EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029030 (Gene tree)
Gene ID: 110296042
Gene Symbol: Recql
Alias: RecQ1
Full Name: RecQ like helicase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 34183 bases
Position: chr6:140201180-140235362
Accession: 110296042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0076694	ResIII	PF04851.15	4.8e-06	1	1
MGP_CAROLIEiJ_P0076696	ResIII	PF04851.15	4.8e-06	1	1
MGP_CAROLIEiJ_P0076699	ResIII	PF04851.15	4.9e-06	1	1
MGP_CAROLIEiJ_P0076694	DEAD	PF00270.29	7.8e-17	1	1
MGP_CAROLIEiJ_P0076696	DEAD	PF00270.29	7.8e-17	1	1
MGP_CAROLIEiJ_P0076699	DEAD	PF00270.29	8.3e-17	1	1
MGP_CAROLIEiJ_P0076703	DEAD	PF00270.29	4.5e-10	1	1
MGP_CAROLIEiJ_P0076704	DEAD	PF00270.29	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0076698	-	697	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0076699	-	3396	-	MGP_CAROLIEiJ_P0076699	648 (aa)	XP_021020200	UPI000A3195D6
MGP_CAROLIEiJ_T0076696	-	3056	-	MGP_CAROLIEiJ_P0076696	634 (aa)	-	-
MGP_CAROLIEiJ_T0076697	-	3730	-	MGP_CAROLIEiJ_P0076697	234 (aa)	-	-
MGP_CAROLIEiJ_T0076694	-	2112	-	MGP_CAROLIEiJ_P0076694	631 (aa)	XP_021020202	UPI000A314AB0
MGP_CAROLIEiJ_T0076700	-	328	-	MGP_CAROLIEiJ_P0076700	62 (aa)	-	-
MGP_CAROLIEiJ_T0076701	-	667	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0076702	-	324	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0076703	-	818	-	MGP_CAROLIEiJ_P0076703	167 (aa)	-	-
MGP_CAROLIEiJ_T0076704	-	711	-	MGP_CAROLIEiJ_P0076704	167 (aa)	-	-
MGP_CAROLIEiJ_T0076705	-	349	-	MGP_CAROLIEiJ_P0076705	85 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029030	Recql	65	37.701	MGP_CAROLIEiJ_G0017420	Recql5	81	48.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029030	Recql	100	86.228	ENSG00000004700	RECQL	100	87.940	Homo_sapiens
MGP_CAROLIEiJ_G0029030	Recql	57	60.417	ENSAPOG00000021194	-	84	50.222	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029030	Recql	100	82.253	ENSAMEG00000016233	RECQL	100	82.253	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029030	Recql	92	59.122	ENSACIG00000020781	recql	93	59.291	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029030	Recql	98	56.220	ENSAOCG00000010244	recql	96	56.543	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029030	Recql	98	54.874	ENSAPEG00000002040	recql	97	55.450	Amphiprion_percula
MGP_CAROLIEiJ_G0029030	Recql	96	57.377	ENSATEG00000023342	recql	94	58.182	Anabas_testudineus
MGP_CAROLIEiJ_G0029030	Recql	99	71.894	ENSAPLG00000003404	RECQL	97	72.884	Anas_platyrhynchos
MGP_CAROLIEiJ_G0029030	Recql	99	70.909	ENSACAG00000017383	RECQL	99	78.492	Anolis_carolinensis
MGP_CAROLIEiJ_G0029030	Recql	99	86.656	ENSANAG00000035372	RECQL	99	86.265	Aotus_nancymaae
MGP_CAROLIEiJ_G0029030	Recql	96	57.423	ENSACLG00000021416	recql	96	54.799	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029030	Recql	98	57.532	ENSAMXG00000014249	recql	98	56.569	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029030	Recql	100	83.234	ENSBTAG00000021083	RECQL	100	83.205	Bos_taurus
MGP_CAROLIEiJ_G0029030	Recql	95	45.752	WBGene00019334	K02F3.12	97	45.752	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0029030	Recql	100	86.228	ENSCJAG00000044420	RECQL	100	85.362	Callithrix_jacchus
MGP_CAROLIEiJ_G0029030	Recql	100	83.179	ENSCAFG00000012221	RECQL	100	83.179	Canis_familiaris
MGP_CAROLIEiJ_G0029030	Recql	100	83.179	ENSCAFG00020007872	RECQL	100	83.179	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029030	Recql	100	83.234	ENSCHIG00000024281	RECQL	100	82.743	Capra_hircus
MGP_CAROLIEiJ_G0029030	Recql	100	86.826	ENSTSYG00000009224	RECQL	100	85.362	Carlito_syrichta
MGP_CAROLIEiJ_G0029030	Recql	100	86.826	ENSCPOG00000024644	RECQL	99	86.728	Cavia_porcellus
MGP_CAROLIEiJ_G0029030	Recql	100	86.826	ENSCCAG00000028085	RECQL	100	86.749	Cebus_capucinus
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSCATG00000036038	RECQL	100	86.595	Cercocebus_atys
