EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028714 (Gene tree)
Gene ID: 110295745
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 22937 bases
Position: chr6:108125047-108147983
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0075328	THUMP	PF02926.17	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0075334	-	732	-	MGP_CAROLIEiJ_P0075334	85 (aa)	-	-
MGP_CAROLIEiJ_T0075335	-	646	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075336	-	2863	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075337	-	688	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075330	-	1774	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075331	-	572	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075332	-	611	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075333	-	368	-	MGP_CAROLIEiJ_P0075333	76 (aa)	-	-
MGP_CAROLIEiJ_T0075329	-	869	-	MGP_CAROLIEiJ_P0075329	220 (aa)	-	-
MGP_CAROLIEiJ_T0075328	-	2110	-	MGP_CAROLIEiJ_P0075328	480 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0028714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSG00000134077	THUMPD3	100	73.387	Homo_sapiens
MGP_CAROLIEiJ_G0028714	-	58	57.554	ENSAPOG00000015836	thumpd3	54	57.554	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028714	-	65	78.025	ENSAMEG00000011321	THUMPD3	62	78.025	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028714	-	58	54.676	ENSACIG00000020096	thumpd3	53	54.676	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028714	-	58	56.786	ENSAOCG00000004399	thumpd3	53	56.786	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028714	-	58	56.429	ENSAPEG00000016740	thumpd3	53	56.429	Amphiprion_percula
MGP_CAROLIEiJ_G0028714	-	58	56.786	ENSATEG00000005345	thumpd3	55	56.786	Anabas_testudineus
MGP_CAROLIEiJ_G0028714	-	60	58.442	ENSACAG00000014974	THUMPD3	58	57.468	Anolis_carolinensis
MGP_CAROLIEiJ_G0028714	-	65	74.841	ENSANAG00000002365	THUMPD3	62	74.841	Aotus_nancymaae
MGP_CAROLIEiJ_G0028714	-	58	54.286	ENSACLG00000023333	thumpd3	53	53.571	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028714	-	51	40.650	ENSACLG00000013504	-	53	40.254	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028714	-	58	56.159	ENSAMXG00000015683	thumpd3	55	56.159	Astyanax_mexicanus
MGP_CAROLIEiJ_G0028714	-	65	77.707	ENSBTAG00000003112	THUMPD3	62	77.707	Bos_taurus
MGP_CAROLIEiJ_G0028714	-	58	32.014	WBGene00010846	M04B2.2	57	32.014	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSCJAG00000015949	THUMPD3	62	75.796	Callithrix_jacchus
MGP_CAROLIEiJ_G0028714	-	65	76.752	ENSCAFG00000005499	THUMPD3	62	76.752	Canis_familiaris
MGP_CAROLIEiJ_G0028714	-	65	76.752	ENSCAFG00020008895	-	62	76.752	Canis_lupus_dingo
MGP_CAROLIEiJ_G0028714	-	65	77.707	ENSCHIG00000024037	THUMPD3	62	77.707	Capra_hircus
MGP_CAROLIEiJ_G0028714	-	65	76.433	ENSTSYG00000000159	THUMPD3	62	76.433	Carlito_syrichta
MGP_CAROLIEiJ_G0028714	-	56	50.545	ENSCAPG00000017486	THUMPD3	57	50.545	Cavia_aperea
MGP_CAROLIEiJ_G0028714	-	65	73.968	ENSCPOG00000033287	THUMPD3	62	73.968	Cavia_porcellus
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSCCAG00000027067	-	62	75.796	Cebus_capucinus
MGP_CAROLIEiJ_G0028714	-	65	71.019	ENSCCAG00000021429	-	66	71.019	Cebus_capucinus
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSCATG00000040999	THUMPD3	62	75.796	Cercocebus_atys
MGP_CAROLIEiJ_G0028714	-	65	76.190	ENSCLAG00000000690	THUMPD3	62	76.190	Chinchilla_lanigera
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSCSAG00000010753	THUMPD3	62	76.115	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028714	-	64	57.468	ENSCHOG00000012851	THUMPD3	56	57.468	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028714	-	65	59.459	ENSCPBG00000014771	THUMPD3	64	59.821	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028714	-	58	36.620	ENSCSAVG00000008668	-	58	36.620	Ciona_savignyi
