EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029218 (Gene tree)
Gene ID: 110297896
Gene Symbol: Nop53
Alias: 9430097C02Rik|Gltscr2
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 9839 bases
Position: chr7:14951987-14961825
Accession: 110297896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077500	Nop53	PF07767.11	1.3e-101	1	1
MGP_CAROLIEiJ_P0077502	Nop53	PF07767.11	1.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077501	-	1791	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077500	-	3128	-	MGP_CAROLIEiJ_P0077500	484 (aa)	XP_021022633	UPI000A3155D8
MGP_CAROLIEiJ_T0077503	-	439	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077502	-	1456	-	MGP_CAROLIEiJ_P0077502	188 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029218	Nop53	100	80.785	ENSG00000105373	NOP53	98	93.827	Homo_sapiens
MGP_CAROLIEiJ_G0029218	Nop53	88	46.404	ENSAPOG00000006446	nop53	97	45.591	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029218	Nop53	99	74.950	ENSAMEG00000015214	NOP53	100	74.950	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029218	Nop53	80	54.000	ENSACIG00000002467	nop53	98	45.028	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029218	Nop53	80	54.667	ENSAOCG00000007002	nop53	97	45.474	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029218	Nop53	88	46.868	ENSAPEG00000024564	nop53	97	45.806	Amphiprion_percula
MGP_CAROLIEiJ_G0029218	Nop53	92	45.695	ENSATEG00000021860	nop53	97	46.358	Anabas_testudineus
MGP_CAROLIEiJ_G0029218	Nop53	99	55.208	ENSACAG00000011362	-	100	56.333	Anolis_carolinensis
MGP_CAROLIEiJ_G0029218	Nop53	99	79.144	ENSANAG00000007933	NOP53	100	73.333	Aotus_nancymaae
MGP_CAROLIEiJ_G0029218	Nop53	88	47.196	ENSACLG00000011832	nop53	97	46.154	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029218	Nop53	88	48.478	ENSAMXG00000014883	nop53	89	48.946	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029218	Nop53	100	79.787	ENSBTAG00000021192	NOP53	91	79.132	Bos_taurus
MGP_CAROLIEiJ_G0029218	Nop53	100	80.372	ENSCJAG00000011385	NOP53	100	80.453	Callithrix_jacchus
MGP_CAROLIEiJ_G0029218	Nop53	99	80.208	ENSCAFG00000004080	NOP53	100	79.794	Canis_familiaris
MGP_CAROLIEiJ_G0029218	Nop53	99	80.214	ENSCHIG00000009393	NOP53	100	79.710	Capra_hircus
MGP_CAROLIEiJ_G0029218	Nop53	98	71.610	ENSTSYG00000036631	NOP53	99	71.042	Carlito_syrichta
MGP_CAROLIEiJ_G0029218	Nop53	99	79.255	ENSCAPG00000013148	NOP53	100	80.597	Cavia_aperea
MGP_CAROLIEiJ_G0029218	Nop53	98	81.303	ENSCPOG00000015665	NOP53	99	81.303	Cavia_porcellus
MGP_CAROLIEiJ_G0029218	Nop53	100	81.405	ENSCCAG00000025477	NOP53	100	81.818	Cebus_capucinus
MGP_CAROLIEiJ_G0029218	Nop53	100	81.612	ENSCATG00000032842	NOP53	100	81.612	Cercocebus_atys
MGP_CAROLIEiJ_G0029218	Nop53	100	79.545	ENSCLAG00000001860	NOP53	100	79.545	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029218	Nop53	100	80.992	ENSCSAG00000002928	NOP53	100	81.405	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029218	Nop53	99	60.428	ENSCPBG00000009047	NOP53	95	59.759	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029218	Nop53	88	32.426	ENSCING00000021395	-	96	32.731	Ciona_intestinalis
MGP_CAROLIEiJ_G0029218	Nop53	100	37.629	ENSCSAVG00000006009	-	95	33.557	Ciona_savignyi
