EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 15876 bases
Position: chr7:18228086-18243961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077661	KH_1	PF00013.29	3.4e-47	1	3
MGP_CAROLIEiJ_P0077661	KH_1	PF00013.29	3.4e-47	2	3
MGP_CAROLIEiJ_P0077661	KH_1	PF00013.29	3.4e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077661	-	1394	-	MGP_CAROLIEiJ_P0077661	463 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029262	-	54	41.558	MGP_CAROLIEiJ_G0028598	Pcbp1	66	41.558
MGP_CAROLIEiJ_G0029262	-	100	67.951	MGP_CAROLIEiJ_G0017728	Nova1	59	74.086
MGP_CAROLIEiJ_G0029262	-	100	100.000	MGP_CAROLIEiJ_G0029261	-	100	100.000
MGP_CAROLIEiJ_G0029262	-	58	41.538	MGP_CAROLIEiJ_G0032623	Pcbp4	76	41.538
MGP_CAROLIEiJ_G0029262	-	52	40.845	MGP_CAROLIEiJ_G0015475	Pcbp3	69	40.351
MGP_CAROLIEiJ_G0029262	-	53	41.096	MGP_CAROLIEiJ_G0020353	Pcbp2	68	41.096
MGP_CAROLIEiJ_G0029262	-	51	36.765	MGP_CAROLIEiJ_G0025740	Fubp1	65	30.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSG00000104967	NOVA2	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0029262	-	67	100.000	ENSAMEG00000000649	NOVA2	84	100.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029262	-	100	81.023	ENSACAG00000003724	NOVA2	61	89.531	Anolis_carolinensis
MGP_CAROLIEiJ_G0029262	-	100	83.585	ENSANAG00000022520	NOVA2	54	84.477	Aotus_nancymaae
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSBTAG00000013157	NOVA2	94	98.488	Bos_taurus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCJAG00000012121	NOVA2	84	98.488	Callithrix_jacchus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCAFG00000004359	NOVA2	93	98.488	Canis_familiaris
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCAFG00020001763	NOVA2	63	98.488	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCHIG00000010547	NOVA2	84	98.488	Capra_hircus
MGP_CAROLIEiJ_G0029262	-	73	100.000	ENSCPOG00000020582	NOVA2	90	100.000	Cavia_porcellus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCCAG00000037311	NOVA2	83	98.488	Cebus_capucinus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSCATG00000045122	NOVA2	94	98.488	Cercocebus_atys
MGP_CAROLIEiJ_G0029262	-	59	99.038	ENSCLAG00000000991	-	71	99.038	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029262	-	100	94.816	ENSCSAG00000003105	NOVA2	91	94.816	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029262	-	99	82.227	ENSCPBG00000007153	NOVA2	57	90.614	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029262	-	98	44.534	ENSCSAVG00000009137	-	88	61.176	Ciona_savignyi
MGP_CAROLIEiJ_G0029262	-	100	99.784	ENSCGRG00001013374	Nova2	85	99.784	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSDNOG00000031258	NOVA2	94	98.488	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029262	-	100	100.000	ENSDORG00000026568	Nova2	89	100.000	Dipodomys_ordii
MGP_CAROLIEiJ_G0029262	-	71	55.556	ENSEBUG00000004758	-	82	55.556	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029262	-	100	63.948	ENSEBUG00000012405	NOVA2	61	68.817	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSEASG00005014236	NOVA2	96	98.488	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029262	-	60	81.227	ENSECAG00000024041	NOVA2	82	87.473	Equus_caballus
MGP_CAROLIEiJ_G0029262	-	100	98.056	ENSFCAG00000024784	NOVA2	94	98.056	Felis_catus
MGP_CAROLIEiJ_G0029262	-	100	82.303	ENSGAGG00000009498	NOVA2	61	90.614	Gopherus_agassizii
MGP_CAROLIEiJ_G0029262	-	100	94.206	ENSGGOG00000000325	NOVA2	100	94.206	Gorilla_gorilla
MGP_CAROLIEiJ_G0029262	-	100	89.849	ENSHGLG00000016103	NOVA2	88	89.849	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029262	-	62	100.000	ENSHGLG00100015153	NOVA2	100	100.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029262	-	100	98.272	ENSSTOG00000022126	NOVA2	99	98.272	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029262	-	71	97.980	ENSJJAG00000000944	Nova2	100	100.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0029262	-	100	95.699	ENSLAFG00000025917	NOVA2	100	95.699	Loxodonta_africana
