EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0028494 (Gene tree)
Gene ID
110296160
Gene Symbol
Polr1a
Alias
194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
68824 bases
Position
chr6:68796888-68865711
Accession
110296160
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0074277RNA_pol_Rpb1_5PF04998.171.3e-10211
MGP_CAROLIEiJ_P0074277RNA_pol_Rpb1_4PF05000.171.5e-2511
MGP_CAROLIEiJ_P0074277RNA_pol_Rpb1_2PF00623.201e-6911
MGP_CAROLIEiJ_P0074277RNA_pol_Rpb1_3PF04983.183.8e-3711
MGP_CAROLIEiJ_P0074277RNA_pol_Rpb1_1PF04997.128.4e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0074283-625-MGP_CAROLIEiJ_P007428347 (aa)--
MGP_CAROLIEiJ_T0074282-584--- (aa)--
MGP_CAROLIEiJ_T0074281-352--- (aa)--
MGP_CAROLIEiJ_T0074280-320--- (aa)--
MGP_CAROLIEiJ_T0074285-4591-MGP_CAROLIEiJ_P0074285742 (aa)--
MGP_CAROLIEiJ_T0074278-1502--- (aa)--
MGP_CAROLIEiJ_T0074279-3302--- (aa)--
MGP_CAROLIEiJ_T0074276-3390-MGP_CAROLIEiJ_P0074276282 (aa)--
MGP_CAROLIEiJ_T0074277-9229-MGP_CAROLIEiJ_P00742771717 (aa)XP_021020386UPI000A31889E
MGP_CAROLIEiJ_T0074284-549--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0028494's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028494's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0028494Polr1a6933.333MGP_CAROLIEiJ_G0016587Polr2a5437.143
MGP_CAROLIEiJ_G0028494Polr1a6832.441MGP_CAROLIEiJ_G0019016Polr3a7732.551
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0028494Polr1a10085.524ENSG00000068654POLR1A10085.929Homo_sapiens
MGP_CAROLIEiJ_G0028494Polr1a9952.857ENSAPOG00000017945polr1a9967.309Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028494Polr1a10086.477ENSAMEG00000005807POLR1A10088.525Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028494Polr1a9667.082ENSACIG00000022147polr1a10066.528Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028494Polr1a10065.449ENSAOCG00000017336polr1a10067.583Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028494Polr1a10065.391ENSAPEG00000016105polr1a9771.528Amphiprion_percula
MGP_CAROLIEiJ_G0028494Polr1a10064.948ENSATEG00000016773polr1a10064.726Anabas_testudineus
MGP_CAROLIEiJ_G0028494Polr1a9965.390ENSAPLG00000013871POLR1A9972.079Anas_platyrhynchos
MGP_CAROLIEiJ_G0028494Polr1a9968.522ENSACAG00000012141POLR1A9967.686Anolis_carolinensis
MGP_CAROLIEiJ_G0028494Polr1a10085.632ENSANAG00000033927POLR1A10085.805Aotus_nancymaae
MGP_CAROLIEiJ_G0028494Polr1a10061.574ENSACLG00000020541polr1a10061.775Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028494Polr1a5660.613ENSAMXG00000011553-9564.540Astyanax_mexicanus
MGP_CAROLIEiJ_G0028494Polr1a8558.159ENSAMXG00000011559-8558.159Astyanax_mexicanus
MGP_CAROLIEiJ_G0028494Polr1a10086.485ENSBTAG00000006481POLR1A10086.485Bos_taurus
MGP_CAROLIEiJ_G0028494Polr1a9939.712WBGene00012999rpoa-19838.561Caenorhabditis_elegans
MGP_CAROLIEiJ_G0028494Polr1a10084.887ENSCJAG00000019547POLR1A10085.292Callithrix_jacchus
MGP_CAROLIEiJ_G0028494Polr1a10085.731ENSCAFG00000007613POLR1A10085.963Canis_familiaris
MGP_CAROLIEiJ_G0028494Polr1a10085.963ENSCAFG00020014752POLR1A10086.195Canis_lupus_dingo
MGP_CAROLIEiJ_G0028494Polr1a10085.556ENSCHIG00000018204POLR1A10085.274Capra_hircus
