EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0028785 (Gene tree)
Gene ID: 110295752
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 36085 bases
Position: chr6:113416957-113453041
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0075715	AARP2CN	PF08142.12	8.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0075716	-	2682	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075717	-	433	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0075715	-	3599	-	MGP_CAROLIEiJ_P0075715	1031 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0028785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0028785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0028785	-	86	94.660	ENSG00000165733	BMS1	70	94.660	Homo_sapiens
MGP_CAROLIEiJ_G0028785	-	62	79.060	ENSAPOG00000002296	bms1	70	78.723	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0028785	-	85	94.928	ENSAMEG00000016834	BMS1	70	94.928	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0028785	-	72	79.019	ENSACIG00000002588	bms1	67	76.131	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0028785	-	76	75.122	ENSAOCG00000018088	bms1	73	75.689	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0028785	-	73	78.632	ENSAPEG00000014673	bms1	79	78.632	Amphiprion_percula
MGP_CAROLIEiJ_G0028785	-	75	77.778	ENSATEG00000023465	bms1	72	76.884	Anabas_testudineus
MGP_CAROLIEiJ_G0028785	-	64	85.330	ENSAPLG00000003759	BMS1	52	86.364	Anas_platyrhynchos
MGP_CAROLIEiJ_G0028785	-	80	84.951	ENSACAG00000004537	-	72	84.951	Anolis_carolinensis
MGP_CAROLIEiJ_G0028785	-	86	94.903	ENSANAG00000023432	BMS1	71	94.903	Aotus_nancymaae
MGP_CAROLIEiJ_G0028785	-	73	80.342	ENSACLG00000001294	bms1	72	76.962	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0028785	-	76	73.415	ENSAMXG00000011236	bms1	72	74.055	Astyanax_mexicanus
MGP_CAROLIEiJ_G0028785	-	85	94.903	ENSBTAG00000012878	BMS1	73	94.903	Bos_taurus
MGP_CAROLIEiJ_G0028785	-	75	51.825	WBGene00022021	Y61A9LA.10	79	45.996	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0028785	-	85	94.660	ENSCJAG00000021705	BMS1	70	94.660	Callithrix_jacchus
MGP_CAROLIEiJ_G0028785	-	85	95.388	ENSCAFG00000007114	BMS1	73	95.388	Canis_familiaris
MGP_CAROLIEiJ_G0028785	-	85	95.388	ENSCAFG00020025282	BMS1	73	95.388	Canis_lupus_dingo
MGP_CAROLIEiJ_G0028785	-	85	94.903	ENSCHIG00000023251	BMS1	70	94.903	Capra_hircus
MGP_CAROLIEiJ_G0028785	-	86	93.447	ENSCAPG00000008652	BMS1	73	93.447	Cavia_aperea
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSCPOG00000000502	BMS1	74	95.146	Cavia_porcellus
MGP_CAROLIEiJ_G0028785	-	86	72.639	ENSCCAG00000024969	-	71	72.639	Cebus_capucinus
MGP_CAROLIEiJ_G0028785	-	86	94.417	ENSCATG00000030625	-	76	94.417	Cercocebus_atys
MGP_CAROLIEiJ_G0028785	-	84	67.241	ENSCATG00000008695	-	74	66.667	Cercocebus_atys
MGP_CAROLIEiJ_G0028785	-	86	94.903	ENSCLAG00000002446	BMS1	74	94.903	Chinchilla_lanigera
MGP_CAROLIEiJ_G0028785	-	86	95.388	ENSCSAG00000011118	BMS1	71	95.388	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0028785	-	86	92.961	ENSCHOG00000011055	BMS1	73	94.175	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0028785	-	83	88.471	ENSCPBG00000025581	BMS1	71	88.350	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0028785	-	76	58.354	ENSCING00000003181	-	82	58.621	Ciona_intestinalis
