EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029099 (Gene tree)
Gene ID: 110297595
Gene Symbol: Tsen34
Alias: 0610027F08Rik|Leng5
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 7684 bases
Position: chr7:465218-472901
Accession: 110297595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077097	tRNA_int_endo	PF01974.17	7.6e-21	1	1
MGP_CAROLIEiJ_P0077100	tRNA_int_endo	PF01974.17	7.6e-21	1	1
MGP_CAROLIEiJ_P0077102	tRNA_int_endo	PF01974.17	7.6e-21	1	1
MGP_CAROLIEiJ_P0077106	tRNA_int_endo	PF01974.17	7.6e-21	1	1
MGP_CAROLIEiJ_P0077099	tRNA_int_endo	PF01974.17	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077105	-	927	-	MGP_CAROLIEiJ_P0077105	167 (aa)	-	-
MGP_CAROLIEiJ_T0077104	-	480	-	MGP_CAROLIEiJ_P0077104	143 (aa)	-	UPI00015AA4F2
MGP_CAROLIEiJ_T0077106	-	1304	-	MGP_CAROLIEiJ_P0077106	311 (aa)	XP_021022086	UPI000A31985F
MGP_CAROLIEiJ_T0077101	-	1159	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077096	-	337	-	MGP_CAROLIEiJ_P0077096	85 (aa)	-	UPI000719A3ED
MGP_CAROLIEiJ_T0077103	-	709	-	MGP_CAROLIEiJ_P0077103	158 (aa)	-	-
MGP_CAROLIEiJ_T0077102	-	1310	-	MGP_CAROLIEiJ_P0077102	311 (aa)	XP_021022086	UPI000A31985F
MGP_CAROLIEiJ_T0077097	-	1771	-	MGP_CAROLIEiJ_P0077097	311 (aa)	XP_021022086	UPI000A31985F
MGP_CAROLIEiJ_T0077099	-	1359	-	MGP_CAROLIEiJ_P0077099	290 (aa)	-	-
MGP_CAROLIEiJ_T0077098	-	720	-	MGP_CAROLIEiJ_P0077098	150 (aa)	-	-
MGP_CAROLIEiJ_T0077100	-	1362	-	MGP_CAROLIEiJ_P0077100	311 (aa)	XP_021022086	UPI000A31985F

Gene Model

Click here to download MGP_CAROLIEiJ_G0029099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSG00000170892	TSEN34	100	88.462	Homo_sapiens
MGP_CAROLIEiJ_G0029099	Tsen34	94	37.415	ENSAPOG00000008579	-	93	37.415	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029099	Tsen34	94	36.054	ENSAPOG00000012557	-	86	36.054	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.387	ENSAPOG00000001248	tsen34	93	38.387	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029099	Tsen34	92	86.667	ENSAMEG00000004585	TSEN34	100	86.667	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.558	ENSACIG00000007110	tsen34	87	38.558	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.482	ENSAOCG00000006905	tsen34	93	39.159	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.806	ENSAPEG00000019171	tsen34	93	39.482	Amphiprion_percula
MGP_CAROLIEiJ_G0029099	Tsen34	100	45.570	ENSACAG00000016189	TSEN34	100	45.570	Anolis_carolinensis
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.103	ENSANAG00000026113	TSEN34	100	88.103	Aotus_nancymaae
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.228	ENSAMXG00000017568	tsen34	86	39.228	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.179	ENSBTAG00000006486	TSEN34	100	88.179	Bos_taurus
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.852	ENSCJAG00000001128	TSEN34	99	87.919	Callithrix_jacchus
MGP_CAROLIEiJ_G0029099	Tsen34	100	86.581	ENSCAFG00000002675	TSEN34	100	86.581	Canis_familiaris
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.138	ENSCAFG00020018350	TSEN34	100	87.138	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.852	ENSCHIG00000020705	TSEN34	100	85.852	Capra_hircus
MGP_CAROLIEiJ_G0029099	Tsen34	98	85.621	ENSTSYG00000028200	TSEN34	98	85.621	Carlito_syrichta
MGP_CAROLIEiJ_G0029099	Tsen34	66	76.667	ENSCAPG00000012811	-	99	76.667	Cavia_aperea
MGP_CAROLIEiJ_G0029099	Tsen34	99	81.447	ENSCPOG00000012672	TSEN34	99	81.447	Cavia_porcellus
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.460	ENSCCAG00000036023	TSEN34	100	87.460	Cebus_capucinus
MGP_CAROLIEiJ_G0029099	Tsen34	96	86.288	ENSCATG00000033390	TSEN34	94	86.288	Cercocebus_atys
MGP_CAROLIEiJ_G0029099	Tsen34	100	84.244	ENSCLAG00000000618	TSEN34	100	84.244	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSCSAG00000001891	TSEN34	100	87.821	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSCANG00000040984	TSEN34	100	87.821	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	93.354	ENSCGRG00001006296	Tsen34	100	93.354	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029099	Tsen34	72	84.034	ENSCGRG00000008494	Tsen34	100	86.975	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029099	Tsen34	96	38.870	ENSCSEG00000006278	tsen34	86	38.870	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029099	Tsen34	99	37.460	ENSDARG00000061370	tsen34	89	37.778	Danio_rerio