MGP_CAROLIEiJ_G0028494Polr1a10084.852ENSTSYG00000002761POLR1A10084.968Carlito_syrichta
MGP_CAROLIEiJ_G0028494Polr1a9782.247ENSCAPG00000010132POLR1A10082.307Cavia_aperea
MGP_CAROLIEiJ_G0028494Polr1a10086.736ENSCPOG00000012350POLR1A10086.795Cavia_porcellus
MGP_CAROLIEiJ_G0028494Polr1a10085.408ENSCCAG00000019839POLR1A10085.814Cebus_capucinus
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSCATG00000029786POLR1A10085.739Cercocebus_atys
MGP_CAROLIEiJ_G0028494Polr1a10086.818ENSCLAG00000005187POLR1A10086.702Chinchilla_lanigera
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSCSAG00000016251POLR1A10085.739Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028494Polr1a9972.760ENSCHOG00000003766-8490.000Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028494Polr1a9973.577ENSCPBG00000001115POLR1A9973.399Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028494Polr1a9943.377ENSCING00000007684-9941.902Ciona_intestinalis
MGP_CAROLIEiJ_G0028494Polr1a9076.923ENSCSAVG00000007184-9750.459Ciona_savignyi
MGP_CAROLIEiJ_G0028494Polr1a10083.044ENSCANG00000031785POLR1A10082.986Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028494Polr1a10090.457ENSCGRG00001006651Polr1a10087.551Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028494Polr1a9988.530ENSCGRG00000007004-9788.571Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028494Polr1a10090.457ENSCGRG00000010834Polr1a10091.910Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028494Polr1a10061.650ENSCSEG00000020190polr1a10061.150Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028494Polr1a10063.668ENSCVAG00000020941polr1a10063.820Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028494Polr1a10066.202ENSDARG00000098375polr1a10066.028Danio_rerio
MGP_CAROLIEiJ_G0028494Polr1a10080.568ENSDNOG00000010829POLR1A10080.313Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028494Polr1a10087.231ENSDORG00000008298Polr1a10087.377Dipodomys_ordii
MGP_CAROLIEiJ_G0028494Polr1a7944.534FBgn0019938RpI19942.940Drosophila_melanogaster
MGP_CAROLIEiJ_G0028494Polr1a9980.287ENSETEG00000000412-7296.875Echinops_telfairi
MGP_CAROLIEiJ_G0028494Polr1a8166.667ENSEBUG00000005667-9366.667Eptatretus_burgeri
MGP_CAROLIEiJ_G0028494Polr1a10086.624ENSEASG00005001625POLR1A10087.030Equus_asinus_asinus
MGP_CAROLIEiJ_G0028494Polr1a10086.508ENSECAG00000036306-10088.545Equus_caballus
MGP_CAROLIEiJ_G0028494Polr1a10086.508ENSECAG00000030510-10088.545Equus_caballus
MGP_CAROLIEiJ_G0028494Polr1a10086.508ENSECAG00000010092POLR1A10088.545Equus_caballus
MGP_CAROLIEiJ_G0028494Polr1a8592.553ENSEEUG00000000676POLR1A8592.553Erinaceus_europaeus
MGP_CAROLIEiJ_G0028494Polr1a10065.630ENSELUG00000012769polr1a9966.201Esox_lucius
MGP_CAROLIEiJ_G0028494Polr1a10086.087ENSFCAG00000008966POLR1A10086.261Felis_catus
MGP_CAROLIEiJ_G0028494Polr1a9971.210ENSFALG00000010082POLR1A9971.269Ficedula_albicollis
MGP_CAROLIEiJ_G0028494Polr1a10086.977ENSFDAG00000013726POLR1A10087.035Fukomys_damarensis
MGP_CAROLIEiJ_G0028494Polr1a10060.787ENSFHEG00000005996polr1a10060.799Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028494Polr1a10059.953ENSGMOG00000002230polr1a10059.744Gadus_morhua