MGP_CAROLIEiJ_G0028785	-	62	64.730	ENSCSAVG00000004113	-	72	64.344	Ciona_savignyi
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSCANG00000011609	BMS1	75	90.873	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0028785	-	84	97.995	ENSCGRG00001019461	Bms1	71	97.816	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0028785	-	84	97.995	ENSCGRG00000009016	Bms1	71	97.816	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0028785	-	75	75.315	ENSCSEG00000002469	bms1	78	67.437	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0028785	-	61	77.836	ENSCVAG00000008371	bms1	83	57.945	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0028785	-	77	79.487	ENSDARG00000054154	bms1	81	79.487	Danio_rerio
MGP_CAROLIEiJ_G0028785	-	86	93.932	ENSDNOG00000015761	BMS1	73	93.932	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0028785	-	85	93.689	ENSDORG00000002982	Bms1	75	89.683	Dipodomys_ordii
MGP_CAROLIEiJ_G0028785	-	84	57.588	FBgn0036686	CG7728	77	57.588	Drosophila_melanogaster
MGP_CAROLIEiJ_G0028785	-	74	90.998	ENSETEG00000009554	BMS1	69	90.998	Echinops_telfairi
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSEASG00005006894	BMS1	74	95.146	Equus_asinus_asinus
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSECAG00000001358	BMS1	74	95.146	Equus_caballus
MGP_CAROLIEiJ_G0028785	-	77	76.039	ENSELUG00000001756	bms1	71	80.115	Esox_lucius
MGP_CAROLIEiJ_G0028785	-	86	94.660	ENSFCAG00000011220	BMS1	73	94.660	Felis_catus
MGP_CAROLIEiJ_G0028785	-	85	86.064	ENSFALG00000006882	BMS1	69	86.064	Ficedula_albicollis
MGP_CAROLIEiJ_G0028785	-	86	94.175	ENSFDAG00000001422	BMS1	71	94.175	Fukomys_damarensis
MGP_CAROLIEiJ_G0028785	-	59	78.933	ENSFHEG00000003367	bms1	77	78.723	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0028785	-	86	59.077	ENSGMOG00000000718	bms1	82	58.830	Gadus_morhua
MGP_CAROLIEiJ_G0028785	-	84	87.255	ENSGALG00000002624	BMS1	72	87.255	Gallus_gallus
MGP_CAROLIEiJ_G0028785	-	78	77.872	ENSGACG00000015334	bms1	65	73.580	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0028785	-	85	86.618	ENSGAGG00000003467	BMS1	74	86.650	Gopherus_agassizii
MGP_CAROLIEiJ_G0028785	-	74	78.571	ENSHBUG00000022628	bms1	68	80.342	Haplochromis_burtoni
MGP_CAROLIEiJ_G0028785	-	86	93.932	ENSHGLG00000000477	BMS1	74	93.932	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0028785	-	86	93.932	ENSHGLG00100002176	BMS1	74	93.932	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0028785	-	76	75.921	ENSHCOG00000017604	bms1	83	60.634	Hippocampus_comes
MGP_CAROLIEiJ_G0028785	-	84	74.020	ENSIPUG00000017855	bms1	68	77.778	Ictalurus_punctatus
MGP_CAROLIEiJ_G0028785	-	86	94.417	ENSSTOG00000015063	BMS1	81	90.079	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0028785	-	86	96.117	ENSJJAG00000017328	Bms1	83	79.190	Jaculus_jaculus
MGP_CAROLIEiJ_G0028785	-	75	78.298	ENSLBEG00000028208	bms1	79	77.966	Labrus_bergylta
MGP_CAROLIEiJ_G0028785	-	84	79.512	ENSLACG00000001600	BMS1	74	79.512	Latimeria_chalumnae
MGP_CAROLIEiJ_G0028785	-	81	80.342	ENSLOCG00000012914	bms1	74	80.000	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0028785	-	85	93.932	ENSLAFG00000006250	BMS1	73	93.932	Loxodonta_africana
