EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028343 (Gene tree)
Gene ID: 110296088
Gene Symbol: Repin1
Alias: AP4|E430037F08Rik|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5210 bases
Position: chr6:43013886-43019095
Accession: 110296088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	1	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	2	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	3	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	4	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	5	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	6	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	7	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	8	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	9	10
MGP_CAROLIEiJ_P0073672	zf-C2H2	PF00096.26	8e-69	10	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	1	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	2	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	3	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	4	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	5	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	6	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	7	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	8	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	9	10
MGP_CAROLIEiJ_P0073673	zf-C2H2	PF00096.26	8e-69	10	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	1	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	2	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	3	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	4	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	5	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	6	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	7	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	8	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	9	10
MGP_CAROLIEiJ_P0073675	zf-C2H2	PF00096.26	4e-68	10	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	1	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	2	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	3	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	4	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	5	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	6	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	7	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	8	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	9	10
MGP_CAROLIEiJ_P0073676	zf-C2H2	PF00096.26	4.3e-68	10	10
MGP_CAROLIEiJ_P0073674	zf-C2H2	PF00096.26	2.6e-32	1	5
MGP_CAROLIEiJ_P0073674	zf-C2H2	PF00096.26	2.6e-32	2	5
MGP_CAROLIEiJ_P0073674	zf-C2H2	PF00096.26	2.6e-32	3	5
MGP_CAROLIEiJ_P0073674	zf-C2H2	PF00096.26	2.6e-32	4	5
MGP_CAROLIEiJ_P0073674	zf-C2H2	PF00096.26	2.6e-32	5	5
MGP_CAROLIEiJ_P0073672	zf-met	PF12874.7	2.9e-07	1	1
MGP_CAROLIEiJ_P0073673	zf-met	PF12874.7	2.9e-07	1	1
MGP_CAROLIEiJ_P0073674	zf-met	PF12874.7	5.7e-07	1	1
MGP_CAROLIEiJ_P0073675	zf-met	PF12874.7	1.2e-06	1	1
MGP_CAROLIEiJ_P0073676	zf-met	PF12874.7	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0073680	-	992	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0073673	-	2971	XM_021164627	MGP_CAROLIEiJ_P0073673	545 (aa)	XP_021020286	UPI000A315E4F
MGP_CAROLIEiJ_T0073672	-	3157	XM_021164625	MGP_CAROLIEiJ_P0073672	545 (aa)	XP_021020284	UPI000A315E4F
MGP_CAROLIEiJ_T0073677	-	655	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0073676	-	3069	XM_021164623	MGP_CAROLIEiJ_P0073676	601 (aa)	XP_021020282	UPI000A316EF3
MGP_CAROLIEiJ_T0073675	-	3150	-	MGP_CAROLIEiJ_P0073675	598 (aa)	-	UPI000A318B9B
MGP_CAROLIEiJ_T0073674	-	1265	-	MGP_CAROLIEiJ_P0073674	360 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0028343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0028343	Repin1	92	32.021	MGP_CAROLIEiJ_G0021132	Zfp948	92	33.703
MGP_CAROLIEiJ_G0028343	Repin1	99	41.667	MGP_CAROLIEiJ_G0022445	Zfp236	81	44.304
MGP_CAROLIEiJ_G0028343	Repin1	100	32.458	MGP_CAROLIEiJ_G0031203	Zfp882	94	31.991
MGP_CAROLIEiJ_G0028343	Repin1	91	41.667	MGP_CAROLIEiJ_G0027176	Zbtb49	89	47.222
MGP_CAROLIEiJ_G0028343	Repin1	93	31.429	MGP_CAROLIEiJ_G0029356	Zfp574	97	32.783
