EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028752 (Gene tree)
Gene ID: 110296518
Gene Symbol: Tsen2
Alias: -
Full Name: tRNA splicing endonuclease subunit 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 39971 bases
Position: chr6:110644797-110684767
Accession: 110296518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0075568	tRNA_int_endo	PF01974.17	7.3e-18	1	1
MGP_CAROLIEiJ_P0075568	tRNA_int_endo_N	PF02778.14	7.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0075569	-	423	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075568	-	2128	-	MGP_CAROLIEiJ_P0075568	463 (aa)	XP_021020885	UPI000A31748B
MGP_CAROLIEiJ_T0075570	-	4511	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075571	-	415	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075567	-	645	-	MGP_CAROLIEiJ_P0075567	103 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0028752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028752's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.789	ENSG00000154743	TSEN2	99	86.250	Homo_sapiens
MGP_CAROLIEiJ_G0028752	Tsen2	63	54.430	ENSAPOG00000019374	-	69	54.430	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.500	ENSAMEG00000004748	TSEN2	100	66.875	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028752	Tsen2	66	59.302	ENSACIG00000022861	tsen2	99	54.023	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028752	Tsen2	66	56.647	ENSAOCG00000007248	tsen2	73	56.647	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028752	Tsen2	68	60.989	ENSAPEG00000021947	tsen2	77	60.989	Amphiprion_percula
MGP_CAROLIEiJ_G0028752	Tsen2	65	62.431	ENSATEG00000009406	tsen2	99	39.785	Anabas_testudineus
MGP_CAROLIEiJ_G0028752	Tsen2	87	52.857	ENSAPLG00000014992	TSEN2	100	52.857	Anas_platyrhynchos
MGP_CAROLIEiJ_G0028752	Tsen2	98	52.916	ENSACAG00000013345	TSEN2	100	53.586	Anolis_carolinensis
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.300	ENSANAG00000026891	TSEN2	100	67.089	Aotus_nancymaae
MGP_CAROLIEiJ_G0028752	Tsen2	68	62.088	ENSACLG00000014303	tsen2	76	62.431	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028752	Tsen2	99	43.200	ENSAMXG00000043484	tsen2	99	43.200	Astyanax_mexicanus
MGP_CAROLIEiJ_G0028752	Tsen2	100	75.758	ENSBTAG00000037980	TSEN2	89	75.758	Bos_taurus
MGP_CAROLIEiJ_G0028752	Tsen2	71	82.960	ENSCJAG00000039013	TSEN2	100	82.511	Callithrix_jacchus
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.736	ENSCAFG00000004987	TSEN2	100	66.736	Canis_familiaris
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.736	ENSCAFG00020007250	TSEN2	100	66.736	Canis_lupus_dingo
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.094	ENSCHIG00000013772	TSEN2	100	65.880	Capra_hircus
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.300	ENSTSYG00000010816	TSEN2	100	67.089	Carlito_syrichta
MGP_CAROLIEiJ_G0028752	Tsen2	100	63.958	ENSCPOG00000007932	-	100	63.542	Cavia_porcellus
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.511	ENSCCAG00000037851	TSEN2	100	67.300	Cebus_capucinus
MGP_CAROLIEiJ_G0028752	Tsen2	100	62.633	ENSCATG00000031911	TSEN2	96	84.530	Cercocebus_atys
MGP_CAROLIEiJ_G0028752	Tsen2	100	62.917	ENSCLAG00000011090	TSEN2	100	62.708	Chinchilla_lanigera
