EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0028217 (Gene tree)
Gene ID
110295969
Gene Symbol
Cnot4
Alias
Not4|Not4h|Not4hp
Full Name
CCR4-NOT transcription complex subunit 4
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
111113 bases
Position
chr6:29803251-29914363
Accession
110295969
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0073236RRM_1PF00076.221.4e-0511
MGP_CAROLIEiJ_P0073235RRM_1PF00076.221.4e-0511
MGP_CAROLIEiJ_P0073232RRM_1PF00076.221.7e-0511
MGP_CAROLIEiJ_P0073233RRM_1PF00076.221.8e-0511
MGP_CAROLIEiJ_P0073234RRM_1PF00076.222.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0073233-3283XM_021164399MGP_CAROLIEiJ_P0073233644 (aa)XP_021020058UPI000A315E3D
MGP_CAROLIEiJ_T0073232-3206-MGP_CAROLIEiJ_P0073232641 (aa)-UPI000A31738D
MGP_CAROLIEiJ_T0073231-2822--- (aa)--
MGP_CAROLIEiJ_T0073237-3780--- (aa)--
MGP_CAROLIEiJ_T0073236-3303-MGP_CAROLIEiJ_P0073236574 (aa)XP_021020061UPI000A317264
MGP_CAROLIEiJ_T0073235-3346-MGP_CAROLIEiJ_P0073235577 (aa)XP_021020060UPI000A315E57
MGP_CAROLIEiJ_T0073234-3477XM_021164397MGP_CAROLIEiJ_P0073234712 (aa)XP_021020056UPI000A3183C0
MGP_CAROLIEiJ_T0073238-561--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0028217's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028217's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSG00000080802CNOT410098.614Homo_sapiens
MGP_CAROLIEiJ_G0028217Cnot49390.566ENSAPOG00000016272cnot4a8290.566Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028217Cnot49797.110ENSAMEG00000012081CNOT49199.535Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028217Cnot410062.727ENSACIG00000003011cnot4a10059.433Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSAOCG00000010792cnot4a9190.566Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSAPEG00000004680cnot4a9190.566Amphiprion_percula
MGP_CAROLIEiJ_G0028217Cnot49990.189ENSATEG00000017580cnot4a9190.189Anabas_testudineus
MGP_CAROLIEiJ_G0028217Cnot410087.435ENSAPLG00000016441CNOT410087.435Anas_platyrhynchos
MGP_CAROLIEiJ_G0028217Cnot410087.565ENSACAG00000011154CNOT410087.565Anolis_carolinensis
MGP_CAROLIEiJ_G0028217Cnot410098.780ENSANAG00000032156CNOT410098.780Aotus_nancymaae
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSACLG00000002514cnot4a9190.566Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028217Cnot410092.620ENSAMXG00000011473cnot4b10072.239Astyanax_mexicanus
MGP_CAROLIEiJ_G0028217Cnot410072.866ENSAMXG00000001373cnot4a10071.951Astyanax_mexicanus
MGP_CAROLIEiJ_G0028217Cnot410098.787ENSBTAG00000017919CNOT410098.787Bos_taurus
MGP_CAROLIEiJ_G0028217Cnot410098.780ENSCJAG00000012532CNOT410098.780Callithrix_jacchus
MGP_CAROLIEiJ_G0028217Cnot410099.129ENSCAFG00000003223CNOT410099.129Canis_familiaris
MGP_CAROLIEiJ_G0028217Cnot410099.129ENSCAFG00020000093CNOT410099.129Canis_lupus_dingo
MGP_CAROLIEiJ_G0028217Cnot410098.955ENSCHIG00000010955CNOT410098.955Capra_hircus
MGP_CAROLIEiJ_G0028217Cnot410098.955ENSTSYG00000000893CNOT410098.955Carlito_syrichta
MGP_CAROLIEiJ_G0028217Cnot410094.803ENSCAPG00000006213CNOT410094.803Cavia_aperea
MGP_CAROLIEiJ_G0028217Cnot410097.735ENSCPOG00000011526CNOT410097.735Cavia_porcellus
MGP_CAROLIEiJ_G0028217Cnot410098.787ENSCCAG00000024414CNOT410098.787Cebus_capucinus
MGP_CAROLIEiJ_G0028217Cnot410098.787ENSCATG00000022607CNOT410098.787Cercocebus_atys
MGP_CAROLIEiJ_G0028217Cnot410098.258ENSCLAG00000001857CNOT410098.258Chinchilla_lanigera