MGP_CAROLIEiJ_G0028494Polr1a9960.932ENSGALG00000038160-9968.418Gallus_gallus
MGP_CAROLIEiJ_G0028494Polr1a10063.747ENSGAFG00000015266polr1a10063.453Gambusia_affinis
MGP_CAROLIEiJ_G0028494Polr1a10063.673ENSGACG00000018791polr1a10063.767Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028494Polr1a8657.028ENSGAGG00000020105-8957.028Gopherus_agassizii
MGP_CAROLIEiJ_G0028494Polr1a9968.139ENSGAGG00000004984-9579.798Gopherus_agassizii
MGP_CAROLIEiJ_G0028494Polr1a10085.524ENSGGOG00000001788POLR1A10085.929Gorilla_gorilla
MGP_CAROLIEiJ_G0028494Polr1a8669.970ENSHBUG00000020021polr1a9870.265Haplochromis_burtoni
MGP_CAROLIEiJ_G0028494Polr1a10087.609ENSHGLG00000006334POLR1A10087.958Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028494Polr1a10087.297ENSHGLG00100006614POLR1A10087.645Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028494Polr1a10061.645ENSHCOG00000003345polr1a10060.437Hippocampus_comes
MGP_CAROLIEiJ_G0028494Polr1a10065.567ENSIPUG00000013174polr1a10065.467Ictalurus_punctatus
MGP_CAROLIEiJ_G0028494Polr1a10085.498ENSSTOG00000012580POLR1A10085.556Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028494Polr1a10088.263ENSJJAG00000013113Polr1a10088.379Jaculus_jaculus
MGP_CAROLIEiJ_G0028494Polr1a10065.023ENSKMAG00000007399polr1a10064.651Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028494Polr1a9468.025ENSLBEG00000015401polr1a9967.983Labrus_bergylta
MGP_CAROLIEiJ_G0028494Polr1a9962.590ENSLACG00000003218polr1a9976.009Latimeria_chalumnae
MGP_CAROLIEiJ_G0028494Polr1a10070.139ENSLOCG00000010881polr1a10069.470Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028494Polr1a10085.515ENSLAFG00000014948POLR1A10085.590Loxodonta_africana
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSMFAG00000046097POLR1A10085.450Macaca_fascicularis
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSMMUG00000015815POLR1A10085.450Macaca_mulatta
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSMNEG00000043313POLR1A10085.450Macaca_nemestrina
MGP_CAROLIEiJ_G0028494Polr1a10085.003ENSMLEG00000042428POLR1A10085.104Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028494Polr1a10064.893ENSMAMG00000016565polr1a10065.505Mastacembelus_armatus
MGP_CAROLIEiJ_G0028494Polr1a10064.757ENSMZEG00005004915polr1a10064.965Maylandia_zebra
MGP_CAROLIEiJ_G0028494Polr1a9968.565ENSMGAG00000013111POLR1A9968.623Meleagris_gallopavo
MGP_CAROLIEiJ_G0028494Polr1a10090.310ENSMAUG00000008497Polr1a10093.011Mesocricetus_auratus
MGP_CAROLIEiJ_G0028494Polr1a10086.458ENSMICG00000000757POLR1A10086.574Microcebus_murinus
MGP_CAROLIEiJ_G0028494Polr1a10092.317ENSMOCG00000000122Polr1a10092.666Microtus_ochrogaster
MGP_CAROLIEiJ_G0028494Polr1a10064.377ENSMMOG00000010216polr1a10064.381Mola_mola
MGP_CAROLIEiJ_G0028494Polr1a10074.140ENSMODG00000009335POLR1A10074.140Monodelphis_domestica
MGP_CAROLIEiJ_G0028494Polr1a10064.447ENSMALG00000013363polr1a10064.294Monopterus_albus
MGP_CAROLIEiJ_G0028494Polr1a10098.195ENSMUSG00000049553Polr1a10098.195Mus_musculus
MGP_CAROLIEiJ_G0028494Polr1a10095.050MGP_PahariEiJ_G0022230Polr1a10095.050Mus_pahari