MGP_CAROLIEiJ_G0029030	Recql	100	85.648	ENSCLAG00000014618	RECQL	100	85.648	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSCSAG00000007974	RECQL	100	86.133	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029030	Recql	100	82.635	ENSCHOG00000002452	RECQL	90	83.855	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029030	Recql	99	73.820	ENSCPBG00000009109	RECQL	99	73.820	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029030	Recql	99	38.824	ENSCING00000004012	-	93	44.444	Ciona_intestinalis
MGP_CAROLIEiJ_G0029030	Recql	94	40.127	ENSCSAVG00000011052	-	99	42.509	Ciona_savignyi
MGP_CAROLIEiJ_G0029030	Recql	100	86.826	ENSCANG00000035259	RECQL	100	86.133	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029030	Recql	100	91.049	ENSCGRG00001015141	Recql	100	91.049	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029030	Recql	100	91.049	ENSCGRG00000003545	Recql	100	91.049	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029030	Recql	96	55.556	ENSCSEG00000015932	recql	96	56.126	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029030	Recql	93	59.122	ENSCVAG00000014613	recql	96	58.347	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029030	Recql	99	56.719	ENSDARG00000007175	recql	99	56.366	Danio_rerio
MGP_CAROLIEiJ_G0029030	Recql	100	84.431	ENSDNOG00000013557	RECQL	99	88.174	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029030	Recql	100	80.838	ENSDORG00000015884	Recql	100	80.838	Dipodomys_ordii
MGP_CAROLIEiJ_G0029030	Recql	96	61.491	ENSETEG00000018325	-	63	75.161	Echinops_telfairi
MGP_CAROLIEiJ_G0029030	Recql	96	82.609	ENSETEG00000018631	-	99	76.012	Echinops_telfairi
MGP_CAROLIEiJ_G0029030	Recql	99	80.775	ENSEASG00005014041	RECQL	95	87.984	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029030	Recql	100	82.897	ENSECAG00000024762	RECQL	87	82.897	Equus_caballus
MGP_CAROLIEiJ_G0029030	Recql	98	57.937	ENSELUG00000011528	recql	97	58.095	Esox_lucius
MGP_CAROLIEiJ_G0029030	Recql	100	83.796	ENSFCAG00000030888	RECQL	99	83.796	Felis_catus
MGP_CAROLIEiJ_G0029030	Recql	96	72.442	ENSFALG00000002635	RECQL	98	71.203	Ficedula_albicollis
MGP_CAROLIEiJ_G0029030	Recql	100	85.648	ENSFDAG00000019693	RECQL	100	85.648	Fukomys_damarensis
MGP_CAROLIEiJ_G0029030	Recql	97	56.872	ENSFHEG00000014563	recql	99	56.872	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029030	Recql	80	58.383	ENSGMOG00000010504	recql	100	58.383	Gadus_morhua
MGP_CAROLIEiJ_G0029030	Recql	99	73.089	ENSGALG00000013174	RECQL	98	71.889	Gallus_gallus
MGP_CAROLIEiJ_G0029030	Recql	98	55.079	ENSGACG00000001005	recql	98	56.899	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029030	Recql	99	75.598	ENSGAGG00000025428	RECQL	99	73.660	Gopherus_agassizii
MGP_CAROLIEiJ_G0029030	Recql	100	85.362	ENSGGOG00000010985	RECQL	100	85.362	Gorilla_gorilla
MGP_CAROLIEiJ_G0029030	Recql	96	57.423	ENSHBUG00000001341	recql	95	57.835	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029030	Recql	99	87.138	ENSHGLG00000009712	RECQL	100	86.111	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029030	Recql	98	86.914	ENSHGLG00100015306	RECQL	100	85.891	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029030	Recql	99	56.822	ENSHCOG00000012735	recql	97	57.374	Hippocampus_comes
MGP_CAROLIEiJ_G0029030	Recql	99	53.195	ENSIPUG00000024092	recql	99	53.305	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029030	Recql	99	81.776	ENSSTOG00000006328	RECQL	100	81.776	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029030	Recql	98	87.117	ENSJJAG00000017339	Recql	100	84.577	Jaculus_jaculus
MGP_CAROLIEiJ_G0029030	Recql	95	54.705	ENSKMAG00000011232	recql	97	54.660	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029030	Recql	98	55.205	ENSLBEG00000023652	recql	97	55.151	Labrus_bergylta
MGP_CAROLIEiJ_G0029030	Recql	99	68.254	ENSLACG00000011482	RECQL	99	67.183	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029030	Recql	100	53.892	ENSLOCG00000015393	recql	98	52.550	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029030	Recql	99	84.603	ENSLAFG00000000963	RECQL	99	84.603	Loxodonta_africana
