EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0028698 (Gene tree)
Gene ID
110295952
Gene Symbol
Trnt1
Alias
2410043H24Rik|2610044E04Rik|CGI-47
Full Name
tRNA nucleotidyl transferase 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
13221 bases
Position
chr6:102296002-102309222
Accession
110295952
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0075258PolyA_polPF01743.204.5e-3411
MGP_CAROLIEiJ_P0075259PolyA_polPF01743.201.8e-3311
MGP_CAROLIEiJ_P0075260PolyA_polPF01743.201.8e-3311
MGP_CAROLIEiJ_P0075261PolyA_polPF01743.201.8e-3311
MGP_CAROLIEiJ_P0075266PolyA_polPF01743.207e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0075262-357--- (aa)--
MGP_CAROLIEiJ_T0075263-1176-MGP_CAROLIEiJ_P0075263272 (aa)--
MGP_CAROLIEiJ_T0075260-2279XM_021164370MGP_CAROLIEiJ_P0075260434 (aa)XP_021020029UPI000A318E76
MGP_CAROLIEiJ_T0075261-1399-MGP_CAROLIEiJ_P0075261434 (aa)-UPI000A318E76
MGP_CAROLIEiJ_T0075266-476-MGP_CAROLIEiJ_P0075266134 (aa)-UPI0006A69EF7
MGP_CAROLIEiJ_T0075264-367--- (aa)--
MGP_CAROLIEiJ_T0075265-784-MGP_CAROLIEiJ_P007526571 (aa)-UPI0006BBA044
MGP_CAROLIEiJ_T0075259-1615-MGP_CAROLIEiJ_P0075259434 (aa)-UPI000A318E76
MGP_CAROLIEiJ_T0075258-1913XM_021164373MGP_CAROLIEiJ_P0075258215 (aa)XP_021020032UPI00005ABBE7
Gene Model
Click here to download MGP_CAROLIEiJ_G0028698's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028698's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0028698Trnt110092.627ENSG00000072756TRNT110092.627Homo_sapiens
MGP_CAROLIEiJ_G0028698Trnt19075.000ENSAPOG00000013687trnt19568.550Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028698Trnt110090.596ENSAMEG00000014520TRNT110090.596Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028698Trnt19672.797ENSACIG00000021706trnt19967.689Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSAOCG00000024612trnt19967.059Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028698Trnt19662.835ENSAPEG00000022627trnt19560.732Amphiprion_percula
MGP_CAROLIEiJ_G0028698Trnt18876.151ENSATEG00000008928trnt19970.223Anabas_testudineus
MGP_CAROLIEiJ_G0028698Trnt18975.194ENSAPLG00000004258TRNT19675.194Anas_platyrhynchos
MGP_CAROLIEiJ_G0028698Trnt19974.654ENSACAG00000005657TRNT19974.654Anolis_carolinensis
MGP_CAROLIEiJ_G0028698Trnt110092.166ENSANAG00000024802TRNT110092.166Aotus_nancymaae
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSACLG00000022227trnt19966.824Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028698Trnt19473.828ENSAMXG00000003960trnt19769.194Astyanax_mexicanus
MGP_CAROLIEiJ_G0028698Trnt110091.475ENSBTAG00000019534TRNT110091.475Bos_taurus
MGP_CAROLIEiJ_G0028698Trnt18163.636WBGene00010089hpo-319444.418Caenorhabditis_elegans
MGP_CAROLIEiJ_G0028698Trnt110092.166ENSCJAG00000015466TRNT110092.166Callithrix_jacchus
MGP_CAROLIEiJ_G0028698Trnt110090.092ENSCAFG00000005985TRNT19990.092Canis_familiaris
MGP_CAROLIEiJ_G0028698Trnt110090.092ENSCAFG00020014746TRNT19990.092Canis_lupus_dingo
MGP_CAROLIEiJ_G0028698Trnt110091.475ENSCHIG00000007030TRNT19991.475Capra_hircus
MGP_CAROLIEiJ_G0028698Trnt110092.857ENSTSYG00000013390TRNT110092.857Carlito_syrichta
MGP_CAROLIEiJ_G0028698Trnt18775.132ENSCAPG00000006891TRNT110075.132Cavia_aperea
MGP_CAROLIEiJ_G0028698Trnt19991.375ENSCPOG00000007849TRNT19991.375Cavia_porcellus
MGP_CAROLIEiJ_G0028698Trnt19589.423ENSCCAG00000002919TRNT110091.521Cebus_capucinus
MGP_CAROLIEiJ_G0028698Trnt19993.072ENSCATG00000031985TRNT19993.072Cercocebus_atys
MGP_CAROLIEiJ_G0028698Trnt19992.541ENSCLAG00000005186TRNT19992.541Chinchilla_lanigera