MGP_CAROLIEiJ_G0028217Cnot410098.174ENSCSAG00000009096CNOT410098.174Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028217Cnot46899.465ENSCHOG00000010412CNOT46399.465Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028217Cnot410094.406ENSCPBG00000004959CNOT410094.406Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028217Cnot46669.323ENSCING00000004364-9341.168Ciona_intestinalis
MGP_CAROLIEiJ_G0028217Cnot410098.606ENSCANG00000029319CNOT410098.606Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028217Cnot410099.653ENSCGRG00001014651Cnot410099.653Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028217Cnot410099.652ENSCGRG00000005727Cnot410099.652Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028217Cnot49490.566ENSCSEG00000015080cnot4a8490.566Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSCVAG00000009399cnot4a9190.566Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028217Cnot410066.667ENSDARG00000007639cnot4b10066.089Danio_rerio
MGP_CAROLIEiJ_G0028217Cnot410070.789ENSDARG00000007045cnot4a10070.284Danio_rerio
MGP_CAROLIEiJ_G0028217Cnot410096.643ENSDNOG00000009409CNOT410096.643Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSDORG00000012268Cnot410098.614Dipodomys_ordii
MGP_CAROLIEiJ_G0028217Cnot410091.329ENSETEG00000013407CNOT48993.769Echinops_telfairi
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSEASG00005014430CNOT410098.614Equus_asinus_asinus
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSECAG00000020262CNOT410098.614Equus_caballus
MGP_CAROLIEiJ_G0028217Cnot410073.887ENSELUG00000011540cnot4b9871.625Esox_lucius
MGP_CAROLIEiJ_G0028217Cnot49990.637ENSELUG00000008742cnot4a9090.637Esox_lucius
MGP_CAROLIEiJ_G0028217Cnot410099.129ENSFCAG00000011904CNOT410099.129Felis_catus
MGP_CAROLIEiJ_G0028217Cnot410087.827ENSFALG00000011194CNOT410087.827Ficedula_albicollis
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSFDAG00000013525CNOT410098.614Fukomys_damarensis
MGP_CAROLIEiJ_G0028217Cnot410089.259ENSFHEG00000006608cnot4a10072.205Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028217Cnot49659.642ENSGMOG00000001329cnot4a9759.719Gadus_morhua
MGP_CAROLIEiJ_G0028217Cnot410093.706ENSGALG00000011682CNOT410093.706Gallus_gallus
MGP_CAROLIEiJ_G0028217Cnot49990.189ENSGACG00000004276cnot4a9190.189Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028217Cnot410093.846ENSGAGG00000017331CNOT410093.846Gopherus_agassizii
MGP_CAROLIEiJ_G0028217Cnot49297.785ENSGGOG00000000142CNOT49997.885Gorilla_gorilla
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSHBUG00000000027cnot4a9190.566Haplochromis_burtoni
MGP_CAROLIEiJ_G0028217Cnot410098.960ENSHGLG00000011533CNOT410098.960Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028217Cnot410098.960ENSHGLG00100013058CNOT410098.960Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028217Cnot49889.434ENSHCOG00000015815cnot4a9189.434Hippocampus_comes
MGP_CAROLIEiJ_G0028217Cnot410071.577ENSIPUG00000016994cnot4b10070.982Ictalurus_punctatus
MGP_CAROLIEiJ_G0028217Cnot410091.481ENSIPUG00000006393cnot49191.481Ictalurus_punctatus
MGP_CAROLIEiJ_G0028217Cnot410098.955ENSSTOG00000007717CNOT410098.955Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028217Cnot410081.185ENSJJAG00000019991-10081.185Jaculus_jaculus
MGP_CAROLIEiJ_G0028217Cnot410098.606ENSJJAG00000016618Cnot410098.606Jaculus_jaculus
MGP_CAROLIEiJ_G0028217Cnot49490.566ENSKMAG00000004581cnot4a10072.755Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028217Cnot49990.943ENSLBEG00000009999cnot4a9190.943Labrus_bergylta
MGP_CAROLIEiJ_G0028217Cnot410083.022ENSLACG00000002647CNOT49983.022Latimeria_chalumnae
MGP_CAROLIEiJ_G0028217Cnot410093.382ENSLOCG00000016126cnot4a9293.382Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028217Cnot410096.224ENSLAFG00000000709CNOT410096.224Loxodonta_africana