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSMFAG00000031470	RECQL	100	86.133	Macaca_fascicularis
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSMMUG00000010857	RECQL	100	86.133	Macaca_mulatta
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSMNEG00000031827	RECQL	100	86.133	Macaca_nemestrina
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSMLEG00000039659	RECQL	99	88.147	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029030	Recql	94	56.343	ENSMAMG00000023289	recql	94	56.908	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029030	Recql	94	57.749	ENSMZEG00005016027	recql	96	57.749	Maylandia_zebra
MGP_CAROLIEiJ_G0029030	Recql	99	73.567	ENSMGAG00000013629	RECQL	96	72.939	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029030	Recql	100	88.623	ENSMAUG00000010642	Recql	99	90.558	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029030	Recql	99	83.333	ENSMICG00000002664	RECQL	99	83.333	Microcebus_murinus
MGP_CAROLIEiJ_G0029030	Recql	100	88.735	ENSMOCG00000007093	Recql	100	88.735	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029030	Recql	98	55.449	ENSMMOG00000007279	recql	97	55.929	Mola_mola
MGP_CAROLIEiJ_G0029030	Recql	98	81.159	ENSMODG00000017805	RECQL	99	79.570	Monodelphis_domestica
MGP_CAROLIEiJ_G0029030	Recql	94	56.788	ENSMALG00000004415	recql	94	57.048	Monopterus_albus
MGP_CAROLIEiJ_G0029030	Recql	100	97.623	ENSMUSG00000030243	Recql	100	97.623	Mus_musculus
MGP_CAROLIEiJ_G0029030	Recql	100	96.296	MGP_PahariEiJ_G0022791	Recql	100	96.296	Mus_pahari
MGP_CAROLIEiJ_G0029030	Recql	100	98.574	MGP_SPRETEiJ_G0030085	Recql	100	98.574	Mus_spretus
MGP_CAROLIEiJ_G0029030	Recql	100	82.743	ENSMPUG00000000202	RECQL	100	82.743	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029030	Recql	100	83.975	ENSMLUG00000005741	RECQL	100	83.975	Myotis_lucifugus
MGP_CAROLIEiJ_G0029030	Recql	100	88.426	ENSNGAG00000010997	-	100	88.426	Nannospalax_galili
MGP_CAROLIEiJ_G0029030	Recql	100	76.786	ENSNGAG00000020417	-	98	72.615	Nannospalax_galili
MGP_CAROLIEiJ_G0029030	Recql	93	59.359	ENSNBRG00000020825	recql	98	56.719	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSNLEG00000004797	RECQL	100	86.441	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029030	Recql	100	86.228	ENSOPRG00000007493	RECQL	100	87.312	Ochotona_princeps
MGP_CAROLIEiJ_G0029030	Recql	97	86.319	ENSODEG00000010240	RECQL	100	86.319	Octodon_degus
MGP_CAROLIEiJ_G0029030	Recql	95	57.443	ENSONIG00000001694	recql	96	57.443	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029030	Recql	56	58.511	ENSOANG00000021930	-	100	46.921	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029030	Recql	100	84.152	ENSOCUG00000008787	RECQL	100	83.975	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029030	Recql	97	55.226	ENSORLG00000012853	recql	97	54.000	Oryzias_latipes
MGP_CAROLIEiJ_G0029030	Recql	96	56.522	ENSORLG00020020245	recql	97	56.522	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029030	Recql	96	56.522	ENSORLG00015018708	recql	97	56.522	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029030	Recql	97	57.120	ENSOMEG00000019484	recql	97	57.120	Oryzias_melastigma
MGP_CAROLIEiJ_G0029030	Recql	99	84.961	ENSOGAG00000004754	RECQL	99	84.961	Otolemur_garnettii
MGP_CAROLIEiJ_G0029030	Recql	100	83.234	ENSOARG00000020343	RECQL	100	83.205	Ovis_aries
MGP_CAROLIEiJ_G0029030	Recql	93	86.711	ENSPPAG00000030306	RECQL	99	82.923	Pan_paniscus
MGP_CAROLIEiJ_G0029030	Recql	100	83.642	ENSPPRG00000010371	RECQL	99	83.642	Panthera_pardus
MGP_CAROLIEiJ_G0029030	Recql	100	83.642	ENSPTIG00000008593	RECQL	100	83.642	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029030	Recql	100	86.826	ENSPTRG00000004758	RECQL	99	85.538	Pan_troglodytes
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSPANG00000003394	RECQL	100	86.287	Papio_anubis
