EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028712 (Gene tree)
Gene ID: 110296281
Gene Symbol: Rad18
Alias: 2810024C04Rik
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 73679 bases
Position: chr6:107699417-107773095
Accession: 110296281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0075318	SAP	PF02037.27	5.8e-12	1	1
MGP_CAROLIEiJ_P0075316	SAP	PF02037.27	6.1e-12	1	1
MGP_CAROLIEiJ_P0075317	SAP	PF02037.27	6.9e-12	1	1
MGP_CAROLIEiJ_P0075319	SAP	PF02037.27	7.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0075318	-	2126	-	MGP_CAROLIEiJ_P0075318	433 (aa)	-	-
MGP_CAROLIEiJ_T0075319	-	2459	XM_021164894	MGP_CAROLIEiJ_P0075319	525 (aa)	XP_021020553	UPI000A319397
MGP_CAROLIEiJ_T0075316	-	2210	-	MGP_CAROLIEiJ_P0075316	454 (aa)	-	-
MGP_CAROLIEiJ_T0075317	-	2381	XM_021164896	MGP_CAROLIEiJ_P0075317	499 (aa)	XP_021020555	UPI000A314EF1
MGP_CAROLIEiJ_T0075323	-	2013	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075322	-	1402	-	MGP_CAROLIEiJ_P0075322	314 (aa)	-	-
MGP_CAROLIEiJ_T0075321	-	3437	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075320	-	616	-	MGP_CAROLIEiJ_P0075320	205 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0028712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028712	Rad18	100	75.556	ENSG00000070950	RAD18	98	91.011	Homo_sapiens
MGP_CAROLIEiJ_G0028712	Rad18	98	43.620	ENSAPOG00000005260	rad18	84	42.280	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028712	Rad18	100	75.833	ENSAMEG00000012375	RAD18	100	65.739	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028712	Rad18	98	40.719	ENSACIG00000020655	rad18	95	39.655	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028712	Rad18	98	44.575	ENSAOCG00000004507	rad18	86	43.059	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028712	Rad18	98	44.118	ENSAPEG00000016837	rad18	94	42.459	Amphiprion_percula
MGP_CAROLIEiJ_G0028712	Rad18	90	55.088	ENSAPLG00000003138	RAD18	91	48.848	Anas_platyrhynchos
MGP_CAROLIEiJ_G0028712	Rad18	100	74.308	ENSANAG00000033360	RAD18	100	74.308	Aotus_nancymaae
MGP_CAROLIEiJ_G0028712	Rad18	98	43.363	ENSACLG00000023506	rad18	84	44.030	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028712	Rad18	96	46.667	ENSAMXG00000002534	rad18	96	40.426	Astyanax_mexicanus
MGP_CAROLIEiJ_G0028712	Rad18	100	75.325	ENSBTAG00000012142	RAD18	99	77.011	Bos_taurus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.320	ENSCJAG00000040303	RAD18	100	73.320	Callithrix_jacchus
MGP_CAROLIEiJ_G0028712	Rad18	100	71.709	ENSCAFG00000005548	RAD18	100	71.709	Canis_familiaris
MGP_CAROLIEiJ_G0028712	Rad18	100	71.709	ENSCAFG00020009228	RAD18	100	71.709	Canis_lupus_dingo
MGP_CAROLIEiJ_G0028712	Rad18	100	75.325	ENSCHIG00000007965	RAD18	100	75.325	Capra_hircus
MGP_CAROLIEiJ_G0028712	Rad18	100	72.495	ENSTSYG00000012189	RAD18	100	72.495	Carlito_syrichta
MGP_CAROLIEiJ_G0028712	Rad18	95	69.266	ENSCAPG00000000356	RAD18	99	70.336	Cavia_aperea
MGP_CAROLIEiJ_G0028712	Rad18	100	72.255	ENSCPOG00000013890	RAD18	100	72.255	Cavia_porcellus
MGP_CAROLIEiJ_G0028712	Rad18	100	74.506	ENSCCAG00000022920	RAD18	100	74.506	Cebus_capucinus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.913	ENSCATG00000039277	RAD18	100	73.913	Cercocebus_atys