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSCANG00000031901	THUMPD3	62	75.796	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028714	-	65	86.624	ENSCGRG00001024117	Thumpd3	62	86.624	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028714	-	65	86.624	ENSCGRG00000018116	Thumpd3	62	86.624	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028714	-	59	52.817	ENSCSEG00000002546	thumpd3	59	49.667	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028714	-	58	57.500	ENSCVAG00000001019	thumpd3	52	57.500	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028714	-	58	56.890	ENSDARG00000059634	thumpd3	56	56.890	Danio_rerio
MGP_CAROLIEiJ_G0028714	-	65	78.095	ENSDNOG00000047668	THUMPD3	75	78.095	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028714	-	65	76.190	ENSDORG00000003257	Thumpd3	63	76.190	Dipodomys_ordii
MGP_CAROLIEiJ_G0028714	-	65	72.698	ENSETEG00000020239	-	62	72.698	Echinops_telfairi
MGP_CAROLIEiJ_G0028714	-	55	48.327	ENSEBUG00000004221	thumpd3	57	47.955	Eptatretus_burgeri
MGP_CAROLIEiJ_G0028714	-	63	77.741	ENSEASG00005013327	THUMPD3	60	77.741	Equus_asinus_asinus
MGP_CAROLIEiJ_G0028714	-	65	78.025	ENSECAG00000002016	THUMPD3	62	78.025	Equus_caballus
MGP_CAROLIEiJ_G0028714	-	65	72.524	ENSEEUG00000014696	THUMPD3	62	72.524	Erinaceus_europaeus
MGP_CAROLIEiJ_G0028714	-	65	78.981	ENSFCAG00000006171	THUMPD3	62	78.981	Felis_catus
MGP_CAROLIEiJ_G0028714	-	58	56.333	ENSFALG00000013631	THUMPD3	60	58.249	Ficedula_albicollis
MGP_CAROLIEiJ_G0028714	-	65	76.508	ENSFDAG00000014825	THUMPD3	62	76.508	Fukomys_damarensis
MGP_CAROLIEiJ_G0028714	-	61	52.333	ENSFHEG00000006006	thumpd3	57	53.691	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028714	-	63	53.642	ENSGMOG00000007923	thumpd3	58	53.642	Gadus_morhua
MGP_CAROLIEiJ_G0028714	-	60	59.211	ENSGALG00000044813	THUMPD3	61	59.211	Gallus_gallus
MGP_CAROLIEiJ_G0028714	-	58	57.143	ENSGAFG00000021645	thumpd3	53	57.143	Gambusia_affinis
MGP_CAROLIEiJ_G0028714	-	59	52.613	ENSGACG00000000930	thumpd3	57	52.613	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028714	-	65	60.714	ENSGAGG00000022750	THUMPD3	64	60.714	Gopherus_agassizii
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSGGOG00000000604	THUMPD3	62	75.796	Gorilla_gorilla
MGP_CAROLIEiJ_G0028714	-	58	54.643	ENSHBUG00000013405	thumpd3	53	55.516	Haplochromis_burtoni
MGP_CAROLIEiJ_G0028714	-	65	75.556	ENSHGLG00000016200	THUMPD3	62	75.556	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028714	-	65	76.190	ENSHGLG00100017321	-	62	76.190	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028714	-	69	70.606	ENSHGLG00100000505	-	74	70.606	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028714	-	61	53.401	ENSHCOG00000004871	thumpd3	58	54.762	Hippocampus_comes
MGP_CAROLIEiJ_G0028714	-	58	55.674	ENSIPUG00000019415	THUMPD3	54	52.797	Ictalurus_punctatus
MGP_CAROLIEiJ_G0028714	-	65	78.344	ENSSTOG00000003973	THUMPD3	62	78.344	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028714	-	65	76.752	ENSJJAG00000017751	Thumpd3	67	76.752	Jaculus_jaculus
MGP_CAROLIEiJ_G0028714	-	60	53.448	ENSKMAG00000021025	thumpd3	51	54.138	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0028714	-	58	53.571	ENSLBEG00000012252	thumpd3	53	52.500	Labrus_bergylta
MGP_CAROLIEiJ_G0028714	-	60	56.271	ENSLACG00000018604	THUMPD3	57	56.610	Latimeria_chalumnae
MGP_CAROLIEiJ_G0028714	-	58	56.610	ENSLOCG00000009800	thumpd3	59	54.949	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028714	-	65	76.508	ENSLAFG00000005103	THUMPD3	62	76.508	Loxodonta_africana
