EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029144 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3753 bases
Position: chr7:1705428-1709180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	1	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	2	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	3	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	4	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	5	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	6	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	7	8
MGP_CAROLIEiJ_P0077308	zf-C2H2	PF00096.26	2.6e-46	8	8
MGP_CAROLIEiJ_P0077308	zf-met	PF12874.7	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077308	-	2271	-	MGP_CAROLIEiJ_P0077308	756 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029144	-	67	31.202	MGP_CAROLIEiJ_G0019949	Zfp251	70	35.758
MGP_CAROLIEiJ_G0029144	-	68	32.308	MGP_CAROLIEiJ_G0016306	Zfp354a	69	47.458
MGP_CAROLIEiJ_G0029144	-	69	30.918	MGP_CAROLIEiJ_G0020389	Zfp597	62	39.744
MGP_CAROLIEiJ_G0029144	-	75	31.716	MGP_CAROLIEiJ_G0028343	Repin1	80	34.831
MGP_CAROLIEiJ_G0029144	-	68	33.228	MGP_CAROLIEiJ_G0029329	Zfp94	70	46.078
MGP_CAROLIEiJ_G0029144	-	66	31.298	MGP_CAROLIEiJ_G0029324	Zfp111	74	34.000
MGP_CAROLIEiJ_G0029144	-	68	36.184	MGP_CAROLIEiJ_G0030498	Zfp768	51	44.167
MGP_CAROLIEiJ_G0029144	-	67	32.487	MGP_CAROLIEiJ_G0018661	Zfp759	86	47.561
MGP_CAROLIEiJ_G0029144	-	66	34.715	MGP_CAROLIEiJ_G0018660	-	62	35.326
MGP_CAROLIEiJ_G0029144	-	68	34.483	MGP_CAROLIEiJ_G0018683	Zfp493	84	40.741
MGP_CAROLIEiJ_G0029144	-	66	31.646	MGP_CAROLIEiJ_G0029490	Zfp420	94	30.469
MGP_CAROLIEiJ_G0029144	-	67	30.075	MGP_CAROLIEiJ_G0015655	-	80	37.126
MGP_CAROLIEiJ_G0029144	-	70	41.463	MGP_CAROLIEiJ_G0029356	Zfp574	58	41.463
MGP_CAROLIEiJ_G0029144	-	67	30.667	MGP_CAROLIEiJ_G0016391	Zfp672	85	39.785
MGP_CAROLIEiJ_G0029144	-	66	48.148	MGP_CAROLIEiJ_G0029146	Zfp784	65	48.148
MGP_CAROLIEiJ_G0029144	-	99	100.000	MGP_CAROLIEiJ_G0029143	-	99	100.000
MGP_CAROLIEiJ_G0029144	-	66	42.593	MGP_CAROLIEiJ_G0029140	Zfp579	75	43.860
MGP_CAROLIEiJ_G0029144	-	70	38.596	MGP_CAROLIEiJ_G0029614	Zfp715	65	34.483
MGP_CAROLIEiJ_G0029144	-	71	30.072	MGP_CAROLIEiJ_G0031420	Zfp319	86	32.749
MGP_CAROLIEiJ_G0029144	-	67	32.000	MGP_CAROLIEiJ_G0029327	Zfp93	64	38.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029144	-	99	84.605	ENSG00000261221	ZNF865	98	85.864	Homo_sapiens
MGP_CAROLIEiJ_G0029144	-	65	40.838	ENSACLG00000016648	-	65	40.659	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029144	-	96	81.547	ENSCAFG00000002564	ZNF865	98	83.660	Canis_familiaris
MGP_CAROLIEiJ_G0029144	-	96	81.547	ENSCAFG00020015473	ZNF865	98	83.660	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029144	-	99	77.881	ENSCHIG00000012252	ZNF865	100	78.129	Capra_hircus
MGP_CAROLIEiJ_G0029144	-	85	97.727	ENSCAPG00000009522	ZNF865	86	97.561	Cavia_aperea
MGP_CAROLIEiJ_G0029144	-	97	77.507	ENSCPOG00000040579	ZNF865	98	80.429	Cavia_porcellus