MGP_CAROLIEiJ_G0028785	-	85	75.369	ENSMMUG00000007426	-	90	68.460	Macaca_mulatta
MGP_CAROLIEiJ_G0028785	-	84	75.186	ENSMLEG00000029084	-	82	75.188	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0028785	-	62	78.205	ENSMAMG00000020855	bms1	83	55.996	Mastacembelus_armatus
MGP_CAROLIEiJ_G0028785	-	74	78.307	ENSMZEG00005005663	bms1	72	76.709	Maylandia_zebra
MGP_CAROLIEiJ_G0028785	-	79	88.034	ENSMGAG00000001170	BMS1	71	88.034	Meleagris_gallopavo
MGP_CAROLIEiJ_G0028785	-	86	98.058	ENSMAUG00000002195	Bms1	71	98.058	Mesocricetus_auratus
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSMICG00000009977	BMS1	73	95.146	Microcebus_murinus
MGP_CAROLIEiJ_G0028785	-	86	96.359	ENSMOCG00000002038	Bms1	73	96.359	Microtus_ochrogaster
MGP_CAROLIEiJ_G0028785	-	73	77.394	ENSMMOG00000000977	bms1	75	76.010	Mola_mola
MGP_CAROLIEiJ_G0028785	-	85	90.557	ENSMODG00000001177	BMS1	69	90.557	Monodelphis_domestica
MGP_CAROLIEiJ_G0028785	-	84	77.872	ENSMALG00000009680	bms1	79	77.872	Monopterus_albus
MGP_CAROLIEiJ_G0028785	-	86	98.786	ENSMUSG00000030138	Bms1	81	83.835	Mus_musculus
MGP_CAROLIEiJ_G0028785	-	86	98.786	MGP_PahariEiJ_G0022539	Bms1	74	98.786	Mus_pahari
MGP_CAROLIEiJ_G0028785	-	86	98.544	MGP_SPRETEiJ_G0029816	Bms1	74	98.544	Mus_spretus
MGP_CAROLIEiJ_G0028785	-	85	95.146	ENSMPUG00000017276	BMS1	73	95.146	Mustela_putorius_furo
MGP_CAROLIEiJ_G0028785	-	85	93.961	ENSMLUG00000003260	BMS1	71	93.961	Myotis_lucifugus
MGP_CAROLIEiJ_G0028785	-	86	78.261	ENSNGAG00000015258	Bms1	76	78.450	Nannospalax_galili
MGP_CAROLIEiJ_G0028785	-	86	94.903	ENSNLEG00000015791	BMS1	87	90.079	Nomascus_leucogenys
MGP_CAROLIEiJ_G0028785	-	75	93.932	ENSOPRG00000005195	BMS1	66	93.932	Ochotona_princeps
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSODEG00000005554	BMS1	74	95.146	Octodon_degus
MGP_CAROLIEiJ_G0028785	-	77	81.197	ENSONIG00000007227	bms1	68	81.197	Oreochromis_niloticus
MGP_CAROLIEiJ_G0028785	-	85	90.315	ENSOANG00000000662	-	74	90.315	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0028785	-	86	94.903	ENSOCUG00000005354	BMS1	74	94.903	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0028785	-	62	79.915	ENSORLG00000014655	bms1	80	79.574	Oryzias_latipes
MGP_CAROLIEiJ_G0028785	-	75	76.441	ENSORLG00020016246	bms1	83	58.806	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0028785	-	76	76.049	ENSORLG00015014183	bms1	73	77.354	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0028785	-	63	80.342	ENSOMEG00000015042	bms1	80	80.342	Oryzias_melastigma
MGP_CAROLIEiJ_G0028785	-	86	95.652	ENSOGAG00000006511	BMS1	73	95.652	Otolemur_garnettii
MGP_CAROLIEiJ_G0028785	-	85	93.990	ENSOARG00000003900	BMS1	73	93.990	Ovis_aries
MGP_CAROLIEiJ_G0028785	-	80	95.146	ENSPPAG00000027837	BMS1	68	95.146	Pan_paniscus
MGP_CAROLIEiJ_G0028785	-	86	94.660	ENSPPRG00000001311	BMS1	73	94.660	Panthera_pardus
MGP_CAROLIEiJ_G0028785	-	86	94.660	ENSPTIG00000009652	BMS1	75	94.660	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0028785	-	86	95.146	ENSPTRG00000002441	BMS1	79	90.476	Pan_troglodytes
