EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029267 (Gene tree)
Gene ID: 110299508
Gene Symbol: Sympk
Alias: 1500016F02Rik|4632415H16Rik
Full Name: symplekin
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 30203 bases
Position: chr7:18309881-18340083
Accession: 110299508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077668	Symplekin_C	PF12295.8	1.4e-73	1	1
MGP_CAROLIEiJ_P0077674	Symplekin_C	PF12295.8	5.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077668	-	4105	XM_021169219	MGP_CAROLIEiJ_P0077668	1280 (aa)	XP_021024878	UPI000A318171
MGP_CAROLIEiJ_T0077669	-	712	-	MGP_CAROLIEiJ_P0077669	198 (aa)	-	UPI00015AA482
MGP_CAROLIEiJ_T0077675	-	636	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077674	-	482	-	MGP_CAROLIEiJ_P0077674	142 (aa)	-	-
MGP_CAROLIEiJ_T0077673	-	1088	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077672	-	799	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077671	-	4762	-	MGP_CAROLIEiJ_P0077671	234 (aa)	-	UPI000333526D
MGP_CAROLIEiJ_T0077670	-	4480	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSAPOG00000015934	sympk	97	73.550	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.531	ENSAMEG00000000680	SYMPK	100	93.531	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSACIG00000006357	sympk	92	74.544	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSAOCG00000024124	sympk	92	74.380	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSAPEG00000003465	sympk	92	73.422	Amphiprion_percula
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSATEG00000008472	sympk	91	74.350	Anabas_testudineus
MGP_CAROLIEiJ_G0029267	Sympk	77	96.330	ENSACAG00000004126	SYMPK	97	78.831	Anolis_carolinensis
MGP_CAROLIEiJ_G0029267	Sympk	100	93.920	ENSANAG00000021087	SYMPK	100	99.200	Aotus_nancymaae
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSACLG00000001813	sympk	91	74.147	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSAMXG00000013677	sympk	91	73.684	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029267	Sympk	100	92.985	ENSBTAG00000012101	SYMPK	100	93.219	Bos_taurus
MGP_CAROLIEiJ_G0029267	Sympk	95	97.009	ENSCJAG00000012172	SYMPK	99	95.861	Callithrix_jacchus
MGP_CAROLIEiJ_G0029267	Sympk	100	94.076	ENSCAFG00000004376	SYMPK	100	93.920	Canis_familiaris
MGP_CAROLIEiJ_G0029267	Sympk	100	94.076	ENSCAFG00020001815	SYMPK	100	93.920	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	ENSCHIG00000026784	SYMPK	100	93.375	Capra_hircus
MGP_CAROLIEiJ_G0029267	Sympk	100	94.154	ENSTSYG00000006268	SYMPK	100	97.600	Carlito_syrichta
MGP_CAROLIEiJ_G0029267	Sympk	83	94.653	ENSCAPG00000005112	SYMPK	96	94.653	Cavia_aperea
MGP_CAROLIEiJ_G0029267	Sympk	100	89.938	ENSCPOG00000010434	SYMPK	100	89.706	Cavia_porcellus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.687	ENSCCAG00000036309	SYMPK	100	99.200	Cebus_capucinus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.843	ENSCATG00000045107	SYMPK	100	98.400	Cercocebus_atys
MGP_CAROLIEiJ_G0029267	Sympk	100	93.219	ENSCLAG00000001206	SYMPK	100	93.453	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029267	Sympk	100	93.843	ENSCSAG00000003115	SYMPK	100	93.925	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029267	Sympk	77	99.083	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029267	Sympk	98	82.952	ENSCPBG00000007170	SYMPK	99	83.492	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029267	Sympk	77	64.220	ENSCING00000021232	-	96	48.918	Ciona_intestinalis
MGP_CAROLIEiJ_G0029267	Sympk	77	63.303	ENSCSAVG00000005154	-	100	47.887	Ciona_savignyi
MGP_CAROLIEiJ_G0029267	Sympk	100	91.486	ENSCANG00000040907	SYMPK	100	98.400	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029267	Sympk	92	95.006	ENSCGRG00001010086	Sympk	100	95.006	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029267	Sympk	77	84.404	ENSCSEG00000016802	sympk	97	69.934	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSCVAG00000015093	sympk	81	73.415	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSDARG00000059553	sympk	89	73.256	Danio_rerio
MGP_CAROLIEiJ_G0029267	Sympk	99	92.773	ENSDNOG00000016149	SYMPK	98	92.773	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029267	Sympk	78	54.955	FBgn0037371	Sym	95	36.356	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029267	Sympk	77	81.651	ENSEBUG00000000387	sympk	89	62.558	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029267	Sympk	100	93.302	ENSEASG00005014227	SYMPK	100	93.769	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.302	ENSECAG00000008163	SYMPK	100	93.769	Equus_caballus