MGP_CAROLIEiJ_G0028217Cnot410098.780ENSMFAG00000046349CNOT410098.780Macaca_fascicularis
MGP_CAROLIEiJ_G0028217Cnot410098.787ENSMMUG00000016181CNOT410098.787Macaca_mulatta
MGP_CAROLIEiJ_G0028217Cnot410098.780ENSMNEG00000042164CNOT410098.780Macaca_nemestrina
MGP_CAROLIEiJ_G0028217Cnot410098.780ENSMLEG00000032709CNOT410098.780Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSMAMG00000023194cnot4a9190.566Mastacembelus_armatus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSMZEG00005007312cnot4a9190.566Maylandia_zebra
MGP_CAROLIEiJ_G0028217Cnot410087.304ENSMGAG00000011788CNOT410087.304Meleagris_gallopavo
MGP_CAROLIEiJ_G0028217Cnot410099.307ENSMAUG00000020415Cnot410099.307Mesocricetus_auratus
MGP_CAROLIEiJ_G0028217Cnot410099.133ENSMICG00000001667CNOT410099.133Microcebus_murinus
MGP_CAROLIEiJ_G0028217Cnot410099.480ENSMOCG00000020955Cnot410099.480Microtus_ochrogaster
MGP_CAROLIEiJ_G0028217Cnot49673.871ENSMMOG00000014565cnot4a9775.167Mola_mola
MGP_CAROLIEiJ_G0028217Cnot410096.348ENSMODG00000014068CNOT410096.348Monodelphis_domestica
MGP_CAROLIEiJ_G0028217Cnot49390.566ENSMALG00000011662cnot4a8090.566Monopterus_albus
MGP_CAROLIEiJ_G0028217Cnot410099.579ENSMUSG00000038784Cnot410099.579Mus_musculus
MGP_CAROLIEiJ_G0028217Cnot410099.579MGP_PahariEiJ_G0021974Cnot410099.579Mus_pahari
MGP_CAROLIEiJ_G0028217Cnot410099.438MGP_SPRETEiJ_G0029216Cnot410099.438Mus_spretus
MGP_CAROLIEiJ_G0028217Cnot410098.174ENSMPUG00000004089CNOT410098.174Mustela_putorius_furo
MGP_CAROLIEiJ_G0028217Cnot410098.447ENSMLUG00000008260CNOT410098.447Myotis_lucifugus
MGP_CAROLIEiJ_G0028217Cnot410098.440ENSNGAG00000015030Cnot410098.440Nannospalax_galili
MGP_CAROLIEiJ_G0028217Cnot410070.934ENSNBRG00000021144cnot4a10070.526Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028217Cnot410098.267ENSNLEG00000013352CNOT410098.267Nomascus_leucogenys
MGP_CAROLIEiJ_G0028217Cnot48895.739ENSOPRG00000001023CNOT48295.739Ochotona_princeps
MGP_CAROLIEiJ_G0028217Cnot410097.920ENSODEG00000012975CNOT410097.920Octodon_degus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSONIG00000008656cnot4a9190.566Oreochromis_niloticus
MGP_CAROLIEiJ_G0028217Cnot410094.538ENSOANG00000005006CNOT410094.538Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028217Cnot410098.034ENSOCUG00000013448CNOT410098.034Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028217Cnot410073.089ENSORLG00000003727cnot4a10072.630Oryzias_latipes
MGP_CAROLIEiJ_G0028217Cnot410072.659ENSORLG00020015684cnot4a10072.054Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028217Cnot410073.242ENSORLG00015008470cnot4a10072.630Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028217Cnot410072.171ENSOMEG00000011084cnot4a10071.560Oryzias_melastigma
MGP_CAROLIEiJ_G0028217Cnot410097.762ENSOGAG00000015499CNOT410097.762Otolemur_garnettii
MGP_CAROLIEiJ_G0028217Cnot410097.203ENSOARG00000008803CNOT410097.203Ovis_aries
MGP_CAROLIEiJ_G0028217Cnot410098.440ENSPPAG00000041937CNOT410098.440Pan_paniscus
MGP_CAROLIEiJ_G0028217Cnot410099.133ENSPPRG00000023940CNOT410099.133Panthera_pardus
MGP_CAROLIEiJ_G0028217Cnot410099.129ENSPTIG00000016601CNOT410099.129Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028217Cnot410098.440ENSPTRG00000019727CNOT410098.440Pan_troglodytes
MGP_CAROLIEiJ_G0028217Cnot410098.614ENSPANG00000017724CNOT410098.614Papio_anubis