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSMFAG00000044884	THUMPD3	62	76.115	Macaca_fascicularis
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSMMUG00000017307	THUMPD3	62	76.115	Macaca_mulatta
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSMNEG00000030529	THUMPD3	62	76.115	Macaca_nemestrina
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSMLEG00000032943	THUMPD3	62	75.796	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028714	-	59	52.982	ENSMAMG00000023934	thumpd3	54	52.249	Mastacembelus_armatus
MGP_CAROLIEiJ_G0028714	-	58	54.286	ENSMZEG00005010623	thumpd3	53	53.571	Maylandia_zebra
MGP_CAROLIEiJ_G0028714	-	65	87.898	ENSMAUG00000012250	Thumpd3	62	87.898	Mesocricetus_auratus
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSMICG00000010095	THUMPD3	60	75.796	Microcebus_murinus
MGP_CAROLIEiJ_G0028714	-	65	87.937	ENSMOCG00000020148	Thumpd3	62	87.619	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028714	-	63	51.803	ENSMMOG00000021791	thumpd3	58	51.803	Mola_mola
MGP_CAROLIEiJ_G0028714	-	60	68.562	ENSMODG00000004715	-	63	68.562	Monodelphis_domestica
MGP_CAROLIEiJ_G0028714	-	61	52.542	ENSMALG00000017316	thumpd3	59	52.542	Monopterus_albus
MGP_CAROLIEiJ_G0028714	-	65	97.756	ENSMUSG00000030264	Thumpd3	62	97.756	Mus_musculus
MGP_CAROLIEiJ_G0028714	-	65	94.268	MGP_PahariEiJ_G0022465	Thumpd3	62	94.268	Mus_pahari
MGP_CAROLIEiJ_G0028714	-	65	97.771	MGP_SPRETEiJ_G0029742	Thumpd3	62	97.771	Mus_spretus
MGP_CAROLIEiJ_G0028714	-	65	78.025	ENSMPUG00000017066	-	62	78.025	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028714	-	65	78.065	ENSMPUG00000005219	-	67	78.065	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028714	-	65	76.752	ENSMLUG00000008538	THUMPD3	61	76.752	Myotis_lucifugus
MGP_CAROLIEiJ_G0028714	-	65	82.166	ENSNGAG00000021014	-	62	82.166	Nannospalax_galili
MGP_CAROLIEiJ_G0028714	-	65	66.879	ENSNGAG00000001549	-	64	66.879	Nannospalax_galili
MGP_CAROLIEiJ_G0028714	-	58	54.286	ENSNBRG00000004886	thumpd3	53	54.286	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0028714	-	65	76.433	ENSNLEG00000003863	THUMPD3	62	76.433	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028714	-	58	54.643	ENSONIG00000018977	thumpd3	56	53.041	Oreochromis_niloticus
MGP_CAROLIEiJ_G0028714	-	65	75.478	ENSOCUG00000010921	THUMPD3	66	75.478	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028714	-	61	54.422	ENSORLG00000000676	thumpd3	55	54.422	Oryzias_latipes
MGP_CAROLIEiJ_G0028714	-	61	53.872	ENSORLG00020007509	thumpd3	57	53.872	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028714	-	61	54.762	ENSORLG00015003615	thumpd3	55	54.762	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028714	-	63	52.288	ENSOMEG00000014115	thumpd3	58	52.104	Oryzias_melastigma
MGP_CAROLIEiJ_G0028714	-	65	77.707	ENSOARG00000007139	THUMPD3	61	77.707	Ovis_aries
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSPPAG00000025852	THUMPD3	62	76.115	Pan_paniscus
MGP_CAROLIEiJ_G0028714	-	65	79.299	ENSPPRG00000008071	THUMPD3	62	79.299	Panthera_pardus
MGP_CAROLIEiJ_G0028714	-	65	78.662	ENSPTIG00000017923	THUMPD3	62	78.662	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028714	-	65	76.433	ENSPTRG00000014585	THUMPD3	62	76.433	Pan_troglodytes
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSPANG00000016253	THUMPD3	62	76.115	Papio_anubis
MGP_CAROLIEiJ_G0028714	-	59	57.951	ENSPKIG00000014009	thumpd3	56	57.951	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028714	-	65	60.736	ENSPSIG00000007370	THUMPD3	64	60.736	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028714	-	58	56.272	ENSPMGG00000017563	thumpd3	55	56.272	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0028714	-	65	87.261	ENSPEMG00000022411	Thumpd3	62	87.261	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028714	-	59	52.595	ENSPMAG00000001291	thumpd3	62	52.595	Petromyzon_marinus