MGP_CAROLIEiJ_G0029144	-	97	55.348	ENSCPBG00000004542	ZNF865	92	56.983	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029144	-	99	80.443	ENSCGRG00001013598	Zfp865	99	83.420	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029144	-	95	87.868	ENSDNOG00000045263	ZNF865	99	78.496	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029144	-	97	59.710	ENSDORG00000023200	Zfp865	97	78.873	Dipodomys_ordii
MGP_CAROLIEiJ_G0029144	-	80	76.812	ENSETEG00000015836	ZNF865	70	78.689	Echinops_telfairi
MGP_CAROLIEiJ_G0029144	-	95	93.407	ENSEASG00005020728	ZNF865	92	85.507	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029144	-	99	81.987	ENSECAG00000035836	ZNF865	96	85.771	Equus_caballus
MGP_CAROLIEiJ_G0029144	-	96	77.328	ENSFCAG00000028412	ZNF865	85	80.667	Felis_catus
MGP_CAROLIEiJ_G0029144	-	97	55.061	ENSGAGG00000003095	ZNF865	96	54.727	Gopherus_agassizii
MGP_CAROLIEiJ_G0029144	-	83	69.953	ENSHGLG00100008506	ZNF865	97	100.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029144	-	99	87.782	ENSSTOG00000025586	ZNF865	100	87.583	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029144	-	97	86.821	ENSJJAG00000011934	Zfp865	98	87.500	Jaculus_jaculus
MGP_CAROLIEiJ_G0029144	-	88	62.564	ENSLAFG00000030700	ZNF865	99	86.420	Loxodonta_africana
MGP_CAROLIEiJ_G0029144	-	99	84.717	ENSMFAG00000044401	ZNF865	98	85.059	Macaca_fascicularis
MGP_CAROLIEiJ_G0029144	-	99	85.639	ENSMMUG00000043621	ZNF865	98	85.976	Macaca_mulatta
MGP_CAROLIEiJ_G0029144	-	82	82.986	ENSMNEG00000038220	ZNF865	98	77.457	Macaca_nemestrina
MGP_CAROLIEiJ_G0029144	-	67	39.098	ENSMALG00000004996	-	86	39.098	Monopterus_albus
MGP_CAROLIEiJ_G0029144	-	100	99.471	ENSMUSG00000074405	Zfp865	100	99.471	Mus_musculus
MGP_CAROLIEiJ_G0029144	-	100	98.942	MGP_PahariEiJ_G0021012	-	100	98.942	Mus_pahari
MGP_CAROLIEiJ_G0029144	-	99	98.940	MGP_PahariEiJ_G0021011	-	99	98.940	Mus_pahari
MGP_CAROLIEiJ_G0029144	-	99	99.338	MGP_SPRETEiJ_G0030196	-	99	99.338	Mus_spretus
MGP_CAROLIEiJ_G0029144	-	100	99.339	MGP_SPRETEiJ_G0030197	-	100	99.339	Mus_spretus
MGP_CAROLIEiJ_G0029144	-	99	81.275	ENSNGAG00000016004	Zfp865	99	81.902	Nannospalax_galili
MGP_CAROLIEiJ_G0029144	-	68	46.552	ENSONIG00000007045	-	99	41.989	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029144	-	99	84.544	ENSOGAG00000029406	ZNF865	98	84.231	Otolemur_garnettii
MGP_CAROLIEiJ_G0029144	-	96	73.161	ENSPPRG00000013523	ZNF865	99	76.571	Panthera_pardus
MGP_CAROLIEiJ_G0029144	-	99	93.351	ENSPEMG00000007237	Zfp865	99	93.519	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029144	-	96	70.549	ENSPCIG00000018022	ZNF865	96	72.980	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029144	-	99	84.980	ENSPPYG00000010425	ZNF865	98	85.976	Pongo_abelii
MGP_CAROLIEiJ_G0029144	-	99	98.016	ENSRNOG00000028628	LOC100911196	98	98.016	Rattus_norvegicus
MGP_CAROLIEiJ_G0029144	-	99	82.222	ENSSARG00000013756	ZNF865	83	80.785	Sorex_araneus
MGP_CAROLIEiJ_G0029144	-	67	46.552	ENSSPAG00000001452	-	71	46.552	Stegastes_partitus
MGP_CAROLIEiJ_G0029144	-	99	73.642	ENSSSCG00000029156	ZNF865	99	79.710	Sus_scrofa
MGP_CAROLIEiJ_G0029144	-	67	36.620	ENSTRUG00000024008	-	52	40.000	Takifugu_rubripes
MGP_CAROLIEiJ_G0029144	-	97	75.984	ENSVVUG00000006986	ZNF865	99	92.391	Vulpes_vulpes