MGP_CAROLIEiJ_G0029267	Sympk	77	98.165	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSELUG00000000850	sympk	88	75.157	Esox_lucius
MGP_CAROLIEiJ_G0029267	Sympk	98	97.764	ENSFCAG00000007337	SYMPK	100	93.843	Felis_catus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.224	ENSFDAG00000011272	SYMPK	100	93.302	Fukomys_damarensis
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSFHEG00000010274	sympk	90	74.750	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029267	Sympk	97	71.329	ENSGMOG00000002357	sympk	99	72.970	Gadus_morhua
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSGAFG00000010976	sympk	91	74.977	Gambusia_affinis
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSGACG00000002735	sympk	98	74.587	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029267	Sympk	77	95.413	ENSGAGG00000012538	-	88	84.580	Gopherus_agassizii
MGP_CAROLIEiJ_G0029267	Sympk	100	93.453	ENSGGOG00000003410	SYMPK	100	98.400	Gorilla_gorilla
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSHBUG00000023564	sympk	91	74.485	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029267	Sympk	100	89.564	ENSHGLG00000005228	SYMPK	100	89.564	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029267	Sympk	100	88.889	ENSHGLG00100018571	SYMPK	100	88.889	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSHCOG00000017400	sympk	91	70.486	Hippocampus_comes
MGP_CAROLIEiJ_G0029267	Sympk	77	88.073	ENSIPUG00000024020	SYMPK	95	69.630	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029267	Sympk	100	94.466	ENSSTOG00000001534	SYMPK	100	94.466	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.458	ENSJJAG00000006633	Sympk	100	93.458	Jaculus_jaculus
MGP_CAROLIEiJ_G0029267	Sympk	77	84.404	ENSKMAG00000016292	sympk	99	69.967	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029267	Sympk	77	88.073	ENSLBEG00000027913	sympk	96	70.785	Labrus_bergylta
MGP_CAROLIEiJ_G0029267	Sympk	77	93.578	ENSLACG00000016497	SYMPK	100	71.068	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029267	Sympk	100	93.219	ENSLAFG00000008726	SYMPK	100	93.375	Loxodonta_africana
MGP_CAROLIEiJ_G0029267	Sympk	77	99.083	ENSMFAG00000030093	-	90	89.370	Macaca_fascicularis
MGP_CAROLIEiJ_G0029267	Sympk	100	93.843	ENSMMUG00000015428	SYMPK	100	98.400	Macaca_mulatta
MGP_CAROLIEiJ_G0029267	Sympk	100	93.998	ENSMNEG00000019439	SYMPK	100	98.400	Macaca_nemestrina
MGP_CAROLIEiJ_G0029267	Sympk	100	93.998	ENSMLEG00000040508	SYMPK	100	98.400	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSMAMG00000010486	sympk	89	74.679	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSMZEG00005014146	sympk	91	74.147	Maylandia_zebra
MGP_CAROLIEiJ_G0029267	Sympk	100	94.766	ENSMAUG00000015657	Sympk	100	94.766	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	ENSMICG00000001871	SYMPK	100	96.800	Microcebus_murinus
MGP_CAROLIEiJ_G0029267	Sympk	100	97.578	ENSMOCG00000008388	Sympk	100	97.578	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSMMOG00000019227	sympk	93	72.636	Mola_mola
MGP_CAROLIEiJ_G0029267	Sympk	97	87.601	ENSMODG00000021534	SYMPK	96	87.811	Monodelphis_domestica
MGP_CAROLIEiJ_G0029267	Sympk	73	69.574	ENSMALG00000008347	sympk	96	69.894	Monopterus_albus
MGP_CAROLIEiJ_G0029267	Sympk	100	100.000	ENSMUSG00000023118	Sympk	100	99.068	Mus_musculus
MGP_CAROLIEiJ_G0029267	Sympk	100	99.062	MGP_PahariEiJ_G0021127	Sympk	100	99.062	Mus_pahari
MGP_CAROLIEiJ_G0029267	Sympk	100	99.296	MGP_SPRETEiJ_G0030351	-	100	99.296	Mus_spretus
MGP_CAROLIEiJ_G0029267	Sympk	100	92.128	ENSMPUG00000005505	SYMPK	100	92.128	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029267	Sympk	77	99.083	ENSMLUG00000001359	SYMPK	100	90.128	Myotis_lucifugus
MGP_CAROLIEiJ_G0029267	Sympk	100	95.547	ENSNGAG00000000820	Sympk	100	95.625	Nannospalax_galili
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSNBRG00000018101	sympk	92	75.070	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029267	Sympk	100	80.435	ENSNLEG00000002369	SYMPK	100	80.823	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029267	Sympk	77	98.165	ENSMEUG00000003866	SYMPK	80	89.474	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029267	Sympk	100	91.199	ENSOPRG00000009967	SYMPK	100	91.433	Ochotona_princeps
MGP_CAROLIEiJ_G0029267	Sympk	100	94.081	ENSODEG00000007519	SYMPK	100	93.847	Octodon_degus
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSONIG00000016802	sympk	96	73.874	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029267	Sympk	75	96.788	ENSOCUG00000005511	SYMPK	90	96.788	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSORLG00000015338	sympk	96	74.340	Oryzias_latipes