MGP_CAROLIEiJ_G0028343	Repin1	92	40.823	MGP_CAROLIEiJ_G0029321	Zfp112	53	40.823
MGP_CAROLIEiJ_G0028343	Repin1	98	46.591	MGP_CAROLIEiJ_G0029322	Zfp235	67	34.559
MGP_CAROLIEiJ_G0028343	Repin1	92	37.425	MGP_CAROLIEiJ_G0029326	Zfp108	66	36.604
MGP_CAROLIEiJ_G0028343	Repin1	92	38.258	MGP_CAROLIEiJ_G0029327	Zfp93	69	38.438
MGP_CAROLIEiJ_G0028343	Repin1	95	39.937	MGP_CAROLIEiJ_G0029329	Zfp94	75	39.937
MGP_CAROLIEiJ_G0028343	Repin1	91	35.659	MGP_CAROLIEiJ_G0016391	Zfp672	92	41.250
MGP_CAROLIEiJ_G0028343	Repin1	92	37.079	MGP_CAROLIEiJ_G0016437	Zfp867	81	38.462
MGP_CAROLIEiJ_G0028343	Repin1	91	36.723	MGP_CAROLIEiJ_G0029612	Zfp141	50	39.623
MGP_CAROLIEiJ_G0028343	Repin1	92	35.976	MGP_CAROLIEiJ_G0029614	Zfp715	71	36.778
MGP_CAROLIEiJ_G0028343	Repin1	92	38.503	MGP_CAROLIEiJ_G0019949	Zfp251	64	44.615
MGP_CAROLIEiJ_G0028343	Repin1	91	33.333	MGP_CAROLIEiJ_G0030525	Zfp646	78	31.058
MGP_CAROLIEiJ_G0028343	Repin1	98	45.366	MGP_CAROLIEiJ_G0024261	Zfp661	70	45.366
MGP_CAROLIEiJ_G0028343	Repin1	92	42.424	MGP_CAROLIEiJ_G0031579	Zfp1	60	42.424
MGP_CAROLIEiJ_G0028343	Repin1	91	46.584	MGP_CAROLIEiJ_G0024901	Mynn	51	44.503
MGP_CAROLIEiJ_G0028343	Repin1	95	40.000	MGP_CAROLIEiJ_G0016306	Zfp354a	75	40.000
MGP_CAROLIEiJ_G0028343	Repin1	92	36.667	MGP_CAROLIEiJ_G0015655	-	78	37.500
MGP_CAROLIEiJ_G0028343	Repin1	95	37.500	MGP_CAROLIEiJ_G0018274	Zkscan4	56	37.500
MGP_CAROLIEiJ_G0028343	Repin1	92	46.094	MGP_CAROLIEiJ_G0029490	Zfp420	98	46.094
MGP_CAROLIEiJ_G0028343	Repin1	92	33.411	MGP_CAROLIEiJ_G0018661	Zfp759	86	41.558
MGP_CAROLIEiJ_G0028343	Repin1	95	42.012	MGP_CAROLIEiJ_G0018660	-	71	42.012
MGP_CAROLIEiJ_G0028343	Repin1	90	42.069	MGP_CAROLIEiJ_G0028463	Prdm5	68	42.361
MGP_CAROLIEiJ_G0028343	Repin1	86	31.466	MGP_CAROLIEiJ_G0020389	Zfp597	68	31.349
MGP_CAROLIEiJ_G0028343	Repin1	92	31.280	MGP_CAROLIEiJ_G0031420	Zfp319	97	31.778
MGP_CAROLIEiJ_G0028343	Repin1	91	45.876	MGP_CAROLIEiJ_G0030502	-	63	45.876
MGP_CAROLIEiJ_G0028343	Repin1	91	45.876	MGP_CAROLIEiJ_G0030501	Zfp764	63	45.876
MGP_CAROLIEiJ_G0028343	Repin1	94	45.550	MGP_CAROLIEiJ_G0029135	Zfp628	60	45.545
MGP_CAROLIEiJ_G0028343	Repin1	86	45.122	MGP_CAROLIEiJ_G0026604	Zfp683	51	44.706
MGP_CAROLIEiJ_G0028343	Repin1	92	35.714	MGP_CAROLIEiJ_G0024724	Zfp64	74	40.659
MGP_CAROLIEiJ_G0028343	Repin1	92	40.278	MGP_CAROLIEiJ_G0029324	Zfp111	73	35.683
MGP_CAROLIEiJ_G0028343	Repin1	94	34.200	MGP_CAROLIEiJ_G0029427	-	89	45.455
MGP_CAROLIEiJ_G0028343	Repin1	92	38.614	MGP_CAROLIEiJ_G0026744	Zbtb17	63	41.250
MGP_CAROLIEiJ_G0028343	Repin1	90	47.287	MGP_CAROLIEiJ_G0027508	Gfi1	100	47.287
MGP_CAROLIEiJ_G0028343	Repin1	91	37.574	MGP_CAROLIEiJ_G0021128	Zfp51	73	48.333
MGP_CAROLIEiJ_G0028343	Repin1	80	34.831	MGP_CAROLIEiJ_G0029144	-	75	31.716
MGP_CAROLIEiJ_G0028343	Repin1	63	30.738	MGP_CAROLIEiJ_G0029146	Zfp784	68	33.761
MGP_CAROLIEiJ_G0028343	Repin1	92	33.043	MGP_CAROLIEiJ_G0029143	-	84	33.043
MGP_CAROLIEiJ_G0028343	Repin1	86	45.000	MGP_CAROLIEiJ_G0030498	Zfp768	51	47.090
MGP_CAROLIEiJ_G0028343	Repin1	98	38.390	MGP_CAROLIEiJ_G0018683	Zfp493	92	38.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028343	Repin1	100	84.278	ENSCHIG00000019982	REPIN1	100	84.517	Capra_hircus
MGP_CAROLIEiJ_G0028343	Repin1	100	90.693	ENSCGRG00001017330	Repin1	99	88.982	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028343	Repin1	100	89.599	ENSCGRG00000015472	Repin1	99	88.176	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028343	Repin1	100	91.075	ENSMAUG00000005776	Repin1	100	91.075	Mesocricetus_auratus
MGP_CAROLIEiJ_G0028343	Repin1	100	91.971	ENSMOCG00000021124	Repin1	100	91.542	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028343	Repin1	93	61.176	ENSMODG00000003616	-	92	60.294	Monodelphis_domestica
MGP_CAROLIEiJ_G0028343	Repin1	100	99.334	ENSMUSG00000052751	Repin1	100	99.334	Mus_musculus
MGP_CAROLIEiJ_G0028343	Repin1	100	97.436	MGP_PahariEiJ_G0022097	Repin1	100	97.436	Mus_pahari
MGP_CAROLIEiJ_G0028343	Repin1	100	99.450	MGP_SPRETEiJ_G0029346	Repin1	100	99.450	Mus_spretus
MGP_CAROLIEiJ_G0028343	Repin1	100	92.701	ENSPEMG00000000870	Repin1	100	91.060	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028343	Repin1	100	95.620	ENSRNOG00000008239	Repin1	100	95.033	Rattus_norvegicus