MGP_CAROLIEiJ_G0028712	Rad18	100	72.817	ENSCLAG00000003652	RAD18	100	72.817	Chinchilla_lanigera
MGP_CAROLIEiJ_G0028712	Rad18	100	73.386	ENSCSAG00000010783	RAD18	100	73.386	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028712	Rad18	97	59.547	ENSCPBG00000014787	RAD18	99	51.575	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028712	Rad18	100	73.767	ENSCANG00000007308	RAD18	100	73.767	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028712	Rad18	100	88.791	ENSCGRG00001018154	-	100	88.791	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028712	Rad18	100	82.903	ENSCGRG00001010209	-	100	82.903	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028712	Rad18	100	88.791	ENSCGRG00000007283	-	100	88.791	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028712	Rad18	100	83.101	ENSCGRG00000019636	-	100	83.101	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028712	Rad18	98	45.955	ENSCSEG00000002516	rad18	78	46.429	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028712	Rad18	98	46.667	ENSDARG00000027938	rad18	87	45.128	Danio_rerio
MGP_CAROLIEiJ_G0028712	Rad18	98	77.023	ENSDNOG00000040055	RAD18	100	73.767	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028712	Rad18	100	76.026	ENSDORG00000001099	Rad18	100	76.242	Dipodomys_ordii
MGP_CAROLIEiJ_G0028712	Rad18	98	54.045	ENSETEG00000002268	RAD18	97	57.895	Echinops_telfairi
MGP_CAROLIEiJ_G0028712	Rad18	100	76.134	ENSEASG00005013316	RAD18	94	75.542	Equus_asinus_asinus
MGP_CAROLIEiJ_G0028712	Rad18	100	76.134	ENSECAG00000010746	RAD18	94	75.542	Equus_caballus
MGP_CAROLIEiJ_G0028712	Rad18	98	64.286	ENSEEUG00000000236	-	73	66.361	Erinaceus_europaeus
MGP_CAROLIEiJ_G0028712	Rad18	95	43.519	ENSELUG00000000733	rad18	82	41.235	Esox_lucius
MGP_CAROLIEiJ_G0028712	Rad18	100	73.570	ENSFCAG00000025747	RAD18	100	73.570	Felis_catus
MGP_CAROLIEiJ_G0028712	Rad18	95	56.250	ENSFALG00000013625	RAD18	88	51.724	Ficedula_albicollis
MGP_CAROLIEiJ_G0028712	Rad18	98	75.405	ENSFDAG00000009907	RAD18	100	71.937	Fukomys_damarensis
MGP_CAROLIEiJ_G0028712	Rad18	97	55.031	ENSGALG00000008368	RAD18	80	53.500	Gallus_gallus
MGP_CAROLIEiJ_G0028712	Rad18	98	43.614	ENSGACG00000000920	rad18	80	44.444	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028712	Rad18	87	59.420	ENSGAGG00000005184	RAD18	100	50.105	Gopherus_agassizii
MGP_CAROLIEiJ_G0028712	Rad18	100	74.308	ENSGGOG00000008391	RAD18	100	74.308	Gorilla_gorilla
MGP_CAROLIEiJ_G0028712	Rad18	84	44.867	ENSHBUG00000013322	rad18	83	45.399	Haplochromis_burtoni
MGP_CAROLIEiJ_G0028712	Rad18	100	78.095	ENSHGLG00000009196	-	99	78.095	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028712	Rad18	100	78.095	ENSHGLG00100017675	-	99	78.095	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028712	Rad18	97	44.194	ENSIPUG00000018681	rad18	89	39.855	Ictalurus_punctatus
MGP_CAROLIEiJ_G0028712	Rad18	100	76.508	ENSSTOG00000004870	-	99	76.508	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028712	Rad18	100	79.869	ENSJJAG00000001484	Rad18	100	79.869	Jaculus_jaculus
MGP_CAROLIEiJ_G0028712	Rad18	96	43.827	ENSKMAG00000020725	rad18	82	43.341	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028712	Rad18	92	52.961	ENSLACG00000018437	RAD18	96	52.288	Latimeria_chalumnae