MGP_CAROLIEiJ_G0029218	Nop53	100	80.851	ENSCANG00000039648	NOP53	100	75.207	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029218	Nop53	100	86.777	ENSCGRG00001019033	Nop53	100	86.777	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029218	Nop53	98	45.946	ENSCSEG00000014834	nop53	89	43.274	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029218	Nop53	88	47.926	ENSCVAG00000005940	nop53	97	46.947	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029218	Nop53	99	51.613	ENSDARG00000100452	nop53	100	51.813	Danio_rerio
MGP_CAROLIEiJ_G0029218	Nop53	100	80.319	ENSDNOG00000005165	NOP53	91	80.579	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029218	Nop53	60	81.034	ENSDORG00000016339	-	100	81.034	Dipodomys_ordii
MGP_CAROLIEiJ_G0029218	Nop53	99	72.043	ENSETEG00000003679	-	57	72.072	Echinops_telfairi
MGP_CAROLIEiJ_G0029218	Nop53	95	42.516	ENSEBUG00000012747	nop53	91	44.292	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029218	Nop53	100	79.132	ENSEASG00005004345	NOP53	96	79.545	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029218	Nop53	100	78.756	ENSECAG00000026850	NOP53	96	79.141	Equus_caballus
MGP_CAROLIEiJ_G0029218	Nop53	100	68.802	ENSEEUG00000005287	NOP53	87	93.939	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029218	Nop53	88	50.694	ENSELUG00000001525	nop53	89	51.620	Esox_lucius
MGP_CAROLIEiJ_G0029218	Nop53	100	81.053	ENSFCAG00000010861	NOP53	100	80.041	Felis_catus
MGP_CAROLIEiJ_G0029218	Nop53	99	66.940	ENSFDAG00000010478	NOP53	100	66.598	Fukomys_damarensis
MGP_CAROLIEiJ_G0029218	Nop53	88	48.380	ENSFHEG00000017763	nop53	98	46.122	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029218	Nop53	88	44.471	ENSGMOG00000014299	nop53	88	44.471	Gadus_morhua
MGP_CAROLIEiJ_G0029218	Nop53	96	53.376	ENSGALG00000039473	NOP53	77	53.165	Gallus_gallus
MGP_CAROLIEiJ_G0029218	Nop53	95	44.255	ENSGAFG00000013301	nop53	95	45.551	Gambusia_affinis
MGP_CAROLIEiJ_G0029218	Nop53	80	56.954	ENSGACG00000005766	nop53	96	47.158	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029218	Nop53	99	80.214	ENSGGOG00000005462	NOP53	100	78.261	Gorilla_gorilla
MGP_CAROLIEiJ_G0029218	Nop53	98	71.130	ENSGGOG00000024728	-	100	72.131	Gorilla_gorilla
MGP_CAROLIEiJ_G0029218	Nop53	88	47.664	ENSHBUG00000023625	nop53	97	46.581	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029218	Nop53	99	78.807	ENSHGLG00000018240	NOP53	100	78.807	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029218	Nop53	79	88.189	ENSHGLG00100015613	NOP53	100	88.189	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029218	Nop53	88	44.598	ENSHCOG00000017133	nop53	97	43.460	Hippocampus_comes
MGP_CAROLIEiJ_G0029218	Nop53	84	57.325	ENSIPUG00000008154	nop53	78	52.941	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029218	Nop53	100	83.511	ENSSTOG00000022092	NOP53	100	83.471	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029218	Nop53	99	82.888	ENSJJAG00000007854	Nop53	100	83.437	Jaculus_jaculus
MGP_CAROLIEiJ_G0029218	Nop53	89	45.349	ENSKMAG00000020756	nop53	97	44.420	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029218	Nop53	88	46.404	ENSLBEG00000011432	nop53	97	45.435	Labrus_bergylta
MGP_CAROLIEiJ_G0029218	Nop53	100	57.672	ENSLACG00000018320	NOP53	100	51.442	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029218	Nop53	88	50.939	ENSLOCG00000014178	nop53	88	51.878	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029218	Nop53	100	81.198	ENSMFAG00000045103	NOP53	100	81.612	Macaca_fascicularis
MGP_CAROLIEiJ_G0029218	Nop53	100	81.198	ENSMMUG00000013348	NOP53	98	93.827	Macaca_mulatta
MGP_CAROLIEiJ_G0029218	Nop53	100	80.992	ENSMNEG00000042540	NOP53	96	81.405	Macaca_nemestrina