MGP_CAROLIEiJ_G0028714	-	65	64.832	ENSPCIG00000002049	THUMPD3	63	64.832	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028714	-	58	56.429	ENSPFOG00000002318	thumpd3	53	54.138	Poecilia_formosa
MGP_CAROLIEiJ_G0028714	-	59	55.830	ENSPLAG00000014804	thumpd3	53	54.138	Poecilia_latipinna
MGP_CAROLIEiJ_G0028714	-	59	55.830	ENSPMEG00000000582	thumpd3	53	54.138	Poecilia_mexicana
MGP_CAROLIEiJ_G0028714	-	58	56.429	ENSPREG00000009176	thumpd3	53	56.786	Poecilia_reticulata
MGP_CAROLIEiJ_G0028714	-	65	76.433	ENSPPYG00000029461	THUMPD3	62	76.433	Pongo_abelii
MGP_CAROLIEiJ_G0028714	-	63	54.902	ENSPPYG00000017616	-	62	54.575	Pongo_abelii
MGP_CAROLIEiJ_G0028714	-	65	74.522	ENSPCOG00000023618	-	71	74.522	Propithecus_coquereli
MGP_CAROLIEiJ_G0028714	-	57	74.359	ENSPCOG00000018095	-	57	74.359	Propithecus_coquereli
MGP_CAROLIEiJ_G0028714	-	65	77.070	ENSPVAG00000008721	THUMPD3	62	77.070	Pteropus_vampyrus
MGP_CAROLIEiJ_G0028714	-	58	54.286	ENSPNYG00000006918	thumpd3	53	53.571	Pundamilia_nyererei
MGP_CAROLIEiJ_G0028714	-	61	53.559	ENSPNAG00000014936	thumpd3	58	53.559	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028714	-	65	88.854	ENSRNOG00000006941	Thumpd3	62	88.854	Rattus_norvegicus
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSRBIG00000035954	THUMPD3	62	76.115	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028714	-	65	76.115	ENSRROG00000035734	THUMPD3	62	76.115	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028714	-	65	75.796	ENSSBOG00000023567	THUMPD3	65	75.796	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028714	-	65	62.080	ENSSHAG00000014467	THUMPD3	62	62.080	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028714	-	58	58.633	ENSSFOG00015019210	thumpd3	54	58.633	Scleropages_formosus
MGP_CAROLIEiJ_G0028714	-	62	53.398	ENSSMAG00000000609	thumpd3	58	52.258	Scophthalmus_maximus
MGP_CAROLIEiJ_G0028714	-	58	54.643	ENSSDUG00000012179	thumpd3	55	53.957	Seriola_dumerili
MGP_CAROLIEiJ_G0028714	-	58	55.319	ENSSLDG00000022028	thumpd3	53	55.319	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028714	-	56	68.635	ENSSARG00000002239	THUMPD3	53	68.635	Sorex_araneus
MGP_CAROLIEiJ_G0028714	-	65	59.574	ENSSPUG00000017461	THUMPD3	64	59.574	Sphenodon_punctatus
MGP_CAROLIEiJ_G0028714	-	58	55.714	ENSSPAG00000008345	thumpd3	52	56.429	Stegastes_partitus
MGP_CAROLIEiJ_G0028714	-	65	78.025	ENSSSCG00000011542	THUMPD3	62	78.025	Sus_scrofa
MGP_CAROLIEiJ_G0028714	-	57	61.348	ENSTGUG00000010440	THUMPD3	62	61.348	Taeniopygia_guttata
MGP_CAROLIEiJ_G0028714	-	62	43.000	ENSTRUG00000004420	thumpd3	53	41.806	Takifugu_rubripes
MGP_CAROLIEiJ_G0028714	-	58	55.319	ENSTNIG00000014627	thumpd3	56	53.191	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028714	-	65	70.064	ENSTBEG00000003450	THUMPD3	62	70.064	Tupaia_belangeri
MGP_CAROLIEiJ_G0028714	-	65	77.636	ENSTTRG00000009694	THUMPD3	62	77.636	Tursiops_truncatus
MGP_CAROLIEiJ_G0028714	-	65	78.662	ENSUAMG00000009412	THUMPD3	62	78.662	Ursus_americanus
MGP_CAROLIEiJ_G0028714	-	65	73.885	ENSUMAG00000019241	THUMPD3	60	72.611	Ursus_maritimus
MGP_CAROLIEiJ_G0028714	-	65	76.752	ENSVPAG00000002855	THUMPD3	75	76.752	Vicugna_pacos
MGP_CAROLIEiJ_G0028714	-	65	77.389	ENSVVUG00000025278	THUMPD3	62	77.389	Vulpes_vulpes
MGP_CAROLIEiJ_G0028714	-	65	51.205	ENSXETG00000001447	thumpd3	62	53.116	Xenopus_tropicalis
MGP_CAROLIEiJ_G0028714	-	58	56.429	ENSXCOG00000000159	thumpd3	56	56.429	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028714	-	58	56.429	ENSXMAG00000001423	thumpd3	53	56.429	Xiphophorus_maculatus