MGP_CAROLIEiJ_G0028712	Rad18	98	47.588	ENSLOCG00000010629	rad18	86	47.150	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028712	Rad18	98	70.192	ENSLAFG00000004667	RAD18	97	64.780	Loxodonta_africana
MGP_CAROLIEiJ_G0028712	Rad18	100	73.913	ENSMFAG00000028864	RAD18	100	73.913	Macaca_fascicularis
MGP_CAROLIEiJ_G0028712	Rad18	100	75.556	ENSMMUG00000020013	RAD18	99	75.556	Macaca_mulatta
MGP_CAROLIEiJ_G0028712	Rad18	100	73.913	ENSMNEG00000013464	RAD18	100	73.913	Macaca_nemestrina
MGP_CAROLIEiJ_G0028712	Rad18	100	73.715	ENSMLEG00000014306	RAD18	100	73.715	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028712	Rad18	86	39.145	ENSMAMG00000023936	rad18	81	40.104	Mastacembelus_armatus
MGP_CAROLIEiJ_G0028712	Rad18	98	43.363	ENSMZEG00005010577	rad18	73	44.030	Maylandia_zebra
MGP_CAROLIEiJ_G0028712	Rad18	90	56.842	ENSMGAG00000010131	RAD18	91	49.886	Meleagris_gallopavo
MGP_CAROLIEiJ_G0028712	Rad18	100	87.692	ENSMAUG00000020642	Rad18	99	89.080	Mesocricetus_auratus
MGP_CAROLIEiJ_G0028712	Rad18	98	73.535	ENSMICG00000013536	RAD18	99	73.535	Microcebus_murinus
MGP_CAROLIEiJ_G0028712	Rad18	100	87.253	ENSMOCG00000009114	Rad18	100	87.253	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028712	Rad18	100	41.092	ENSMMOG00000021793	rad18	98	41.927	Mola_mola
MGP_CAROLIEiJ_G0028712	Rad18	98	62.821	ENSMODG00000004679	RAD18	88	58.065	Monodelphis_domestica
MGP_CAROLIEiJ_G0028712	Rad18	100	94.603	ENSMUSG00000030254	Rad18	100	94.603	Mus_musculus
MGP_CAROLIEiJ_G0028712	Rad18	99	97.170	MGP_PahariEiJ_G0022463	Rad18	99	97.170	Mus_pahari
MGP_CAROLIEiJ_G0028712	Rad18	100	95.556	MGP_SPRETEiJ_G0029740	Rad18	100	95.556	Mus_spretus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.964	ENSMPUG00000017063	RAD18	100	73.964	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028712	Rad18	100	70.349	ENSMLUG00000016494	RAD18	100	70.349	Myotis_lucifugus
MGP_CAROLIEiJ_G0028712	Rad18	100	83.114	ENSNGAG00000012464	Rad18	100	84.438	Nannospalax_galili
MGP_CAROLIEiJ_G0028712	Rad18	98	39.701	ENSNBRG00000004794	rad18	97	41.005	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028712	Rad18	100	74.455	ENSNLEG00000003789	RAD18	100	74.455	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028712	Rad18	82	59.470	ENSMEUG00000003444	-	82	49.858	Notamacropus_eugenii
MGP_CAROLIEiJ_G0028712	Rad18	98	70.874	ENSOPRG00000013856	RAD18	100	66.996	Ochotona_princeps
MGP_CAROLIEiJ_G0028712	Rad18	96	76.238	ENSODEG00000018158	RAD18	97	76.238	Octodon_degus
MGP_CAROLIEiJ_G0028712	Rad18	98	44.839	ENSONIG00000018979	rad18	84	45.040	Oreochromis_niloticus
MGP_CAROLIEiJ_G0028712	Rad18	98	72.492	ENSOCUG00000000013	RAD18	100	70.414	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028712	Rad18	96	38.838	ENSORLG00000029026	rad18	96	40.541	Oryzias_latipes
MGP_CAROLIEiJ_G0028712	Rad18	98	75.962	ENSOGAG00000001410	RAD18	100	73.725	Otolemur_garnettii
MGP_CAROLIEiJ_G0028712	Rad18	100	72.852	ENSOARG00000007445	RAD18	100	72.852	Ovis_aries
MGP_CAROLIEiJ_G0028712	Rad18	100	74.506	ENSPPAG00000035797	RAD18	100	74.506	Pan_paniscus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.373	ENSPPRG00000004021	RAD18	100	73.373	Panthera_pardus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.373	ENSPTIG00000008602	RAD18	100	73.373	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028712	Rad18	100	74.111	ENSPTRG00000014583	RAD18	100	74.111	Pan_troglodytes