MGP_CAROLIEiJ_G0029030	Recql	98	57.778	ENSPKIG00000008072	recql	97	57.778	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029030	Recql	95	78.939	ENSPSIG00000002979	RECQL	96	74.613	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029030	Recql	94	56.013	ENSPMGG00000011010	recql	92	56.146	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029030	Recql	100	92.758	ENSPEMG00000016418	Recql	100	92.758	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029030	Recql	100	53.179	ENSPMAG00000005495	recql	100	57.331	Petromyzon_marinus
MGP_CAROLIEiJ_G0029030	Recql	99	80.868	ENSPCIG00000022452	RECQL	99	79.020	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029030	Recql	96	56.714	ENSPFOG00000000940	recql	96	56.714	Poecilia_formosa
MGP_CAROLIEiJ_G0029030	Recql	96	56.556	ENSPLAG00000006194	recql	96	56.556	Poecilia_latipinna
MGP_CAROLIEiJ_G0029030	Recql	97	56.025	ENSPMEG00000013399	recql	97	56.025	Poecilia_mexicana
MGP_CAROLIEiJ_G0029030	Recql	96	56.240	ENSPREG00000012991	recql	98	56.240	Poecilia_reticulata
MGP_CAROLIEiJ_G0029030	Recql	100	86.228	ENSPPYG00000004352	RECQL	100	85.670	Pongo_abelii
MGP_CAROLIEiJ_G0029030	Recql	100	83.832	ENSPCOG00000027353	RECQL	100	83.832	Propithecus_coquereli
MGP_CAROLIEiJ_G0029030	Recql	93	84.909	ENSPVAG00000002457	RECQL	93	84.909	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029030	Recql	96	57.423	ENSPNYG00000016013	recql	96	57.749	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029030	Recql	98	58.188	ENSPNAG00000029317	recql	96	59.069	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029030	Recql	98	89.839	ENSRNOG00000012602	Recql	99	91.107	Rattus_norvegicus
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSRBIG00000034966	RECQL	100	85.824	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029030	Recql	100	87.425	ENSRROG00000010234	RECQL	100	85.824	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029030	Recql	100	86.595	ENSSBOG00000005645	RECQL	100	86.595	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029030	Recql	99	80.383	ENSSHAG00000015815	RECQL	99	79.020	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029030	Recql	98	59.873	ENSSFOG00015002537	recql	96	59.873	Scleropages_formosus
MGP_CAROLIEiJ_G0029030	Recql	94	55.810	ENSSMAG00000014910	recql	95	56.137	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029030	Recql	98	55.380	ENSSDUG00000019205	recql	95	56.393	Seriola_dumerili
MGP_CAROLIEiJ_G0029030	Recql	98	55.380	ENSSLDG00000013921	recql	95	56.393	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029030	Recql	90	63.204	ENSSPUG00000018613	RECQL	98	60.097	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029030	Recql	97	54.896	ENSSPAG00000008384	recql	98	55.112	Stegastes_partitus
MGP_CAROLIEiJ_G0029030	Recql	100	82.435	ENSSSCG00000000580	RECQL	100	84.249	Sus_scrofa
MGP_CAROLIEiJ_G0029030	Recql	99	70.543	ENSTGUG00000011730	RECQL	98	70.968	Taeniopygia_guttata
MGP_CAROLIEiJ_G0029030	Recql	95	56.073	ENSTRUG00000000534	recql	99	57.143	Takifugu_rubripes
MGP_CAROLIEiJ_G0029030	Recql	99	53.994	ENSTNIG00000007242	recql	99	53.994	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029030	Recql	91	84.170	ENSTBEG00000004653	RECQL	91	84.170	Tupaia_belangeri
MGP_CAROLIEiJ_G0029030	Recql	100	81.437	ENSTTRG00000003296	RECQL	90	81.687	Tursiops_truncatus
MGP_CAROLIEiJ_G0029030	Recql	100	82.407	ENSUAMG00000003261	RECQL	100	82.407	Ursus_americanus
MGP_CAROLIEiJ_G0029030	Recql	100	83.488	ENSUMAG00000001523	RECQL	100	83.488	Ursus_maritimus
MGP_CAROLIEiJ_G0029030	Recql	89	85.764	ENSVPAG00000007546	RECQL	89	85.764	Vicugna_pacos
MGP_CAROLIEiJ_G0029030	Recql	100	83.333	ENSVVUG00000001101	RECQL	100	83.333	Vulpes_vulpes
MGP_CAROLIEiJ_G0029030	Recql	79	69.632	ENSXETG00000013524	recql	99	70.019	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029030	Recql	92	57.653	ENSXMAG00000029316	recql	91	58.037	Xiphophorus_maculatus