EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029299 (Gene tree)
Gene ID: 110298564
Gene Symbol: Clasrp
Alias: SWAP2|Sfrs16|Srsf16
Full Name: CLK4 associating serine/arginine rich protein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 23574 bases
Position: chr7:18876818-18900391
Accession: 110298564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077792	DRY_EERY	PF09750.9	3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077792	-	2143	XM_021167889	MGP_CAROLIEiJ_P0077792	668 (aa)	XP_021023548	UPI000A314752

Gene Model

Click here to download MGP_CAROLIEiJ_G0029299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSG00000104859	CLASRP	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0029299	Clasrp	51	82.840	ENSAPOG00000016578	clasrp	59	83.136	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029299	Clasrp	96	74.625	ENSAMEG00000012638	CLASRP	50	100.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.793	ENSACIG00000014149	clasrp	53	82.840	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029299	Clasrp	51	82.840	ENSAOCG00000005893	clasrp	58	83.136	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.921	ENSAPEG00000024441	clasrp	59	83.136	Amphiprion_percula
MGP_CAROLIEiJ_G0029299	Clasrp	51	83.728	ENSATEG00000013691	clasrp	59	84.024	Anabas_testudineus
MGP_CAROLIEiJ_G0029299	Clasrp	96	76.212	ENSACAG00000004151	CLASRP	52	92.604	Anolis_carolinensis
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.873	ENSANAG00000023127	CLASRP	100	92.741	Aotus_nancymaae
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.473	ENSACLG00000016357	clasrp	58	84.024	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029299	Clasrp	51	99.408	ENSBTAG00000013697	CLASRP	100	93.175	Bos_taurus
MGP_CAROLIEiJ_G0029299	Clasrp	68	99.000	ENSCJAG00000012926	CLASRP	100	93.195	Callithrix_jacchus
MGP_CAROLIEiJ_G0029299	Clasrp	57	95.833	ENSCAFG00000004587	CLASRP	81	95.833	Canis_familiaris
MGP_CAROLIEiJ_G0029299	Clasrp	51	92.442	ENSCHIG00000024252	CLASRP	88	83.258	Capra_hircus
MGP_CAROLIEiJ_G0029299	Clasrp	53	99.155	ENSTSYG00000012066	CLASRP	100	96.154	Carlito_syrichta
MGP_CAROLIEiJ_G0029299	Clasrp	51	98.817	ENSCAPG00000014238	CLASRP	53	98.817	Cavia_aperea
MGP_CAROLIEiJ_G0029299	Clasrp	51	98.817	ENSCPOG00000010282	CLASRP	100	92.285	Cavia_porcellus
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.864	ENSCCAG00000029385	CLASRP	100	92.296	Cebus_capucinus
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.592	ENSCATG00000040827	CLASRP	100	92.899	Cercocebus_atys
MGP_CAROLIEiJ_G0029299	Clasrp	51	99.112	ENSCLAG00000002206	CLASRP	100	92.996	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029299	Clasrp	57	95.573	ENSCSAG00000003231	CLASRP	78	97.838	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029299	Clasrp	53	91.854	ENSCPBG00000014391	CLASRP	70	92.899	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029299	Clasrp	50	38.710	ENSCSAVG00000002630	-	87	40.068	Ciona_savignyi
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.592	ENSCANG00000028388	CLASRP	100	92.478	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029299	Clasrp	100	98.204	ENSCGRG00001015861	Clasrp	100	98.204	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029299	Clasrp	53	80.226	ENSCSEG00000016914	clasrp	59	82.249	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029299	Clasrp	53	79.379	ENSCVAG00000004010	clasrp	59	81.657	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029299	Clasrp	51	81.471	ENSDARG00000061742	clasrp	52	81.416	Danio_rerio
MGP_CAROLIEiJ_G0029299	Clasrp	100	77.093	ENSDNOG00000039537	CLASRP	55	82.480	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029299	Clasrp	100	91.168	ENSDORG00000003450	Clasrp	54	99.718	Dipodomys_ordii
MGP_CAROLIEiJ_G0029299	Clasrp	98	53.256	ENSEBUG00000013993	clasrp	54	64.820	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029299	Clasrp	60	98.438	ENSECAG00000009232	CLASRP	75	99.652	Equus_caballus
MGP_CAROLIEiJ_G0029299	Clasrp	68	75.140	ENSELUG00000014585	clasrp	51	83.136	Esox_lucius
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.873	ENSFCAG00000033941	CLASRP	100	91.740	Felis_catus
