)--
MGP_CAROLIEiJ_T0073034-447--- (aa)--
MGP_CAROLIEiJ_T0073037-556-MGP_CAROLIEiJ_P007303744 (aa)--
MGP_CAROLIEiJ_T0073036-468--- (aa)--
MGP_CAROLIEiJ_T0073031-843--- (aa)--
MGP_CAROLIEiJ_T0073030-1672-MGP_CAROLIEiJ_P0073030458 (aa)--
MGP_CAROLIEiJ_T0073033-1501-MGP_CAROLIEiJ_P0073033429 (aa)--
MGP_CAROLIEiJ_T0073032-1864-MGP_CAROLIEiJ_P0073032480 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0028183's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028183's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0028183Zc3hc19985.743ENSG00000091732ZC3HC19985.743Homo_sapiens
MGP_CAROLIEiJ_G0028183Zc3hc19545.509ENSAPOG00000009078zc3hc19642.485Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028183Zc3hc110085.317ENSAMEG00000005425ZC3HC110085.317Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028183Zc3hc19545.260ENSACIG00000019513zc3hc19641.800Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028183Zc3hc19545.808ENSAOCG00000024310zc3hc19642.886Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028183Zc3hc19545.808ENSAPEG00000004907zc3hc19642.886Amphiprion_percula
MGP_CAROLIEiJ_G0028183Zc3hc18446.572ENSATEG00000016898zc3hc18546.353Anabas_testudineus
MGP_CAROLIEiJ_G0028183Zc3hc18859.910ENSAPLG00000003832ZC3HC19959.910Anas_platyrhynchos
MGP_CAROLIEiJ_G0028183Zc3hc19560.000ENSACAG00000001638ZC3HC19560.000Anolis_carolinensis
MGP_CAROLIEiJ_G0028183Zc3hc110084.223ENSANAG00000022213ZC3HC19985.854Aotus_nancymaae
MGP_CAROLIEiJ_G0028183Zc3hc18746.732ENSACLG00000025033zc3hc19942.979Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028183Zc3hc19543.991ENSAMXG00000036792zc3hc19743.154Astyanax_mexicanus
MGP_CAROLIEiJ_G0028183Zc3hc110084.861ENSBTAG00000011247ZC3HC110084.861Bos_taurus
MGP_CAROLIEiJ_G0028183Zc3hc110084.462ENSCJAG00000010536ZC3HC19985.854Callithrix_jacchus
MGP_CAROLIEiJ_G0028183Zc3hc110086.733ENSCAFG00000001499-9986.733Canis_familiaris
MGP_CAROLIEiJ_G0028183Zc3hc110087.649ENSCAFG00000031850-10087.649Canis_familiaris
MGP_CAROLIEiJ_G0028183Zc3hc110087.251ENSCAFG00000029401-9987.251Canis_familiaris
MGP_CAROLIEiJ_G0028183Zc3hc110087.251ENSCAFG00000028735-10087.251Canis_familiaris
MGP_CAROLIEiJ_G0028183Zc3hc110085.714ENSCAFG00020023333-10085.714Canis_lupus_dingo
MGP_CAROLIEiJ_G0028183Zc3hc110087.450ENSCAFG00020006829-10087.450Canis_lupus_dingo
MGP_CAROLIEiJ_G0028183Zc3hc110077.888ENSCHIG00000014103ZC3HC110077.888Capra_hircus
MGP_CAROLIEiJ_G0028183Zc3hc110082.470ENSTSYG00000002843ZC3HC19982.932Carlito_syrichta
MGP_CAROLIEiJ_G0028183Zc3hc18964.218ENSCAPG00000016300ZC3HC19277.515Cavia_aperea
MGP_CAROLIEiJ_G0028183Zc3hc110081.671ENSCPOG00000014034ZC3HC110081.671Cavia_porcellus
MGP_CAROLIEiJ_G0028183Zc3hc110067.729ENSCCAG00000020384ZC3HC110088.106Cebus_capucinus
MGP_CAROLIEiJ_G0028183Zc3hc110085.857ENSCATG00000023130ZC3HC110085.857Cercocebus_atys
MGP_CAROLIEiJ_G0028183Zc3hc110063.537ENSCLAG00000008260ZC3HC110063.181Chinchilla_lanigera
MGP_CAROLIEiJ_G0028183Zc3hc17386.612ENSCSAG00000009881ZC3HC19786.612Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028183Zc3hc18985.746ENSCHOG00000011846ZC3HC19985.746Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028183Zc3hc19665.844ENSCPBG00000017519ZC3HC19765.844Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028183Zc3hc110085.657ENSCANG00000029091ZC3HC110085.657Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028183Zc3hc110090.229ENSCGRG00001018805Zc3hc110090.229Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028183Zc3hc110089.022ENSCGRG00000017114Zc3hc110089.022Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028183Zc3hc19642.400ENSCSEG00000009284zc3hc19542.000Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028183Zc3hc19346.177ENSCVAG00000011566zc3hc19543.117Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028183Zc3hc19548.615ENSDARG00000062651zc3hc19646.640Danio_rerio