MGP_CAROLIEiJ_G0028698Trnt110093.548ENSCSAG00000011052TRNT110093.548Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028698Trnt110087.313ENSCHOG00000005712TRNT18592.169Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028698Trnt19480.976ENSCPBG00000017636TRNT19480.976Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028698Trnt18162.644ENSCING00000007069-9944.282Ciona_intestinalis
MGP_CAROLIEiJ_G0028698Trnt18958.854ENSCSAVG00000007494-9944.575Ciona_savignyi
MGP_CAROLIEiJ_G0028698Trnt110093.088ENSCANG00000039030TRNT110093.088Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028698Trnt110096.774ENSCGRG00001009998Trnt110096.774Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028698Trnt110096.774ENSCGRG00000013410Trnt110096.774Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028698Trnt19075.000ENSCSEG00000008157trnt19668.627Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028698Trnt19075.410ENSCVAG00000019770trnt19669.363Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028698Trnt19672.727ENSDARG00000075297trnt19967.907Danio_rerio
MGP_CAROLIEiJ_G0028698Trnt110090.092ENSDNOG00000008837TRNT110090.092Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028698Trnt110090.553ENSDORG00000014035Trnt110090.553Dipodomys_ordii
MGP_CAROLIEiJ_G0028698Trnt18863.180FBgn0037369CG21008349.010Drosophila_melanogaster
MGP_CAROLIEiJ_G0028698Trnt19288.353ENSETEG00000018177TRNT110088.353Echinops_telfairi
MGP_CAROLIEiJ_G0028698Trnt18867.917ENSEBUG00000012779-9562.035Eptatretus_burgeri
MGP_CAROLIEiJ_G0028698Trnt110091.244ENSEASG00005003577TRNT110091.244Equus_asinus_asinus
MGP_CAROLIEiJ_G0028698Trnt110091.475ENSECAG00000014420TRNT110091.475Equus_caballus
MGP_CAROLIEiJ_G0028698Trnt19988.837ENSEEUG00000009567TRNT19988.837Erinaceus_europaeus
MGP_CAROLIEiJ_G0028698Trnt19770.566ENSELUG00000003802trnt19967.749Esox_lucius
MGP_CAROLIEiJ_G0028698Trnt110090.323ENSFCAG00000026805TRNT19990.323Felis_catus
MGP_CAROLIEiJ_G0028698Trnt18974.805ENSFALG00000013539TRNT110074.805Ficedula_albicollis
MGP_CAROLIEiJ_G0028698Trnt19993.240ENSFDAG00000018412TRNT19993.240Fukomys_damarensis
MGP_CAROLIEiJ_G0028698Trnt19373.745ENSFHEG00000019294trnt19967.612Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028698Trnt19075.410ENSGMOG00000007460trnt19667.568Gadus_morhua
MGP_CAROLIEiJ_G0028698Trnt19673.208ENSGALG00000017368TRNT19672.771Gallus_gallus
MGP_CAROLIEiJ_G0028698Trnt19074.180ENSGAFG00000008647trnt19668.873Gambusia_affinis
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSGACG00000011903trnt19668.325Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028698Trnt19680.288ENSGAGG00000020942TRNT19580.288Gopherus_agassizii
MGP_CAROLIEiJ_G0028698Trnt110092.857ENSGGOG00000015286TRNT110092.857Gorilla_gorilla
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSHBUG00000002797trnt19966.824Haplochromis_burtoni
MGP_CAROLIEiJ_G0028698Trnt19993.240ENSHGLG00000003649TRNT19993.240Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028698Trnt19987.674ENSHGLG00000000221-9987.674Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028698Trnt19992.075ENSHGLG00100016421TRNT19992.075Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSHCOG00000010618trnt19667.892Hippocampus_comes
MGP_CAROLIEiJ_G0028698Trnt19771.212ENSIPUG00000000971trnt19966.512Ictalurus_punctatus
MGP_CAROLIEiJ_G0028698Trnt19792.803ENSSTOG00000000150TRNT19992.647Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028698Trnt19993.721ENSJJAG00000018561Trnt19993.721Jaculus_jaculus
MGP_CAROLIEiJ_G0028698Trnt19373.077ENSKMAG00000011307trnt19967.453Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028698Trnt19174.490ENSLBEG00000019457trnt19463.910Labrus_bergylta
MGP_CAROLIEiJ_G0028698Trnt19279.518ENSLACG00000013227TRNT19673.494Latimeria_chalumnae