MGP_CAROLIEiJ_G0028494Polr1a10097.872MGP_SPRETEiJ_G0029499Polr1a10097.872Mus_spretus
MGP_CAROLIEiJ_G0028494Polr1a10086.319ENSMPUG00000009135POLR1A10086.493Mustela_putorius_furo
MGP_CAROLIEiJ_G0028494Polr1a10085.177ENSMLUG00000015723POLR1A10085.350Myotis_lucifugus
MGP_CAROLIEiJ_G0028494Polr1a10089.354ENSNGAG00000017907Polr1a10089.878Nannospalax_galili
MGP_CAROLIEiJ_G0028494Polr1a10064.965ENSNBRG00000000519polr1a10065.081Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028494Polr1a10083.401ENSNLEG00000002264POLR1A10083.689Nomascus_leucogenys
MGP_CAROLIEiJ_G0028494Polr1a7592.913ENSMEUG00000011665-7592.913Notamacropus_eugenii
MGP_CAROLIEiJ_G0028494Polr1a9980.658ENSOPRG00000008269POLR1A10080.624Ochotona_princeps
MGP_CAROLIEiJ_G0028494Polr1a10087.151ENSODEG00000003542POLR1A10087.558Octodon_degus
MGP_CAROLIEiJ_G0028494Polr1a10065.255ENSONIG00000015895polr1a10065.009Oreochromis_niloticus
MGP_CAROLIEiJ_G0028494Polr1a6567.748ENSOANG00000000237-10067.683Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028494Polr1a9067.717ENSOANG00000012384-10070.219Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028494Polr1a10087.166ENSOCUG00000010138POLR1A10087.282Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028494Polr1a10064.542ENSORLG00000008753polr1a9964.327Oryzias_latipes
MGP_CAROLIEiJ_G0028494Polr1a10063.210ENSORLG00020020726polr1a9963.051Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028494Polr1a9672.340ENSORLG00015016071polr1a9972.340Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028494Polr1a8258.874ENSOMEG00000019264-10049.530Oryzias_melastigma
MGP_CAROLIEiJ_G0028494Polr1a5657.783ENSOMEG00000019310-9561.793Oryzias_melastigma
MGP_CAROLIEiJ_G0028494Polr1a10086.798ENSOGAG00000004031POLR1A10086.450Otolemur_garnettii
MGP_CAROLIEiJ_G0028494Polr1a10085.946ENSOARG00000020601POLR1A10085.665Ovis_aries
MGP_CAROLIEiJ_G0028494Polr1a10085.350ENSPPAG00000042450POLR1A10085.756Pan_paniscus
MGP_CAROLIEiJ_G0028494Polr1a10086.203ENSPPRG00000006702POLR1A10086.377Panthera_pardus
MGP_CAROLIEiJ_G0028494Polr1a10085.731ENSPTIG00000018783POLR1A10085.904Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSPTRG00000012147POLR1A10085.698Pan_troglodytes
MGP_CAROLIEiJ_G0028494Polr1a10085.640ENSPANG00000025908POLR1A10085.739Papio_anubis
MGP_CAROLIEiJ_G0028494Polr1a9474.306ENSPKIG00000005468polr1a9974.306Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028494Polr1a9967.426ENSPSIG00000009321-9971.759Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028494Polr1a9047.266ENSPMGG00000009718polr1a9567.725Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028494Polr1a10093.252ENSPEMG00000022224Polr1a10093.368Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028494Polr1a9578.171ENSPCIG00000004222POLR1A9977.703Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028494Polr1a10064.037ENSPFOG00000005025polr1a10064.037Poecilia_formosa
MGP_CAROLIEiJ_G0028494Polr1a10064.439ENSPLAG00000021389polr1a10064.053Poecilia_latipinna
MGP_CAROLIEiJ_G0028494Polr1a10062.167ENSPMEG00000006463polr1a10062.688Poecilia_mexicana
MGP_CAROLIEiJ_G0028494Polr1a10064.195ENSPREG00000002389polr1a10064.311Poecilia_reticulata