MGP_CAROLIEiJ_G0028785	-	76	75.243	ENSPKIG00000008165	bms1	65	75.735	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0028785	-	85	87.864	ENSPSIG00000006481	BMS1	72	87.440	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0028785	-	86	97.573	ENSPEMG00000022467	Bms1	82	82.540	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0028785	-	79	94.118	ENSPCIG00000001339	BMS1	72	89.588	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0028785	-	73	76.923	ENSPFOG00000015180	bms1	78	76.596	Poecilia_formosa
MGP_CAROLIEiJ_G0028785	-	59	77.067	ENSPMEG00000023176	bms1	78	59.536	Poecilia_mexicana
MGP_CAROLIEiJ_G0028785	-	59	77.350	ENSPREG00000002695	bms1	82	58.693	Poecilia_reticulata
MGP_CAROLIEiJ_G0028785	-	60	94.903	ENSPPYG00000002836	-	79	94.903	Pongo_abelii
MGP_CAROLIEiJ_G0028785	-	80	94.334	ENSPCOG00000023834	-	70	94.334	Propithecus_coquereli
MGP_CAROLIEiJ_G0028785	-	85	91.990	ENSPVAG00000000725	BMS1	73	91.990	Pteropus_vampyrus
MGP_CAROLIEiJ_G0028785	-	73	77.836	ENSPNYG00000018866	bms1	73	76.441	Pundamilia_nyererei
MGP_CAROLIEiJ_G0028785	-	77	75.369	ENSPNAG00000000676	bms1	80	79.487	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0028785	-	81	96.845	ENSRNOG00000006576	Bms1	82	96.845	Rattus_norvegicus
MGP_CAROLIEiJ_G0028785	-	86	91.270	ENSRROG00000040101	BMS1	88	91.270	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0028785	-	63	54.656	YPL217C	-	77	54.656	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0028785	-	86	94.903	ENSSBOG00000035778	BMS1	71	94.903	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0028785	-	85	90.073	ENSSHAG00000005062	BMS1	69	90.073	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0028785	-	78	74.515	ENSSFOG00015022313	bms1	74	75.434	Scleropages_formosus
MGP_CAROLIEiJ_G0028785	-	62	77.778	ENSSMAG00000019966	bms1	69	77.447	Scophthalmus_maximus
MGP_CAROLIEiJ_G0028785	-	62	77.350	ENSSDUG00000016875	bms1	64	76.441	Seriola_dumerili
MGP_CAROLIEiJ_G0028785	-	62	78.205	ENSSLDG00000015199	bms1	68	77.872	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0028785	-	56	93.204	ENSSARG00000014407	BMS1	67	93.204	Sorex_araneus
MGP_CAROLIEiJ_G0028785	-	85	87.105	ENSSPUG00000014454	BMS1	68	87.688	Sphenodon_punctatus
MGP_CAROLIEiJ_G0028785	-	86	95.388	ENSSSCG00000010198	BMS1	76	95.388	Sus_scrofa
MGP_CAROLIEiJ_G0028785	-	84	86.284	ENSTGUG00000006302	-	69	85.819	Taeniopygia_guttata
MGP_CAROLIEiJ_G0028785	-	78	73.016	ENSTRUG00000008028	bms1	82	57.443	Takifugu_rubripes
MGP_CAROLIEiJ_G0028785	-	76	71.149	ENSTNIG00000006216	bms1	65	71.930	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0028785	-	57	79.037	ENSTBEG00000001673	-	51	86.420	Tupaia_belangeri
MGP_CAROLIEiJ_G0028785	-	86	93.932	ENSTTRG00000007983	BMS1	73	93.932	Tursiops_truncatus
MGP_CAROLIEiJ_G0028785	-	85	95.388	ENSUAMG00000023996	BMS1	73	95.388	Ursus_americanus
MGP_CAROLIEiJ_G0028785	-	85	95.388	ENSUMAG00000016523	BMS1	73	95.388	Ursus_maritimus
MGP_CAROLIEiJ_G0028785	-	68	94.297	ENSVPAG00000007477	BMS1	61	94.297	Vicugna_pacos
MGP_CAROLIEiJ_G0028785	-	85	95.388	ENSVVUG00000021305	BMS1	74	95.388	Vulpes_vulpes
MGP_CAROLIEiJ_G0028785	-	76	79.365	ENSXETG00000008158	bms1	72	77.670	Xenopus_tropicalis
MGP_CAROLIEiJ_G0028785	-	72	77.568	ENSXCOG00000000506	bms1	93	75.443	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0028785	-	59	77.838	ENSXMAG00000014236	bms1	83	59.416	Xiphophorus_maculatus