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.623	ENSDNOG00000039332	TSEN34	100	85.304	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.897	ENSDORG00000029071	Tsen34	100	85.897	Dipodomys_ordii
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.852	ENSEASG00005021580	TSEN34	100	85.852	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029099	Tsen34	100	86.174	ENSECAG00000019651	TSEN34	86	86.174	Equus_caballus
MGP_CAROLIEiJ_G0029099	Tsen34	60	80.749	ENSEEUG00000005692	TSEN34	66	80.749	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029099	Tsen34	99	37.539	ENSELUG00000006262	tsen34	92	37.539	Esox_lucius
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.852	ENSFCAG00000014045	TSEN34	100	85.852	Felis_catus
MGP_CAROLIEiJ_G0029099	Tsen34	84	80.916	ENSFDAG00000017995	TSEN34	98	82.422	Fukomys_damarensis
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.482	ENSGAFG00000016880	tsen34	93	39.482	Gambusia_affinis
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.558	ENSGACG00000004800	tsen34	99	38.558	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	47.003	ENSGAGG00000008982	TSEN34	73	47.003	Gopherus_agassizii
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSGGOG00000008197	TSEN34	100	88.462	Gorilla_gorilla
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.350	ENSHGLG00000017619	TSEN34	100	85.350	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029099	Tsen34	100	67.834	ENSHGLG00100008719	TSEN34	100	68.770	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029099	Tsen34	96	38.742	ENSHCOG00000001368	tsen34	92	38.742	Hippocampus_comes
MGP_CAROLIEiJ_G0029099	Tsen34	96	37.742	ENSIPUG00000008359	tsen34	85	37.742	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	84.887	ENSSTOG00000023816	TSEN34	100	84.887	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	90.506	ENSJJAG00000016301	Tsen34	100	90.506	Jaculus_jaculus
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.048	ENSKMAG00000007181	tsen34	82	40.065	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.936	ENSLBEG00000015001	tsen34	94	39.936	Labrus_bergylta
MGP_CAROLIEiJ_G0029099	Tsen34	74	42.324	ENSLACG00000013346	-	99	43.154	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.835	ENSLOCG00000001887	tsen34	97	38.835	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	86.164	ENSLAFG00000015215	TSEN34	100	86.164	Loxodonta_africana
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSMFAG00000044825	TSEN34	100	87.821	Macaca_fascicularis
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSMMUG00000016571	TSEN34	100	87.821	Macaca_mulatta
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSMNEG00000045457	TSEN34	100	87.821	Macaca_nemestrina
MGP_CAROLIEiJ_G0029099	Tsen34	96	72.241	ENSMLEG00000034295	TSEN34	93	72.241	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.658	ENSMAMG00000018407	tsen34	95	38.264	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	86.007	ENSMAUG00000019716	Tsen34	91	86.007	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029099	Tsen34	100	90.705	ENSMICG00000002409	TSEN34	100	90.705	Microcebus_murinus
MGP_CAROLIEiJ_G0029099	Tsen34	100	95.597	ENSMOCG00000022190	Tsen34	100	95.597	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029099	Tsen34	99	36.774	ENSMMOG00000009551	tsen34	99	35.484	Mola_mola
MGP_CAROLIEiJ_G0029099	Tsen34	99	58.710	ENSMODG00000003984	-	76	61.093	Monodelphis_domestica
MGP_CAROLIEiJ_G0029099	Tsen34	97	39.103	ENSMALG00000018918	tsen34	94	37.061	Monopterus_albus
MGP_CAROLIEiJ_G0029099	Tsen34	100	99.359	ENSMUSG00000035585	Tsen34	100	99.359	Mus_musculus
MGP_CAROLIEiJ_G0029099	Tsen34	100	99.042	MGP_PahariEiJ_G0020968	Tsen34	100	99.042	Mus_pahari
MGP_CAROLIEiJ_G0029099	Tsen34	100	99.679	MGP_SPRETEiJ_G0030152	Tsen34	100	99.679	Mus_spretus
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.460	ENSMPUG00000010373	TSEN34	100	87.460	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029099	Tsen34	100	85.669	ENSMLUG00000016894	TSEN34	100	85.669	Myotis_lucifugus
MGP_CAROLIEiJ_G0029099	Tsen34	87	91.732	ENSNGAG00000016187	Tsen34	93	91.732	Nannospalax_galili