MGP_CAROLIEiJ_G0028698Trnt19474.609ENSLOCG00000011105trnt19470.813Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028698Trnt110092.396ENSLAFG00000023191TRNT110092.396Loxodonta_africana
MGP_CAROLIEiJ_G0028698Trnt19993.303ENSMFAG00000045113TRNT19993.303Macaca_fascicularis
MGP_CAROLIEiJ_G0028698Trnt19993.303ENSMMUG00000017983TRNT19993.303Macaca_mulatta
MGP_CAROLIEiJ_G0028698Trnt19993.303ENSMNEG00000037805TRNT19993.303Macaca_nemestrina
MGP_CAROLIEiJ_G0028698Trnt18895.026ENSMLEG00000033671TRNT19995.026Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028698Trnt19673.180ENSMAMG00000023401trnt19968.000Mastacembelus_armatus
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSMZEG00005009141trnt19966.824Maylandia_zebra
MGP_CAROLIEiJ_G0028698Trnt17474.455ENSMGAG00000009971TRNT110074.455Meleagris_gallopavo
MGP_CAROLIEiJ_G0028698Trnt110096.544ENSMAUG00000020707Trnt110096.544Mesocricetus_auratus
MGP_CAROLIEiJ_G0028698Trnt19993.256ENSMICG00000016615TRNT19993.256Microcebus_murinus
MGP_CAROLIEiJ_G0028698Trnt110095.622ENSMOCG00000004539Trnt110095.622Microtus_ochrogaster
MGP_CAROLIEiJ_G0028698Trnt19274.297ENSMMOG00000010742trnt19768.039Mola_mola
MGP_CAROLIEiJ_G0028698Trnt19983.721ENSMODG00000004368TRNT19983.721Monodelphis_domestica
MGP_CAROLIEiJ_G0028698Trnt19670.115ENSMALG00000008376trnt19965.647Monopterus_albus
MGP_CAROLIEiJ_G0028698Trnt1100100.000ENSMUSG00000013736Trnt1100100.000Mus_musculus
MGP_CAROLIEiJ_G0028698Trnt110098.618MGP_PahariEiJ_G0022449Trnt110098.618Mus_pahari
MGP_CAROLIEiJ_G0028698Trnt1100100.000MGP_SPRETEiJ_G0029726Trnt1100100.000Mus_spretus
MGP_CAROLIEiJ_G0028698Trnt110091.475ENSMPUG00000017017TRNT19991.475Mustela_putorius_furo
MGP_CAROLIEiJ_G0028698Trnt18988.342ENSMLUG00000011864TRNT110088.342Myotis_lucifugus
MGP_CAROLIEiJ_G0028698Trnt19994.419ENSNGAG00000000537Trnt19994.419Nannospalax_galili
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSNBRG00000023606trnt19966.377Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028698Trnt110093.318ENSNLEG00000003226TRNT110093.318Nomascus_leucogenys
MGP_CAROLIEiJ_G0028698Trnt19983.488ENSMEUG00000004684TRNT19983.488Notamacropus_eugenii
MGP_CAROLIEiJ_G0028698Trnt18880.679ENSOPRG00000015067TRNT19980.679Ochotona_princeps
MGP_CAROLIEiJ_G0028698Trnt19991.455ENSODEG00000007597TRNT19991.455Octodon_degus
MGP_CAROLIEiJ_G0028698Trnt19672.414ENSONIG00000020273trnt19867.059Oreochromis_niloticus
MGP_CAROLIEiJ_G0028698Trnt19973.832ENSOANG00000007514TRNT19973.832Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028698Trnt110085.945ENSOCUG00000008580TRNT19985.945Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028698Trnt19372.549ENSORLG00000003165trnt19965.871Oryzias_latipes
MGP_CAROLIEiJ_G0028698Trnt19372.941ENSORLG00020022060trnt19966.348Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028698Trnt19370.385ENSORLG00015018915trnt19964.623Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028698Trnt19177.041ENSOMEG00000003331trnt19964.235Oryzias_melastigma
MGP_CAROLIEiJ_G0028698Trnt110091.244ENSOARG00000008631TRNT19991.244Ovis_aries
MGP_CAROLIEiJ_G0028698Trnt110092.857ENSPPAG00000043566TRNT110092.857Pan_paniscus
MGP_CAROLIEiJ_G0028698Trnt19990.993ENSPPRG00000001327TRNT19990.993Panthera_pardus
MGP_CAROLIEiJ_G0028698Trnt110090.783ENSPTIG00000011448TRNT19990.783Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028698Trnt110092.857ENSPTRG00000014564TRNT110092.857Pan_troglodytes
MGP_CAROLIEiJ_G0028698Trnt19993.072ENSPANG00000025944TRNT19993.072Papio_anubis