MGP_CAROLIEiJ_G0028183Zc3hc110083.865ENSDNOG00000045016ZC3HC110083.865Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028183Zc3hc110076.693ENSDORG00000008697Zc3hc110076.693Dipodomys_ordii
MGP_CAROLIEiJ_G0028183Zc3hc19087.389ENSEASG00005008789ZC3HC19787.389Equus_asinus_asinus
MGP_CAROLIEiJ_G0028183Zc3hc110085.089ENSECAG00000017886ZC3HC110085.089Equus_caballus
MGP_CAROLIEiJ_G0028183Zc3hc19178.395ENSEEUG00000003123ZC3HC18478.395Erinaceus_europaeus
MGP_CAROLIEiJ_G0028183Zc3hc19348.594ENSELUG00000023168zc3hc19843.275Esox_lucius
MGP_CAROLIEiJ_G0028183Zc3hc110084.861ENSFCAG00000010429ZC3HC110084.861Felis_catus
MGP_CAROLIEiJ_G0028183Zc3hc19057.479ENSFALG00000005006ZC3HC110057.479Ficedula_albicollis
MGP_CAROLIEiJ_G0028183Zc3hc110082.470ENSFDAG00000019897ZC3HC110082.470Fukomys_damarensis
MGP_CAROLIEiJ_G0028183Zc3hc19545.619ENSFHEG00000020149zc3hc19941.748Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028183Zc3hc19441.529ENSGMOG00000002914zc3hc19540.122Gadus_morhua
MGP_CAROLIEiJ_G0028183Zc3hc19760.612ENSGALG00000008003ZC3HC19860.905Gallus_gallus
MGP_CAROLIEiJ_G0028183Zc3hc19545.619ENSGAFG00000016095zc3hc19643.863Gambusia_affinis
MGP_CAROLIEiJ_G0028183Zc3hc19443.852ENSGACG00000019706zc3hc19543.673Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028183Zc3hc17765.473ENSGAGG00000016106ZC3HC110067.008Gopherus_agassizii
MGP_CAROLIEiJ_G0028183Zc3hc19985.542ENSGGOG00000015504ZC3HC19985.542Gorilla_gorilla
MGP_CAROLIEiJ_G0028183Zc3hc19345.732ENSHBUG00000008347zc3hc19542.480Haplochromis_burtoni
MGP_CAROLIEiJ_G0028183Zc3hc110083.267ENSHGLG00000005085ZC3HC110083.267Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028183Zc3hc110083.068ENSHGLG00100011395ZC3HC110083.068Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028183Zc3hc19642.339ENSHCOG00000014309zc3hc19643.662Hippocampus_comes
MGP_CAROLIEiJ_G0028183Zc3hc110085.259ENSSTOG00000023599-10085.259Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028183Zc3hc19346.933ENSKMAG00000015315zc3hc18943.089Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028183Zc3hc19445.748ENSLBEG00000017325zc3hc19643.849Labrus_bergylta
MGP_CAROLIEiJ_G0028183Zc3hc18254.501ENSLACG00000013032ZC3HC19754.501Latimeria_chalumnae
MGP_CAROLIEiJ_G0028183Zc3hc19953.913ENSLOCG00000015963zc3hc19951.076Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028183Zc3hc110082.213ENSLAFG00000001292ZC3HC110082.213Loxodonta_africana
MGP_CAROLIEiJ_G0028183Zc3hc110085.857ENSMFAG00000030176ZC3HC110085.857Macaca_fascicularis
MGP_CAROLIEiJ_G0028183Zc3hc110085.383ENSMMUG00000006155ZC3HC19986.813Macaca_mulatta
MGP_CAROLIEiJ_G0028183Zc3hc110086.056ENSMNEG00000011833ZC3HC19888.462Macaca_nemestrina
MGP_CAROLIEiJ_G0028183Zc3hc110086.056ENSMLEG00000027328ZC3HC110086.056Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028183Zc3hc19546.291ENSMAMG00000010691zc3hc19643.513Mastacembelus_armatus
MGP_CAROLIEiJ_G0028183Zc3hc19345.427ENSMZEG00005007142zc3hc19542.276Maylandia_zebra