MGP_CAROLIEiJ_G0029218	Nop53	99	70.287	ENSMLEG00000032475	NOP53	100	70.287	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029218	Nop53	80	58.667	ENSMAMG00000012652	nop53	97	46.709	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029218	Nop53	88	45.647	ENSMZEG00005005033	nop53	96	44.731	Maylandia_zebra
MGP_CAROLIEiJ_G0029218	Nop53	100	85.124	ENSMAUG00000012617	Nop53	100	85.124	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029218	Nop53	99	75.936	ENSMICG00000005580	NOP53	95	78.132	Microcebus_murinus
MGP_CAROLIEiJ_G0029218	Nop53	99	88.820	ENSMOCG00000008367	Nop53	100	88.820	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029218	Nop53	88	46.370	ENSMMOG00000006515	nop53	96	45.824	Mola_mola
MGP_CAROLIEiJ_G0029218	Nop53	100	70.745	ENSMODG00000008721	NOP53	92	68.125	Monodelphis_domestica
MGP_CAROLIEiJ_G0029218	Nop53	95	47.084	ENSMALG00000020350	nop53	92	47.300	Monopterus_albus
MGP_CAROLIEiJ_G0029218	Nop53	100	99.468	ENSMUSG00000041560	Nop53	100	99.380	Mus_musculus
MGP_CAROLIEiJ_G0029218	Nop53	100	96.277	MGP_PahariEiJ_G0021074	-	100	96.277	Mus_pahari
MGP_CAROLIEiJ_G0029218	Nop53	100	98.404	MGP_SPRETEiJ_G0030298	Nop53	100	98.404	Mus_spretus
MGP_CAROLIEiJ_G0029218	Nop53	100	79.218	ENSMPUG00000004456	NOP53	100	79.218	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029218	Nop53	100	92.126	ENSMLUG00000027066	-	100	80.224	Myotis_lucifugus
MGP_CAROLIEiJ_G0029218	Nop53	100	85.802	ENSNGAG00000019894	Nop53	100	85.802	Nannospalax_galili
MGP_CAROLIEiJ_G0029218	Nop53	87	41.882	ENSNBRG00000002057	nop53	93	41.290	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029218	Nop53	93	60.532	ENSNLEG00000028326	-	99	60.976	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029218	Nop53	100	79.877	ENSNLEG00000003143	NOP53	100	81.405	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029218	Nop53	81	66.667	ENSMEUG00000002525	-	100	59.140	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029218	Nop53	99	78.882	ENSODEG00000006707	NOP53	100	79.545	Octodon_degus
MGP_CAROLIEiJ_G0029218	Nop53	88	47.454	ENSONIG00000016624	nop53	97	46.610	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029218	Nop53	93	50.857	ENSORLG00000008659	nop53	96	46.022	Oryzias_latipes
MGP_CAROLIEiJ_G0029218	Nop53	93	50.286	ENSORLG00020019916	nop53	93	43.226	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029218	Nop53	88	47.183	ENSORLG00015001315	nop53	97	47.323	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029218	Nop53	98	50.000	ENSOMEG00000018244	nop53	98	46.973	Oryzias_melastigma
MGP_CAROLIEiJ_G0029218	Nop53	99	61.233	ENSOARG00000011414	NOP53	100	61.233	Ovis_aries
MGP_CAROLIEiJ_G0029218	Nop53	100	79.545	ENSPPAG00000002927	-	100	79.959	Pan_paniscus
MGP_CAROLIEiJ_G0029218	Nop53	99	68.530	ENSPPAG00000032995	-	100	67.288	Pan_paniscus
MGP_CAROLIEiJ_G0029218	Nop53	99	71.277	ENSPPAG00000029337	-	100	70.287	Pan_paniscus
MGP_CAROLIEiJ_G0029218	Nop53	100	80.526	ENSPPRG00000008954	NOP53	100	79.424	Panthera_pardus
MGP_CAROLIEiJ_G0029218	Nop53	99	80.214	ENSPTRG00000043520	-	100	77.433	Pan_troglodytes
MGP_CAROLIEiJ_G0029218	Nop53	99	71.277	ENSPTRG00000052493	-	100	70.492	Pan_troglodytes
MGP_CAROLIEiJ_G0029218	Nop53	100	81.612	ENSPTRG00000011215	NOP53	100	82.025	Pan_troglodytes
MGP_CAROLIEiJ_G0029218	Nop53	100	81.612	ENSPANG00000002964	NOP53	100	82.025	Papio_anubis