MGP_CAROLIEiJ_G0028494Polr1a10085.119ENSPPYG00000012217POLR1A10085.524Pongo_abelii
MGP_CAROLIEiJ_G0028494Polr1a9288.000ENSPCAG00000011582POLR1A9181.048Procavia_capensis
MGP_CAROLIEiJ_G0028494Polr1a10086.806ENSPCOG00000026987POLR1A10086.979Propithecus_coquereli
MGP_CAROLIEiJ_G0028494Polr1a10081.275ENSPVAG00000012674POLR1A9583.885Pteropus_vampyrus
MGP_CAROLIEiJ_G0028494Polr1a10064.757ENSPNYG00000000026polr1a10064.965Pundamilia_nyererei
MGP_CAROLIEiJ_G0028494Polr1a10066.860ENSPNAG00000019223polr1a9968.939Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028494Polr1a10094.409ENSRNOG00000009545Polr1a10094.351Rattus_norvegicus
MGP_CAROLIEiJ_G0028494Polr1a10085.350ENSRBIG00000028335POLR1A10085.466Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028494Polr1a10085.292ENSRROG00000031473POLR1A10085.408Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028494Polr1a9936.729YOR341WRPA1909936.523Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0028494Polr1a10085.177ENSSBOG00000030262POLR1A10085.582Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028494Polr1a10072.759ENSSHAG00000014739POLR1A10072.701Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028494Polr1a10067.151ENSSFOG00015019716polr1a10066.976Scleropages_formosus
MGP_CAROLIEiJ_G0028494Polr1a10064.421ENSSMAG00000014342polr1a10064.505Scophthalmus_maximus
MGP_CAROLIEiJ_G0028494Polr1a10066.068ENSSDUG00000014631polr1a10065.744Seriola_dumerili
MGP_CAROLIEiJ_G0028494Polr1a10064.186ENSSLDG00000024095polr1a9868.511Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028494Polr1a7595.745ENSSARG00000003136-7595.745Sorex_araneus
MGP_CAROLIEiJ_G0028494Polr1a9576.410ENSSPUG00000004215POLR1A9876.410Sphenodon_punctatus
MGP_CAROLIEiJ_G0028494Polr1a9948.043ENSSPAG00000016341polr1a9571.118Stegastes_partitus
MGP_CAROLIEiJ_G0028494Polr1a9981.720ENSSSCG00000008226POLR1A9987.395Sus_scrofa
MGP_CAROLIEiJ_G0028494Polr1a9970.383ENSTGUG00000010704POLR1A10070.029Taeniopygia_guttata
MGP_CAROLIEiJ_G0028494Polr1a10063.042ENSTRUG00000002210polr1a9963.415Takifugu_rubripes
MGP_CAROLIEiJ_G0028494Polr1a10059.353ENSTNIG00000010116polr1a10059.167Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028494Polr1a9982.796ENSTBEG00000008646POLR1A7496.460Tupaia_belangeri
MGP_CAROLIEiJ_G0028494Polr1a10082.472ENSTTRG00000008597POLR1A10082.472Tursiops_truncatus
MGP_CAROLIEiJ_G0028494Polr1a9972.401ENSUAMG00000000099-9872.500Ursus_americanus
MGP_CAROLIEiJ_G0028494Polr1a10082.933ENSUAMG00000012158-9486.791Ursus_americanus
MGP_CAROLIEiJ_G0028494Polr1a10085.217ENSUMAG00000006700POLR1A10085.449Ursus_maritimus
MGP_CAROLIEiJ_G0028494Polr1a10085.673ENSVVUG00000001245POLR1A10085.905Vulpes_vulpes
MGP_CAROLIEiJ_G0028494Polr1a10067.606ENSXETG00000001952polr1a10068.903Xenopus_tropicalis
MGP_CAROLIEiJ_G0028494Polr1a5362.416ENSXCOG00000013384polr1a9274.176Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028494Polr1a5259.690ENSXCOG00000007112-9162.828Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028494Polr1a10064.074ENSXMAG00000004032polr1a10063.610Xiphophorus_maculatus

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