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.605	ENSCSAG00000009822	TSEN2	100	65.393	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028752	Tsen2	75	81.283	ENSCHOG00000009111	TSEN2	74	81.283	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028752	Tsen2	100	53.512	ENSCPBG00000026359	TSEN2	100	47.521	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.085	ENSCANG00000035550	TSEN2	100	67.872	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	88.793	ENSCGRG00001017681	Tsen2	100	87.931	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028752	Tsen2	100	88.793	ENSCGRG00000010015	Tsen2	100	87.931	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028752	Tsen2	99	37.983	ENSCSEG00000020407	tsen2	99	37.983	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.094	ENSDNOG00000038504	TSEN2	100	66.667	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028752	Tsen2	100	63.656	ENSDORG00000003395	Tsen2	100	63.441	Dipodomys_ordii
MGP_CAROLIEiJ_G0028752	Tsen2	75	74.286	ENSETEG00000003098	TSEN2	63	88.587	Echinops_telfairi
MGP_CAROLIEiJ_G0028752	Tsen2	69	54.891	ENSEBUG00000014614	TSEN2	80	54.891	Eptatretus_burgeri
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.143	ENSEASG00005014763	TSEN2	100	67.932	Equus_asinus_asinus
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.354	ENSECAG00000012813	TSEN2	100	68.143	Equus_caballus
MGP_CAROLIEiJ_G0028752	Tsen2	100	43.863	ENSELUG00000013262	tsen2	100	43.863	Esox_lucius
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.443	ENSFCAG00000025500	TSEN2	100	64.795	Felis_catus
MGP_CAROLIEiJ_G0028752	Tsen2	100	55.230	ENSFALG00000000012	TSEN2	100	55.180	Ficedula_albicollis
MGP_CAROLIEiJ_G0028752	Tsen2	100	64.363	ENSFDAG00000008132	TSEN2	100	63.931	Fukomys_damarensis
MGP_CAROLIEiJ_G0028752	Tsen2	100	52.720	ENSGALG00000004981	TSEN2	100	52.621	Gallus_gallus
MGP_CAROLIEiJ_G0028752	Tsen2	59	59.589	ENSGAFG00000019542	tsen2	76	59.589	Gambusia_affinis
MGP_CAROLIEiJ_G0028752	Tsen2	70	60.773	ENSGACG00000003387	tsen2	99	37.712	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	52.292	ENSGAGG00000022560	TSEN2	100	51.760	Gopherus_agassizii
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.368	ENSGGOG00000012488	TSEN2	100	67.158	Gorilla_gorilla
MGP_CAROLIEiJ_G0028752	Tsen2	68	62.637	ENSHBUG00000009039	tsen2	76	62.637	Haplochromis_burtoni
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.458	ENSHGLG00000000740	TSEN2	100	65.032	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.458	ENSHGLG00100001532	TSEN2	100	65.032	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028752	Tsen2	99	42.857	ENSIPUG00000011651	tsen2	99	43.030	Ictalurus_punctatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.098	ENSSTOG00000000538	TSEN2	100	66.383	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	44.375	ENSLACG00000008466	TSEN2	100	44.375	Latimeria_chalumnae
MGP_CAROLIEiJ_G0028752	Tsen2	100	46.122	ENSLOCG00000013958	tsen2	100	47.234	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.539	ENSLAFG00000009300	TSEN2	100	65.539	Loxodonta_africana
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.085	ENSMFAG00000038583	TSEN2	100	67.872	Macaca_fascicularis
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.085	ENSMMUG00000007195	TSEN2	100	67.872	Macaca_mulatta
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.085	ENSMNEG00000025898	TSEN2	100	67.872	Macaca_nemestrina