MGP_CAROLIEiJ_G0028698Trnt19672.348ENSPKIG00000020015trnt19969.070Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028698Trnt19180.101ENSPSIG00000017356TRNT19981.667Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028698Trnt19670.881ENSPMGG00000008888trnt19866.353Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028698Trnt110098.157ENSPEMG00000019845Trnt110098.157Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028698Trnt110083.871ENSPCIG00000030436TRNT110083.871Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSPFOG00000006194trnt19668.873Poecilia_formosa
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSPLAG00000015623trnt19968.734Poecilia_latipinna
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSPMEG00000012216trnt19968.734Poecilia_mexicana
MGP_CAROLIEiJ_G0028698Trnt19073.577ENSPREG00000021470trnt19668.780Poecilia_reticulata
MGP_CAROLIEiJ_G0028698Trnt110093.548ENSPPYG00000013702TRNT110093.548Pongo_abelii
MGP_CAROLIEiJ_G0028698Trnt18891.906ENSPCAG00000001951TRNT110091.906Procavia_capensis
MGP_CAROLIEiJ_G0028698Trnt110092.627ENSPCOG00000022228TRNT110092.627Propithecus_coquereli
MGP_CAROLIEiJ_G0028698Trnt18891.146ENSPVAG00000008784TRNT110091.146Pteropus_vampyrus
MGP_CAROLIEiJ_G0028698Trnt19671.648ENSPNYG00000003120trnt19966.824Pundamilia_nyererei
MGP_CAROLIEiJ_G0028698Trnt19075.820ENSPNAG00000000565trnt19768.246Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028698Trnt110097.235ENSRNOG00000006432Trnt110097.235Rattus_norvegicus
MGP_CAROLIEiJ_G0028698Trnt19992.537ENSRBIG00000042632TRNT110090.553Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028698Trnt110092.857ENSRROG00000036866TRNT110092.857Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028698Trnt110092.627ENSSBOG00000021208TRNT110092.627Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028698Trnt19983.488ENSSHAG00000018861TRNT19983.488Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028698Trnt19471.499ENSSFOG00015020844trnt19471.499Scleropages_formosus
MGP_CAROLIEiJ_G0028698Trnt19672.414ENSSMAG00000015432trnt19766.824Scophthalmus_maximus
MGP_CAROLIEiJ_G0028698Trnt19175.510ENSSDUG00000012320trnt19966.118Seriola_dumerili
MGP_CAROLIEiJ_G0028698Trnt19175.510ENSSLDG00000009325trnt19966.118Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028698Trnt15872.152ENSSLDG00000016463-9163.180Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028698Trnt18880.729ENSSPUG00000014153TRNT110080.729Sphenodon_punctatus
MGP_CAROLIEiJ_G0028698Trnt19670.881ENSSPAG00000021005trnt19966.353Stegastes_partitus
MGP_CAROLIEiJ_G0028698Trnt110091.244ENSSSCG00000011529TRNT110091.244Sus_scrofa
MGP_CAROLIEiJ_G0028698Trnt19374.321ENSTGUG00000010192TRNT19974.321Taeniopygia_guttata
MGP_CAROLIEiJ_G0028698Trnt19075.820ENSTRUG00000001088trnt19669.118Takifugu_rubripes
MGP_CAROLIEiJ_G0028698Trnt19076.639ENSTNIG00000007363trnt19469.118Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028698Trnt110086.567ENSTBEG00000006367TRNT110070.345Tupaia_belangeri
MGP_CAROLIEiJ_G0028698Trnt110091.705ENSTTRG00000007803TRNT110091.705Tursiops_truncatus
MGP_CAROLIEiJ_G0028698Trnt110090.553ENSUAMG00000022574TRNT19990.553Ursus_americanus
MGP_CAROLIEiJ_G0028698Trnt110090.783ENSUMAG00000024092TRNT19990.783Ursus_maritimus
MGP_CAROLIEiJ_G0028698Trnt15692.810ENSVPAG00000008096-6892.810Vicugna_pacos
MGP_CAROLIEiJ_G0028698Trnt110090.323ENSVVUG00000012810TRNT19990.323Vulpes_vulpes
MGP_CAROLIEiJ_G0028698Trnt19668.797ENSXETG00000025091trnt19967.164Xenopus_tropicalis
MGP_CAROLIEiJ_G0028698Trnt19074.590ENSXCOG00000010150trnt19668.627Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028698Trnt19073.770ENSXMAG00000002227trnt19668.137Xiphophorus_maculatus

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