MGP_CAROLIEiJ_G0028183Zc3hc19660.772ENSMGAG00000002977ZC3HC19861.179Meleagris_gallopavo
MGP_CAROLIEiJ_G0028183Zc3hc18283.575ENSMAUG00000017032Zc3hc19283.575Mesocricetus_auratus
MGP_CAROLIEiJ_G0028183Zc3hc110084.661ENSMICG00000009167ZC3HC110084.661Microcebus_murinus
MGP_CAROLIEiJ_G0028183Zc3hc110088.224ENSMOCG00000015239Zc3hc110088.224Microtus_ochrogaster
MGP_CAROLIEiJ_G0028183Zc3hc17850.833ENSMMOG00000002204zc3hc19941.704Mola_mola
MGP_CAROLIEiJ_G0028183Zc3hc110061.404ENSMODG00000014630ZC3HC110061.154Monodelphis_domestica
MGP_CAROLIEiJ_G0028183Zc3hc19542.886ENSMALG00000014447zc3hc19642.490Monopterus_albus
MGP_CAROLIEiJ_G0028183Zc3hc110096.732ENSMUSG00000039130Zc3hc110096.732Mus_musculus
MGP_CAROLIEiJ_G0028183Zc3hc110087.582MGP_PahariEiJ_G0021941Zc3hc110087.582Mus_pahari
MGP_CAROLIEiJ_G0028183Zc3hc110096.732MGP_SPRETEiJ_G0029183Zc3hc110096.732Mus_spretus
MGP_CAROLIEiJ_G0028183Zc3hc110084.647ENSMPUG00000005297ZC3HC19585.177Mustela_putorius_furo
MGP_CAROLIEiJ_G0028183Zc3hc16682.445ENSMLUG00000029228-9979.412Myotis_lucifugus
MGP_CAROLIEiJ_G0028183Zc3hc110083.762ENSMLUG00000000063-10083.762Myotis_lucifugus
MGP_CAROLIEiJ_G0028183Zc3hc110085.857ENSNGAG00000019014Zc3hc110085.857Nannospalax_galili
MGP_CAROLIEiJ_G0028183Zc3hc19345.732ENSNBRG00000004577zc3hc19542.363Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028183Zc3hc19984.739ENSNLEG00000012698ZC3HC19984.739Nomascus_leucogenys
MGP_CAROLIEiJ_G0028183Zc3hc110074.118ENSMEUG00000011023ZC3HC110073.904Notamacropus_eugenii
MGP_CAROLIEiJ_G0028183Zc3hc17677.132ENSOPRG00000007867-6877.132Ochotona_princeps
MGP_CAROLIEiJ_G0028183Zc3hc110080.279ENSODEG00000014604ZC3HC110079.814Octodon_degus
MGP_CAROLIEiJ_G0028183Zc3hc19443.089ENSONIG00000011644zc3hc19542.683Oreochromis_niloticus
MGP_CAROLIEiJ_G0028183Zc3hc19067.026ENSOANG00000011460ZC3HC110067.026Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028183Zc3hc110080.792ENSOCUG00000017137ZC3HC110080.792Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028183Zc3hc19248.297ENSORLG00000014409zc3hc19543.813Oryzias_latipes
MGP_CAROLIEiJ_G0028183Zc3hc19447.432ENSORLG00020015874zc3hc19543.611Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028183Zc3hc19148.125ENSORLG00015014641zc3hc19543.408Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028183Zc3hc19543.763ENSOMEG00000000215zc3hc19544.130Oryzias_melastigma
MGP_CAROLIEiJ_G0028183Zc3hc19544.398ENSOMEG00000020604zc3hc19544.764Oryzias_melastigma
MGP_CAROLIEiJ_G0028183Zc3hc110079.283ENSOGAG00000026193ZC3HC110079.283Otolemur_garnettii
MGP_CAROLIEiJ_G0028183Zc3hc110084.356ENSOARG00000004907ZC3HC19984.356Ovis_aries
MGP_CAROLIEiJ_G0028183Zc3hc19985.743ENSPPAG00000043172ZC3HC19985.743Pan_paniscus
MGP_CAROLIEiJ_G0028183Zc3hc19985.294ENSPPRG00000001004ZC3HC19984.538Panthera_pardus
MGP_CAROLIEiJ_G0028183Zc3hc110084.661ENSPTIG00000007823ZC3HC110084.661Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028183Zc3hc19985.341ENSPTRG00000019685ZC3HC19985.341Pan_troglodytes
MGP_CAROLIEiJ_G0028183Zc3hc110085.383ENSPANG00000014229ZC3HC110085.383Papio_anubis
MGP_CAROLIEiJ_G0028183Zc3hc19549.686ENSPKIG00000007172zc3hc19647.423Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028183Zc3hc19262.752ENSPSIG00000016646ZC3HC19758.182Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028183Zc3hc19050.207ENSPMGG00000003548zc3hc19642.925Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028183Zc3hc110090.265ENSPEMG00000000514Zc3hc110088.623Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028183Zc3hc19971.657ENSPCIG00000020619ZC3HC110074.807Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028183Zc3hc19545.482ENSPFOG00000003466zc3hc19643.260Poecilia_formosa