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.745	ENSMLEG00000038210	TSEN2	100	65.532	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028752	Tsen2	99	40.000	ENSMAMG00000009733	tsen2	99	40.000	Mastacembelus_armatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	53.623	ENSMGAG00000005015	TSEN2	100	53.209	Meleagris_gallopavo
MGP_CAROLIEiJ_G0028752	Tsen2	100	69.345	ENSMICG00000016672	TSEN2	100	68.922	Microcebus_murinus
MGP_CAROLIEiJ_G0028752	Tsen2	100	85.345	ENSMOCG00000020824	Tsen2	100	84.698	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028752	Tsen2	100	59.315	ENSMODG00000006249	TSEN2	100	58.584	Monodelphis_domestica
MGP_CAROLIEiJ_G0028752	Tsen2	100	97.408	ENSMUSG00000042389	Tsen2	100	97.408	Mus_musculus
MGP_CAROLIEiJ_G0028752	Tsen2	100	94.600	MGP_PahariEiJ_G0022503	Tsen2	100	94.600	Mus_pahari
MGP_CAROLIEiJ_G0028752	Tsen2	100	96.760	MGP_SPRETEiJ_G0029780	Tsen2	100	96.760	Mus_spretus
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.756	ENSMPUG00000017182	TSEN2	100	64.916	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.304	ENSMLUG00000017641	TSEN2	100	67.091	Myotis_lucifugus
MGP_CAROLIEiJ_G0028752	Tsen2	97	55.165	ENSNLEG00000033166	-	100	54.505	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.401	ENSNLEG00000004696	TSEN2	100	64.979	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028752	Tsen2	63	81.915	ENSMEUG00000014148	-	62	81.915	Notamacropus_eugenii
MGP_CAROLIEiJ_G0028752	Tsen2	100	62.151	ENSOPRG00000003456	TSEN2	100	61.853	Ochotona_princeps
MGP_CAROLIEiJ_G0028752	Tsen2	100	62.264	ENSODEG00000002629	TSEN2	100	62.264	Octodon_degus
MGP_CAROLIEiJ_G0028752	Tsen2	68	62.983	ENSONIG00000000278	tsen2	99	39.463	Oreochromis_niloticus
MGP_CAROLIEiJ_G0028752	Tsen2	100	55.292	ENSOANG00000011648	-	100	54.375	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.319	ENSOCUG00000013203	TSEN2	96	64.894	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028752	Tsen2	68	58.333	ENSORLG00000026661	-	77	58.333	Oryzias_latipes
MGP_CAROLIEiJ_G0028752	Tsen2	68	58.889	ENSORLG00020006129	-	77	58.889	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028752	Tsen2	68	58.333	ENSORLG00015000801	-	77	58.333	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028752	Tsen2	68	57.459	ENSOMEG00000001692	tsen2	77	57.459	Oryzias_melastigma
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.242	ENSOGAG00000002976	-	100	66.030	Otolemur_garnettii
MGP_CAROLIEiJ_G0028752	Tsen2	100	61.277	ENSOGAG00000028352	-	100	60.851	Otolemur_garnettii
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.524	ENSOARG00000016087	TSEN2	91	65.880	Ovis_aries
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.857	ENSPPAG00000035317	TSEN2	100	67.647	Pan_paniscus
MGP_CAROLIEiJ_G0028752	Tsen2	98	49.119	ENSPPAG00000034639	-	99	48.458	Pan_paniscus
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.011	ENSPTIG00000021018	TSEN2	100	64.363	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.579	ENSPTRG00000014633	TSEN2	100	67.368	Pan_troglodytes
MGP_CAROLIEiJ_G0028752	Tsen2	98	50.753	ENSPTRG00000050820	-	100	50.108	Pan_troglodytes
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.298	ENSPANG00000013415	TSEN2	100	68.085	Papio_anubis