MGP_CAROLIEiJ_G0029218	Nop53	88	50.820	ENSPKIG00000000127	nop53	88	50.353	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029218	Nop53	88	47.059	ENSPMGG00000021579	nop53	96	46.237	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029218	Nop53	100	90.702	ENSPEMG00000006856	Nop53	100	90.702	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029218	Nop53	65	59.836	ENSPMAG00000009638	-	100	58.462	Petromyzon_marinus
MGP_CAROLIEiJ_G0029218	Nop53	99	70.053	ENSPCIG00000016718	NOP53	100	65.773	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029218	Nop53	88	48.276	ENSPFOG00000002839	nop53	89	48.157	Poecilia_formosa
MGP_CAROLIEiJ_G0029218	Nop53	88	48.157	ENSPLAG00000006675	nop53	89	48.157	Poecilia_latipinna
MGP_CAROLIEiJ_G0029218	Nop53	88	48.157	ENSPMEG00000009589	nop53	98	46.488	Poecilia_mexicana
MGP_CAROLIEiJ_G0029218	Nop53	88	44.289	ENSPREG00000008711	nop53	96	42.979	Poecilia_reticulata
MGP_CAROLIEiJ_G0029218	Nop53	100	74.127	ENSPPYG00000010181	NOP53	100	75.207	Pongo_abelii
MGP_CAROLIEiJ_G0029218	Nop53	100	78.756	ENSPCAG00000007692	NOP53	100	76.091	Procavia_capensis
MGP_CAROLIEiJ_G0029218	Nop53	89	81.985	ENSPCOG00000016124	NOP53	100	79.452	Propithecus_coquereli
MGP_CAROLIEiJ_G0029218	Nop53	99	77.083	ENSPVAG00000014671	NOP53	84	78.113	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029218	Nop53	88	47.430	ENSPNYG00000001341	nop53	97	46.368	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029218	Nop53	87	55.488	ENSPNAG00000012520	nop53	89	52.235	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029218	Nop53	100	92.975	ENSRNOG00000013023	Nop53	100	92.975	Rattus_norvegicus
MGP_CAROLIEiJ_G0029218	Nop53	100	80.785	ENSRBIG00000036427	NOP53	100	81.198	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029218	Nop53	100	80.992	ENSRROG00000042298	NOP53	100	81.405	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029218	Nop53	100	78.723	ENSSBOG00000033115	NOP53	100	80.041	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029218	Nop53	100	71.809	ENSSHAG00000002239	NOP53	100	67.312	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029218	Nop53	88	51.765	ENSSFOG00015007062	gltscr2	96	49.785	Scleropages_formosus
MGP_CAROLIEiJ_G0029218	Nop53	88	47.796	ENSSMAG00000000212	nop53	89	47.796	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029218	Nop53	88	47.786	ENSSDUG00000010575	nop53	97	47.335	Seriola_dumerili
MGP_CAROLIEiJ_G0029218	Nop53	88	47.430	ENSSLDG00000000140	nop53	94	47.009	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029218	Nop53	99	77.005	ENSSARG00000014109	NOP53	83	82.000	Sorex_araneus
MGP_CAROLIEiJ_G0029218	Nop53	98	60.428	ENSSPUG00000004420	NOP53	98	47.660	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029218	Nop53	88	46.296	ENSSPAG00000000318	nop53	97	45.666	Stegastes_partitus
MGP_CAROLIEiJ_G0029218	Nop53	99	79.144	ENSSSCG00000022774	NOP53	100	77.226	Sus_scrofa
MGP_CAROLIEiJ_G0029218	Nop53	88	46.437	ENSTRUG00000004944	nop53	97	45.359	Takifugu_rubripes
MGP_CAROLIEiJ_G0029218	Nop53	79	89.764	ENSTBEG00000008708	NOP53	80	89.764	Tupaia_belangeri
MGP_CAROLIEiJ_G0029218	Nop53	100	79.058	ENSTTRG00000011831	NOP53	100	78.645	Tursiops_truncatus
MGP_CAROLIEiJ_G0029218	Nop53	99	77.207	ENSUAMG00000028254	NOP53	100	75.359	Ursus_americanus
MGP_CAROLIEiJ_G0029218	Nop53	78	77.749	ENSVVUG00000023365	NOP53	77	76.350	Vulpes_vulpes
MGP_CAROLIEiJ_G0029218	Nop53	93	66.372	ENSXETG00000002782	nop53	99	49.156	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029218	Nop53	98	50.811	ENSXCOG00000004436	nop53	98	47.401	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029218	Nop53	98	50.811	ENSXMAG00000002589	nop53	98	46.721	Xiphophorus_maculatus