EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029140 (Gene tree)
Gene ID: 110298360
Gene Symbol: Zfp579
Alias: 1110003A17Rik
Full Name: zinc finger protein 579
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 12879 bases
Position: chr7:1660610-1673488
Accession: 110298360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	1	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	2	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	3	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	4	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	5	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	6	7
MGP_CAROLIEiJ_P0077299	zf-C2H2	PF00096.26	5.5e-35	7	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	1	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	2	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	3	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	4	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	5	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	6	7
MGP_CAROLIEiJ_P0077300	zf-C2H2	PF00096.26	5.5e-35	7	7
MGP_CAROLIEiJ_P0077301	zf-C2H2	PF00096.26	6.9e-14	1	3
MGP_CAROLIEiJ_P0077301	zf-C2H2	PF00096.26	6.9e-14	2	3
MGP_CAROLIEiJ_P0077301	zf-C2H2	PF00096.26	6.9e-14	3	3
MGP_CAROLIEiJ_P0077301	zf-met	PF12874.7	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077297	-	1543	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077302	-	363	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077301	-	794	-	MGP_CAROLIEiJ_P0077301	236 (aa)	-	-
MGP_CAROLIEiJ_T0077300	-	2148	XM_021167553	MGP_CAROLIEiJ_P0077300	559 (aa)	XP_021023210	UPI000A318195
MGP_CAROLIEiJ_T0077299	-	2477	XM_021167552	MGP_CAROLIEiJ_P0077299	559 (aa)	XP_021023210	UPI000A318195
MGP_CAROLIEiJ_T0077298	-	847	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029140	Zfp579	75	43.860	MGP_CAROLIEiJ_G0029144	-	66	42.593
MGP_CAROLIEiJ_G0029140	Zfp579	83	38.776	MGP_CAROLIEiJ_G0030525	Zfp646	52	38.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029140	Zfp579	100	98.729	ENSMUSG00000051550	Zfp579	100	98.729	Mus_musculus
MGP_CAROLIEiJ_G0029140	Zfp579	100	97.034	MGP_PahariEiJ_G0021008	Zfp579	100	97.034	Mus_pahari
MGP_CAROLIEiJ_G0029140	Zfp579	100	98.043	MGP_SPRETEiJ_G0030193	Zfp579	100	98.043	Mus_spretus