MGP_CAROLIEiJ_G0028183Zc3hc19545.181ENSPLAG00000022211zc3hc19642.600Poecilia_latipinna
MGP_CAROLIEiJ_G0028183Zc3hc19545.482ENSPMEG00000001458zc3hc19643.260Poecilia_mexicana
MGP_CAROLIEiJ_G0028183Zc3hc19545.482ENSPREG00000004004zc3hc19643.058Poecilia_reticulata
MGP_CAROLIEiJ_G0028183Zc3hc19977.600ENSPPYG00000017998ZC3HC19977.600Pongo_abelii
MGP_CAROLIEiJ_G0028183Zc3hc19280.435ENSPCAG00000001182ZC3HC110080.435Procavia_capensis
MGP_CAROLIEiJ_G0028183Zc3hc110085.259ENSPCOG00000017354ZC3HC110085.259Propithecus_coquereli
MGP_CAROLIEiJ_G0028183Zc3hc110080.040ENSPVAG00000003195ZC3HC110080.439Pteropus_vampyrus
MGP_CAROLIEiJ_G0028183Zc3hc19345.427ENSPNYG00000020692zc3hc19542.276Pundamilia_nyererei
MGP_CAROLIEiJ_G0028183Zc3hc19344.912ENSPNAG00000020746zc3hc19544.304Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028183Zc3hc110092.032ENSRNOG00000010154Zc3hc110092.032Rattus_norvegicus
MGP_CAROLIEiJ_G0028183Zc3hc19087.196ENSRBIG00000029409ZC3HC110087.196Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028183Zc3hc110085.657ENSRROG00000041831ZC3HC110085.657Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028183Zc3hc19376.316ENSSBOG00000032787ZC3HC19986.829Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028183Zc3hc19274.624ENSSHAG00000002529ZC3HC110074.624Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028183Zc3hc19648.889ENSSFOG00015003667zc3hc19248.676Scleropages_formosus
MGP_CAROLIEiJ_G0028183Zc3hc19541.434ENSSMAG00000000647zc3hc18641.551Scophthalmus_maximus
MGP_CAROLIEiJ_G0028183Zc3hc19546.269ENSSDUG00000004241zc3hc19443.487Seriola_dumerili
MGP_CAROLIEiJ_G0028183Zc3hc19545.970ENSSLDG00000025056zc3hc19443.287Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028183Zc3hc19974.651ENSSARG00000012013ZC3HC19974.651Sorex_araneus
MGP_CAROLIEiJ_G0028183Zc3hc19056.948ENSSPUG00000000778ZC3HC18662.944Sphenodon_punctatus
MGP_CAROLIEiJ_G0028183Zc3hc19545.833ENSSPAG00000020041zc3hc19643.713Stegastes_partitus
MGP_CAROLIEiJ_G0028183Zc3hc110083.865ENSSSCG00000016565ZC3HC110084.833Sus_scrofa
MGP_CAROLIEiJ_G0028183Zc3hc19047.910ENSTRUG00000020077zc3hc19542.653Takifugu_rubripes
MGP_CAROLIEiJ_G0028183Zc3hc19347.059ENSTNIG00000007585zc3hc19942.236Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028183Zc3hc19975.301ENSTBEG00000005216ZC3HC19975.301Tupaia_belangeri
MGP_CAROLIEiJ_G0028183Zc3hc19585.417ENSTTRG00000008458ZC3HC110085.417Tursiops_truncatus
MGP_CAROLIEiJ_G0028183Zc3hc110085.857ENSUAMG00000020249ZC3HC110085.857Ursus_americanus
MGP_CAROLIEiJ_G0028183Zc3hc110085.259ENSUMAG00000009268ZC3HC110085.259Ursus_maritimus
MGP_CAROLIEiJ_G0028183Zc3hc19086.000ENSVPAG00000010846ZC3HC17786.000Vicugna_pacos
MGP_CAROLIEiJ_G0028183Zc3hc110086.307ENSVVUG00000012386ZC3HC110086.307Vulpes_vulpes
MGP_CAROLIEiJ_G0028183Zc3hc19552.146ENSXETG00000033900zc3hc19652.146Xenopus_tropicalis
MGP_CAROLIEiJ_G0028183Zc3hc19643.117ENSXCOG00000013570zc3hc19644.072Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028183Zc3hc18744.789ENSXMAG00000010979zc3hc19544.371Xiphophorus_maculatus

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