MGP_CAROLIEiJ_G0029299	Clasrp	51	79.882	ENSFHEG00000006269	clasrp	91	81.065	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029299	Clasrp	63	82.555	ENSGMOG00000007125	clasrp	67	82.555	Gadus_morhua
MGP_CAROLIEiJ_G0029299	Clasrp	50	79.641	ENSGACG00000009826	clasrp	50	81.734	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSGGOG00000003384	CLASRP	100	93.323	Gorilla_gorilla
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.473	ENSHBUG00000002053	clasrp	65	71.942	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029299	Clasrp	56	97.574	ENSHGLG00000019534	CLASRP	100	88.972	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029299	Clasrp	56	92.992	ENSHGLG00100012344	CLASRP	100	86.140	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029299	Clasrp	51	81.065	ENSHCOG00000007529	clasrp	59	80.769	Hippocampus_comes
MGP_CAROLIEiJ_G0029299	Clasrp	51	80.826	ENSIPUG00000011928	clasrp	52	81.361	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029299	Clasrp	51	100.000	ENSSTOG00000009069	CLASRP	96	95.606	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029299	Clasrp	51	81.361	ENSKMAG00000020973	clasrp	58	81.657	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.638	ENSLBEG00000021054	clasrp	52	83.136	Labrus_bergylta
MGP_CAROLIEiJ_G0029299	Clasrp	51	86.550	ENSLACG00000000893	CLASRP	53	87.278	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.754	ENSLOCG00000014647	clasrp	56	80.214	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029299	Clasrp	100	96.567	ENSLAFG00000008075	CLASRP	100	96.567	Loxodonta_africana
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSMFAG00000032121	CLASRP	100	92.751	Macaca_fascicularis
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.592	ENSMMUG00000014155	CLASRP	100	92.899	Macaca_mulatta
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSMNEG00000000043	CLASRP	100	92.899	Macaca_nemestrina
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.592	ENSMLEG00000034161	CLASRP	100	89.941	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.356	ENSMAMG00000011689	clasrp	51	83.432	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.473	ENSMZEG00005016696	clasrp	50	84.024	Maylandia_zebra
MGP_CAROLIEiJ_G0029299	Clasrp	100	97.605	ENSMAUG00000000378	Clasrp	100	97.605	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029299	Clasrp	68	94.978	ENSMICG00000006996	CLASRP	100	95.846	Microcebus_murinus
MGP_CAROLIEiJ_G0029299	Clasrp	100	97.455	ENSMOCG00000007548	Clasrp	100	97.455	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029299	Clasrp	66	80.755	ENSMMOG00000012523	clasrp	72	85.000	Mola_mola
MGP_CAROLIEiJ_G0029299	Clasrp	100	86.009	ENSMODG00000020854	CLASRP	100	81.858	Monodelphis_domestica
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.073	ENSMALG00000012365	clasrp	71	83.136	Monopterus_albus
MGP_CAROLIEiJ_G0029299	Clasrp	100	99.551	ENSMUSG00000061028	Clasrp	100	99.551	Mus_musculus
MGP_CAROLIEiJ_G0029299	Clasrp	100	99.551	MGP_PahariEiJ_G0021159	Clasrp	100	99.551	Mus_pahari
MGP_CAROLIEiJ_G0029299	Clasrp	100	99.551	MGP_SPRETEiJ_G0030383	Clasrp	100	99.551	Mus_spretus
MGP_CAROLIEiJ_G0029299	Clasrp	51	96.491	ENSMLUG00000002165	CLASRP	100	91.471	Myotis_lucifugus
MGP_CAROLIEiJ_G0029299	Clasrp	100	93.592	ENSNGAG00000016249	Clasrp	100	93.592	Nannospalax_galili
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.473	ENSNBRG00000004382	clasrp	68	84.024	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029299	Clasrp	53	79.255	ENSNLEG00000001811	CLASRP	100	76.446	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029299	Clasrp	56	84.615	ENSMEUG00000009998	CLASRP	100	80.119	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029299	Clasrp	51	98.817	ENSOPRG00000008066	CLASRP	100	92.113	Ochotona_princeps
MGP_CAROLIEiJ_G0029299	Clasrp	51	98.817	ENSODEG00000008407	CLASRP	100	91.976	Octodon_degus
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.193	ENSONIG00000003756	clasrp	51	83.728	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029299	Clasrp	51	98.817	ENSOCUG00000004711	CLASRP	78	93.452	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.921	ENSORLG00000006568	clasrp	53	81.953	Oryzias_latipes