MGP_CAROLIEiJ_G0028712	Rad18	100	73.715	ENSPANG00000008855	RAD18	100	73.715	Papio_anubis
MGP_CAROLIEiJ_G0028712	Rad18	97	59.223	ENSPSIG00000006928	RAD18	99	51.098	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028712	Rad18	98	44.268	ENSPMGG00000013294	rad18	95	41.724	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028712	Rad18	100	87.033	ENSPEMG00000022129	Rad18	99	89.080	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028712	Rad18	96	63.023	ENSPCIG00000024872	RAD18	92	59.773	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028712	Rad18	96	42.813	ENSPFOG00000002722	rad18	96	44.536	Poecilia_formosa
MGP_CAROLIEiJ_G0028712	Rad18	100	74.308	ENSPPYG00000013688	RAD18	100	74.308	Pongo_abelii
MGP_CAROLIEiJ_G0028712	Rad18	96	60.855	ENSPCAG00000008229	RAD18	100	59.408	Procavia_capensis
MGP_CAROLIEiJ_G0028712	Rad18	100	73.413	ENSPVAG00000012220	RAD18	100	73.413	Pteropus_vampyrus
MGP_CAROLIEiJ_G0028712	Rad18	98	43.363	ENSPNYG00000006815	rad18	78	44.030	Pundamilia_nyererei
MGP_CAROLIEiJ_G0028712	Rad18	98	42.943	ENSPNAG00000016082	rad18	99	38.723	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028712	Rad18	100	91.200	ENSRNOG00000005907	Rad18	100	91.600	Rattus_norvegicus
MGP_CAROLIEiJ_G0028712	Rad18	100	72.584	ENSRBIG00000044173	RAD18	100	72.584	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028712	Rad18	100	74.308	ENSRROG00000043948	RAD18	100	74.308	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028712	Rad18	100	74.111	ENSSBOG00000008434	-	100	74.111	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028712	Rad18	96	55.229	ENSSHAG00000012472	-	99	55.528	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028712	Rad18	98	46.474	ENSSFOG00015019264	rad18	76	46.301	Scleropages_formosus
MGP_CAROLIEiJ_G0028712	Rad18	96	58.065	ENSSPUG00000017486	RAD18	97	58.065	Sphenodon_punctatus
MGP_CAROLIEiJ_G0028712	Rad18	98	42.353	ENSSPAG00000007165	rad18	79	43.176	Stegastes_partitus
MGP_CAROLIEiJ_G0028712	Rad18	100	72.638	ENSSSCG00000026158	RAD18	100	72.638	Sus_scrofa
MGP_CAROLIEiJ_G0028712	Rad18	92	54.392	ENSTGUG00000010405	RAD18	83	53.175	Taeniopygia_guttata
MGP_CAROLIEiJ_G0028712	Rad18	95	42.903	ENSTRUG00000003517	rad18	97	43.333	Takifugu_rubripes
MGP_CAROLIEiJ_G0028712	Rad18	98	46.032	ENSTNIG00000014625	rad18	100	45.822	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028712	Rad18	100	74.405	ENSTTRG00000005034	RAD18	100	74.405	Tursiops_truncatus
MGP_CAROLIEiJ_G0028712	Rad18	91	58.042	ENSUAMG00000009763	-	84	57.439	Ursus_americanus
MGP_CAROLIEiJ_G0028712	Rad18	100	73.767	ENSUMAG00000019279	RAD18	100	73.767	Ursus_maritimus
MGP_CAROLIEiJ_G0028712	Rad18	96	75.166	ENSVPAG00000002063	RAD18	100	68.790	Vicugna_pacos
MGP_CAROLIEiJ_G0028712	Rad18	100	71.709	ENSVVUG00000025318	RAD18	100	71.709	Vulpes_vulpes
MGP_CAROLIEiJ_G0028712	Rad18	96	51.634	ENSXETG00000033878	RAD18	99	51.813	Xenopus_tropicalis
MGP_CAROLIEiJ_G0028712	Rad18	96	38.037	ENSXCOG00000020018	rad18	94	40.054	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028712	Rad18	96	38.344	ENSXMAG00000001516	rad18	94	40.327	Xiphophorus_maculatus