MGP_CAROLIEiJ_G0028217Cnot410072.093ENSPKIG00000018137cnot4a10071.783Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028217Cnot410086.144ENSPSIG00000011256CNOT410086.275Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028217Cnot410073.002ENSPMGG00000005671cnot4a10072.851Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028217Cnot410099.480ENSPEMG00000021566Cnot410099.480Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028217Cnot410096.100ENSPCIG00000029622CNOT49695.927Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSPFOG00000002228cnot4a9190.566Poecilia_formosa
MGP_CAROLIEiJ_G0028217Cnot410072.989ENSPLAG00000001780cnot4a10072.534Poecilia_latipinna
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSPMEG00000006852cnot4a9190.566Poecilia_mexicana
MGP_CAROLIEiJ_G0028217Cnot410071.307ENSPREG00000008171cnot4a10069.559Poecilia_reticulata
MGP_CAROLIEiJ_G0028217Cnot410097.893ENSPPYG00000018026CNOT410097.893Pongo_abelii
MGP_CAROLIEiJ_G0028217Cnot410099.129ENSPCOG00000019907CNOT410099.129Propithecus_coquereli
MGP_CAROLIEiJ_G0028217Cnot49795.665ENSPVAG00000004905CNOT49095.665Pteropus_vampyrus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSPNYG00000004276cnot4a9190.566Pundamilia_nyererei
MGP_CAROLIEiJ_G0028217Cnot410093.727ENSPNAG00000008679cnot4b10074.738Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028217Cnot410072.790ENSPNAG00000020433cnot4a10071.526Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028217Cnot410098.876ENSRNOG00000010795Cnot410098.876Rattus_norvegicus
MGP_CAROLIEiJ_G0028217Cnot410098.787ENSRBIG00000043977CNOT410098.787Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028217Cnot410098.606ENSSBOG00000020808CNOT410098.606Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028217Cnot410096.208ENSSHAG00000013639CNOT410096.208Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028217Cnot410091.912ENSSFOG00015017285CNOT49291.912Scleropages_formosus
MGP_CAROLIEiJ_G0028217Cnot410090.074ENSSFOG00015002019cnot4a9190.074Scleropages_formosus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSSMAG00000008614cnot4a9190.566Scophthalmus_maximus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSSDUG00000022635cnot4a9190.566Seriola_dumerili
MGP_CAROLIEiJ_G0028217Cnot410071.231ENSSDUG00000018585cnot4b10071.582Seriola_dumerili
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSSLDG00000015770cnot4a9190.566Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028217Cnot410061.765ENSSLDG00000014347cnot4b9565.677Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028217Cnot410094.720ENSSPUG00000004677CNOT410094.720Sphenodon_punctatus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSSPAG00000012329cnot4a9190.566Stegastes_partitus
MGP_CAROLIEiJ_G0028217Cnot410098.960ENSSSCG00000021354CNOT410098.960Sus_scrofa
MGP_CAROLIEiJ_G0028217Cnot410087.958ENSTGUG00000009161CNOT410087.958Taeniopygia_guttata
MGP_CAROLIEiJ_G0028217Cnot410089.259ENSTRUG00000016861cnot4a9289.259Takifugu_rubripes
MGP_CAROLIEiJ_G0028217Cnot410070.648ENSTNIG00000016000cnot4a10069.595Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028217Cnot49497.059ENSTBEG00000002202CNOT48692.730Tupaia_belangeri
MGP_CAROLIEiJ_G0028217Cnot49796.825ENSTTRG00000005122CNOT49096.825Tursiops_truncatus
MGP_CAROLIEiJ_G0028217Cnot410099.133ENSUAMG00000026759CNOT410099.133Ursus_americanus
MGP_CAROLIEiJ_G0028217Cnot410099.133ENSUMAG00000015351CNOT410099.133Ursus_maritimus
MGP_CAROLIEiJ_G0028217Cnot410099.133ENSVVUG00000006200CNOT410099.133Vulpes_vulpes
MGP_CAROLIEiJ_G0028217Cnot410098.519ENSXETG00000010594cnot49298.519Xenopus_tropicalis
MGP_CAROLIEiJ_G0028217Cnot49572.097ENSXCOG00000020824cnot4a9870.992Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028217Cnot49990.566ENSXMAG00000016984cnot4a9190.566Xiphophorus_maculatus

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