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.921	ENSORLG00020003213	clasrp	54	81.525	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.638	ENSORLG00015005655	clasrp	54	81.232	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029299	Clasrp	53	81.638	ENSOMEG00000013102	clasrp	51	81.953	Oryzias_melastigma
MGP_CAROLIEiJ_G0029299	Clasrp	68	93.873	ENSOGAG00000034160	CLASRP	100	92.047	Otolemur_garnettii
MGP_CAROLIEiJ_G0029299	Clasrp	51	99.408	ENSOARG00000009616	CLASRP	53	96.919	Ovis_aries
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSPPAG00000040215	CLASRP	100	92.741	Pan_paniscus
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.873	ENSPPRG00000017479	CLASRP	100	93.037	Panthera_pardus
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSPTRG00000022583	CLASRP	100	92.899	Pan_troglodytes
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.592	ENSPANG00000012804	CLASRP	100	92.899	Papio_anubis
MGP_CAROLIEiJ_G0029299	Clasrp	51	84.366	ENSPKIG00000011266	clasrp	73	78.947	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029299	Clasrp	100	73.185	ENSPSIG00000013177	CLASRP	52	90.533	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029299	Clasrp	66	77.522	ENSPMGG00000014094	clasrp	77	79.121	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029299	Clasrp	100	98.204	ENSPEMG00000017845	Clasrp	100	98.204	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029299	Clasrp	56	93.386	ENSPCIG00000022909	CLASRP	100	86.350	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029299	Clasrp	57	74.869	ENSPFOG00000010596	clasrp	51	80.826	Poecilia_formosa
MGP_CAROLIEiJ_G0029299	Clasrp	53	78.531	ENSPLAG00000019619	clasrp	86	81.065	Poecilia_latipinna
MGP_CAROLIEiJ_G0029299	Clasrp	51	79.882	ENSPMEG00000016136	clasrp	50	81.065	Poecilia_mexicana
MGP_CAROLIEiJ_G0029299	Clasrp	53	75.623	ENSPREG00000001075	clasrp	56	77.681	Poecilia_reticulata
MGP_CAROLIEiJ_G0029299	Clasrp	53	98.310	ENSPPYG00000010104	CLASRP	100	91.259	Pongo_abelii
MGP_CAROLIEiJ_G0029299	Clasrp	100	83.136	ENSPCAG00000010871	CLASRP	100	82.988	Procavia_capensis
MGP_CAROLIEiJ_G0029299	Clasrp	69	94.647	ENSPCOG00000018016	CLASRP	100	95.428	Propithecus_coquereli
MGP_CAROLIEiJ_G0029299	Clasrp	68	95.633	ENSPVAG00000015954	CLASRP	100	96.006	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029299	Clasrp	53	83.473	ENSPNYG00000006221	clasrp	60	84.024	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029299	Clasrp	53	77.465	ENSPNAG00000019075	clasrp	52	74.260	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029299	Clasrp	100	99.102	ENSRNOG00000046000	Clasrp	100	99.102	Rattus_norvegicus
MGP_CAROLIEiJ_G0029299	Clasrp	100	88.462	ENSRROG00000045419	CLASRP	100	88.462	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029299	Clasrp	53	92.458	ENSSHAG00000004444	-	74	90.836	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029299	Clasrp	51	84.661	ENSSFOG00015006361	clasrp	52	84.615	Scleropages_formosus
MGP_CAROLIEiJ_G0029299	Clasrp	53	80.791	ENSSMAG00000013333	clasrp	53	82.249	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029299	Clasrp	53	82.436	ENSSLDG00000020726	clasrp	58	83.728	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029299	Clasrp	84	74.648	ENSSPUG00000010734	CLASRP	61	91.420	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029299	Clasrp	53	82.203	ENSSPAG00000008665	clasrp	51	83.432	Stegastes_partitus
MGP_CAROLIEiJ_G0029299	Clasrp	51	80.769	ENSTRUG00000009842	clasrp	85	81.361	Takifugu_rubripes
MGP_CAROLIEiJ_G0029299	Clasrp	51	79.825	ENSTNIG00000007734	clasrp	51	81.361	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029299	Clasrp	62	100.000	ENSTBEG00000001906	CLASRP	88	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0029299	Clasrp	60	96.584	ENSUMAG00000023392	CLASRP	91	94.785	Ursus_maritimus
MGP_CAROLIEiJ_G0029299	Clasrp	63	98.438	ENSVVUG00000008161	CLASRP	82	98.361	Vulpes_vulpes
MGP_CAROLIEiJ_G0029299	Clasrp	96	67.075	ENSXETG00000019073	clasrp	50	85.503	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029299	Clasrp	51	79.586	ENSXMAG00000018599	clasrp	51	80.769	Xiphophorus_maculatus