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSORLG00020004402	sympk	90	75.389	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSORLG00015005712	sympk	90	75.480	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSOMEG00000022561	sympk	90	75.092	Oryzias_melastigma
MGP_CAROLIEiJ_G0029267	Sympk	100	94.310	ENSOGAG00000013483	SYMPK	100	94.388	Otolemur_garnettii
MGP_CAROLIEiJ_G0029267	Sympk	100	88.554	ENSOARG00000010349	SYMPK	100	88.554	Ovis_aries
MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	ENSPPAG00000043204	SYMPK	100	98.400	Pan_paniscus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.765	ENSPPRG00000004282	SYMPK	100	93.843	Panthera_pardus
MGP_CAROLIEiJ_G0029267	Sympk	100	91.504	ENSPTIG00000015420	SYMPK	94	97.764	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	ENSPTRG00000011169	SYMPK	100	98.400	Pan_troglodytes
MGP_CAROLIEiJ_G0029267	Sympk	100	93.765	ENSPANG00000019930	SYMPK	100	98.400	Papio_anubis
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSPKIG00000017132	sympk	96	72.564	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029267	Sympk	100	97.502	ENSPEMG00000007564	Sympk	100	97.502	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029267	Sympk	77	84.404	ENSPMAG00000004936	sympk	100	65.580	Petromyzon_marinus
MGP_CAROLIEiJ_G0029267	Sympk	98	87.008	ENSPCIG00000024476	SYMPK	99	86.258	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSPFOG00000001194	sympk	97	71.464	Poecilia_formosa
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSPLAG00000012995	sympk	97	71.381	Poecilia_latipinna
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSPMEG00000008099	sympk	90	74.819	Poecilia_mexicana
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSPREG00000006176	sympk	90	75.068	Poecilia_reticulata
MGP_CAROLIEiJ_G0029267	Sympk	87	97.122	ENSPPYG00000010135	SYMPK	99	97.122	Pongo_abelii
MGP_CAROLIEiJ_G0029267	Sympk	94	89.880	ENSPCAG00000005182	SYMPK	94	89.880	Procavia_capensis
MGP_CAROLIEiJ_G0029267	Sympk	100	94.076	ENSPCOG00000023740	SYMPK	100	98.400	Propithecus_coquereli
MGP_CAROLIEiJ_G0029267	Sympk	98	93.109	ENSPVAG00000001355	SYMPK	100	93.189	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	ENSPNYG00000011455	sympk	90	74.396	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029267	Sympk	90	73.087	ENSPNAG00000016505	sympk	89	75.179	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029267	Sympk	100	98.594	ENSRNOG00000014353	Sympk	100	98.594	Rattus_norvegicus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.074	ENSRBIG00000040963	SYMPK	100	98.400	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029267	Sympk	100	93.920	ENSRROG00000024834	SYMPK	97	97.763	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029267	Sympk	100	93.687	ENSSBOG00000034497	SYMPK	100	99.200	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029267	Sympk	90	90.078	ENSSHAG00000003139	SYMPK	99	90.078	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSSFOG00015006974	sympk	90	75.914	Scleropages_formosus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSSMAG00000018130	sympk	72	74.273	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029267	Sympk	93	70.432	ENSSDUG00000007092	sympk	91	74.101	Seriola_dumerili
MGP_CAROLIEiJ_G0029267	Sympk	93	70.432	ENSSLDG00000014774	sympk	96	71.757	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029267	Sympk	77	99.083	ENSSARG00000004274	-	66	100.000	Sorex_araneus
MGP_CAROLIEiJ_G0029267	Sympk	97	81.508	ENSSPUG00000002789	SYMPK	96	81.610	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	ENSSPAG00000000854	sympk	90	74.368	Stegastes_partitus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.843	ENSSSCG00000003093	SYMPK	100	93.843	Sus_scrofa
MGP_CAROLIEiJ_G0029267	Sympk	87	74.038	ENSTRUG00000010202	sympk	91	74.167	Takifugu_rubripes
MGP_CAROLIEiJ_G0029267	Sympk	77	83.486	ENSTNIG00000017855	sympk	98	73.333	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029267	Sympk	88	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
MGP_CAROLIEiJ_G0029267	Sympk	100	85.503	ENSTTRG00000014311	SYMPK	100	85.503	Tursiops_truncatus
MGP_CAROLIEiJ_G0029267	Sympk	100	91.582	ENSUAMG00000022272	SYMPK	95	97.018	Ursus_americanus
MGP_CAROLIEiJ_G0029267	Sympk	100	93.687	ENSUMAG00000023698	SYMPK	100	93.765	Ursus_maritimus
MGP_CAROLIEiJ_G0029267	Sympk	89	96.147	ENSVVUG00000003024	SYMPK	99	96.147	Vulpes_vulpes
MGP_CAROLIEiJ_G0029267	Sympk	90	72.193	ENSXETG00000024453	sympk	94	72.280	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029267	Sympk	78	84.685	ENSXCOG00000015368	sympk	100	74.191	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	ENSXMAG00000005737	sympk	97	71.537	Xiphophorus_maculatus