MGP_CAROLIEiJ_G0028752	Tsen2	100	47.292	ENSPKIG00000024801	tsen2	100	47.689	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028752	Tsen2	99	53.333	ENSPSIG00000010669	-	96	53.002	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028752	Tsen2	100	82.543	ENSPEMG00000013175	Tsen2	100	81.681	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028752	Tsen2	100	57.764	ENSPCIG00000002191	TSEN2	100	57.764	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028752	Tsen2	67	59.341	ENSPFOG00000012459	tsen2	99	39.056	Poecilia_formosa
MGP_CAROLIEiJ_G0028752	Tsen2	67	59.341	ENSPLAG00000013787	tsen2	99	38.841	Poecilia_latipinna
MGP_CAROLIEiJ_G0028752	Tsen2	62	56.962	ENSPMEG00000002687	tsen2	83	56.962	Poecilia_mexicana
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.089	ENSPPYG00000013647	TSEN2	100	66.878	Pongo_abelii
MGP_CAROLIEiJ_G0028752	Tsen2	100	59.915	ENSPCAG00000003542	TSEN2	100	59.916	Procavia_capensis
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.925	ENSPCOG00000019328	TSEN2	100	67.511	Propithecus_coquereli
MGP_CAROLIEiJ_G0028752	Tsen2	82	80.269	ENSPVAG00000005820	TSEN2	80	79.821	Pteropus_vampyrus
MGP_CAROLIEiJ_G0028752	Tsen2	99	43.030	ENSPNAG00000008203	tsen2	99	43.030	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028752	Tsen2	100	89.126	ENSRNOG00000060175	Tsen2	100	88.273	Rattus_norvegicus
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.298	ENSRBIG00000033133	TSEN2	100	68.085	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0028752	Tsen2	100	68.298	ENSRROG00000041156	TSEN2	100	68.085	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028752	Tsen2	100	64.211	ENSSBOG00000035499	TSEN2	100	64.000	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028752	Tsen2	100	58.299	ENSSHAG00000010530	TSEN2	100	57.676	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028752	Tsen2	100	46.300	ENSSFOG00015001309	tsen2	100	45.763	Scleropages_formosus
MGP_CAROLIEiJ_G0028752	Tsen2	68	62.011	ENSSMAG00000006406	-	68	61.667	Scophthalmus_maximus
MGP_CAROLIEiJ_G0028752	Tsen2	68	61.878	ENSSDUG00000018175	tsen2	73	61.878	Seriola_dumerili
MGP_CAROLIEiJ_G0028752	Tsen2	51	50.943	ENSSLDG00000022171	-	62	50.943	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028752	Tsen2	100	55.391	ENSSPUG00000018099	TSEN2	100	54.968	Sphenodon_punctatus
MGP_CAROLIEiJ_G0028752	Tsen2	65	50.595	ENSSPAG00000021756	-	76	50.595	Stegastes_partitus
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.456	ENSSSCG00000011580	TSEN2	100	65.823	Sus_scrofa
MGP_CAROLIEiJ_G0028752	Tsen2	100	57.053	ENSTGUG00000004044	TSEN2	100	56.842	Taeniopygia_guttata
MGP_CAROLIEiJ_G0028752	Tsen2	96	35.333	ENSTRUG00000004124	-	79	56.707	Takifugu_rubripes
MGP_CAROLIEiJ_G0028752	Tsen2	99	37.209	ENSTNIG00000005222	-	99	37.209	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028752	Tsen2	74	77.451	ENSTBEG00000011740	TSEN2	74	77.451	Tupaia_belangeri
MGP_CAROLIEiJ_G0028752	Tsen2	100	65.263	ENSTTRG00000016566	TSEN2	100	65.053	Tursiops_truncatus
MGP_CAROLIEiJ_G0028752	Tsen2	100	67.155	ENSUMAG00000017610	TSEN2	100	66.527	Ursus_maritimus
MGP_CAROLIEiJ_G0028752	Tsen2	67	63.372	ENSVPAG00000011061	-	75	63.372	Vicugna_pacos
MGP_CAROLIEiJ_G0028752	Tsen2	100	66.736	ENSVVUG00000015253	TSEN2	100	66.736	Vulpes_vulpes
MGP_CAROLIEiJ_G0028752	Tsen2	80	48.021	ENSXETG00000025146	tsen2	99	47.368	Xenopus_tropicalis
MGP_CAROLIEiJ_G0028752	Tsen2	59	58.389	ENSXCOG00000017262	tsen2	78	58.389	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028752	Tsen2	59	58.784	ENSXMAG00000012479	tsen2	77	58.784	Xiphophorus_maculatus