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.821	ENSNLEG00000006309	TSEN34	100	87.821	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029099	Tsen34	99	60.323	ENSMEUG00000002978	TSEN34	99	60.323	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029099	Tsen34	100	79.193	ENSODEG00000000096	TSEN34	100	79.193	Octodon_degus
MGP_CAROLIEiJ_G0029099	Tsen34	76	52.743	ENSOANG00000014747	-	99	52.743	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.264	ENSORLG00015012740	tsen34	94	38.907	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.141	ENSOGAG00000006966	TSEN34	100	88.141	Otolemur_garnettii
MGP_CAROLIEiJ_G0029099	Tsen34	91	81.338	ENSOARG00000002763	TSEN34	95	81.338	Ovis_aries
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.141	ENSPPAG00000036935	TSEN34	100	88.141	Pan_paniscus
MGP_CAROLIEiJ_G0029099	Tsen34	100	86.174	ENSPPRG00000011779	TSEN34	100	86.174	Panthera_pardus
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSPTRG00000011448	TSEN34	100	88.462	Pan_troglodytes
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSPTRG00000044768	-	100	88.462	Pan_troglodytes
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.141	ENSPANG00000012101	TSEN34	100	88.141	Papio_anubis
MGP_CAROLIEiJ_G0029099	Tsen34	96	38.689	ENSPKIG00000014674	tsen34	90	38.689	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029099	Tsen34	100	96.795	ENSPEMG00000014535	Tsen34	100	96.795	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.095	ENSPFOG00000008679	tsen34	93	39.297	Poecilia_formosa
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.710	ENSPLAG00000017309	tsen34	93	38.978	Poecilia_latipinna
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.095	ENSPMEG00000005235	tsen34	93	39.297	Poecilia_mexicana
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.782	ENSPREG00000021784	tsen34	93	38.782	Poecilia_reticulata
MGP_CAROLIEiJ_G0029099	Tsen34	100	89.103	ENSPPYG00000010376	TSEN34	96	89.103	Pongo_abelii
MGP_CAROLIEiJ_G0029099	Tsen34	99	86.774	ENSPCAG00000012359	TSEN34	100	86.774	Procavia_capensis
MGP_CAROLIEiJ_G0029099	Tsen34	100	89.137	ENSPCOG00000013843	TSEN34	100	90.415	Propithecus_coquereli
MGP_CAROLIEiJ_G0029099	Tsen34	100	83.013	ENSPVAG00000015570	TSEN34	100	83.013	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029099	Tsen34	99	36.792	ENSPNAG00000028698	tsen34	86	36.792	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029099	Tsen34	100	99.038	ENSRNOG00000055179	Tsen34	100	99.038	Rattus_norvegicus
MGP_CAROLIEiJ_G0029099	Tsen34	100	99.038	ENSRNOG00000059572	Tsen34l1	100	99.038	Rattus_norvegicus
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSRBIG00000034430	TSEN34	100	88.462	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.462	ENSRROG00000024217	TSEN34	100	88.462	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029099	Tsen34	96	87.584	ENSSBOG00000016017	TSEN34	97	87.542	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029099	Tsen34	70	58.065	ENSSHAG00000009295	-	99	58.986	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029099	Tsen34	96	40.728	ENSSMAG00000005214	tsen34	93	40.728	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.490	ENSSDUG00000005391	tsen34	91	39.490	Seriola_dumerili
MGP_CAROLIEiJ_G0029099	Tsen34	99	39.809	ENSSLDG00000006144	tsen34	88	39.490	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029099	Tsen34	94	75.000	ENSSARG00000005857	TSEN34	79	75.000	Sorex_araneus
MGP_CAROLIEiJ_G0029099	Tsen34	100	41.379	ENSSPUG00000008447	TSEN34	100	41.379	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.188	ENSSPAG00000010512	tsen34	92	37.864	Stegastes_partitus
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.179	ENSSSCG00000003268	TSEN34	100	87.179	Sus_scrofa
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.460	ENSTTRG00000006571	TSEN34	100	87.460	Tursiops_truncatus
MGP_CAROLIEiJ_G0029099	Tsen34	100	88.103	ENSUAMG00000008701	TSEN34	100	88.103	Ursus_americanus
MGP_CAROLIEiJ_G0029099	Tsen34	100	87.138	ENSVVUG00000008211	TSEN34	100	87.138	Vulpes_vulpes
MGP_CAROLIEiJ_G0029099	Tsen34	100	42.222	ENSXETG00000004597	tsen34	100	43.082	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029099	Tsen34	99	38.835	ENSXMAG00000024266	tsen34	93	38.835	Xiphophorus_maculatus