MGP_CAROLIEiJ_G0029262	-	79	100.000	ENSMFAG00000043672	NOVA2	72	100.000	Macaca_fascicularis
MGP_CAROLIEiJ_G0029262	-	100	82.937	ENSMMUG00000004085	NOVA2	61	99.639	Macaca_mulatta
MGP_CAROLIEiJ_G0029262	-	100	95.896	ENSMNEG00000040253	NOVA2	82	95.464	Macaca_nemestrina
MGP_CAROLIEiJ_G0029262	-	100	100.000	ENSMLEG00000030389	NOVA2	96	100.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029262	-	100	90.497	ENSMAUG00000014038	Nova2	93	90.497	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029262	-	100	98.704	ENSMICG00000028720	NOVA2	94	98.704	Microcebus_murinus
MGP_CAROLIEiJ_G0029262	-	100	100.000	ENSMOCG00000018489	Nova2	87	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029262	-	60	90.357	ENSMODG00000021529	NOVA2	75	90.714	Monodelphis_domestica
MGP_CAROLIEiJ_G0029262	-	100	100.000	ENSMUSG00000030411	Nova2	94	100.000	Mus_musculus
MGP_CAROLIEiJ_G0029262	-	100	100.000	MGP_PahariEiJ_G0021122	-	94	100.000	Mus_pahari
MGP_CAROLIEiJ_G0029262	-	100	100.000	MGP_PahariEiJ_G0021121	-	89	100.000	Mus_pahari
MGP_CAROLIEiJ_G0029262	-	100	100.000	MGP_SPRETEiJ_G0030345	-	84	100.000	Mus_spretus
MGP_CAROLIEiJ_G0029262	-	100	100.000	MGP_SPRETEiJ_G0030346	-	94	100.000	Mus_spretus
MGP_CAROLIEiJ_G0029262	-	62	97.753	ENSMPUG00000005444	NOVA2	91	97.753	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029262	-	76	100.000	ENSNGAG00000014104	Nova2	88	100.000	Nannospalax_galili
MGP_CAROLIEiJ_G0029262	-	81	87.908	ENSNLEG00000002399	-	100	87.908	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029262	-	59	94.805	ENSMEUG00000000562	NOVA2	62	95.238	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029262	-	65	99.038	ENSOPRG00000010051	NOVA2	68	100.000	Ochotona_princeps
MGP_CAROLIEiJ_G0029262	-	100	89.201	ENSODEG00000008485	NOVA2	90	89.201	Octodon_degus
MGP_CAROLIEiJ_G0029262	-	100	84.665	ENSOCUG00000022891	NOVA2	86	100.000	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSOGAG00000028973	NOVA2	90	98.488	Otolemur_garnettii
MGP_CAROLIEiJ_G0029262	-	62	100.000	ENSOARG00000010434	-	72	100.000	Ovis_aries
MGP_CAROLIEiJ_G0029262	-	100	97.189	ENSPPAG00000035049	-	98	100.000	Pan_paniscus
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSPPRG00000005941	NOVA2	95	98.488	Panthera_pardus
MGP_CAROLIEiJ_G0029262	-	65	100.000	ENSPTIG00000015368	NOVA2	64	100.000	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSPTRG00000011173	NOVA2	94	98.488	Pan_troglodytes
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSPANG00000023868	NOVA2	96	98.488	Papio_anubis
MGP_CAROLIEiJ_G0029262	-	59	95.070	ENSPSIG00000006125	-	85	95.070	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029262	-	76	95.699	ENSPCIG00000007632	NOVA2	57	96.057	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029262	-	89	91.748	ENSPPYG00000010139	-	99	91.748	Pongo_abelii
MGP_CAROLIEiJ_G0029262	-	100	98.488	ENSPCOG00000022693	NOVA2	97	98.488	Propithecus_coquereli
MGP_CAROLIEiJ_G0029262	-	100	94.384	ENSPVAG00000006169	NOVA2	96	94.384	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029262	-	100	99.568	ENSRNOG00000013847	Nova2	95	99.568	Rattus_norvegicus
MGP_CAROLIEiJ_G0029262	-	68	100.000	ENSRROG00000037399	NOVA2	70	100.000	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029262	-	59	85.039	ENSSBOG00000001000	-	70	85.039	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029262	-	100	71.762	ENSSPUG00000002591	NOVA2	91	88.542	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029262	-	100	98.272	ENSSSCG00000035029	NOVA2	94	98.272	Sus_scrofa
MGP_CAROLIEiJ_G0029262	-	100	80.714	ENSTRUG00000019498	NOVA2	89	87.500	Takifugu_rubripes
MGP_CAROLIEiJ_G0029262	-	97	96.314	ENSTTRG00000001612	NOVA2	94	96.314	Tursiops_truncatus
MGP_CAROLIEiJ_G0029262	-	76	99.639	ENSUAMG00000015647	NOVA2	62	99.639	Ursus_americanus
MGP_CAROLIEiJ_G0029262	-	100	57.479	ENSXETG00000019101	nova2	83	81.443	Xenopus_tropicalis