EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029322 (Gene tree)
Gene ID: -
Gene Symbol: Zfp235
Alias: 0610030O19Rik
Full Name: zinc finger protein 235
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9240 bases
Position: chr7:23405007-23414246
Accession: 1929117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	1	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	2	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	3	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	4	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	5	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	6	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	7	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	8	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	9	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	10	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	11	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	12	13
MGP_CAROLIEiJ_P0077871	zf-C2H2	PF00096.26	6.6e-79	13	13
MGP_CAROLIEiJ_P0077871	zf-met	PF12874.7	1.1e-07	1	2
MGP_CAROLIEiJ_P0077871	zf-met	PF12874.7	1.1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077866	-	1921	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077867	-	1312	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077871	-	3371	-	MGP_CAROLIEiJ_P0077871	702 (aa)	-	-
MGP_CAROLIEiJ_T0077870	-	1040	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0077868	-	1329	-	MGP_CAROLIEiJ_P0077868	331 (aa)	-	-
MGP_CAROLIEiJ_T0077869	-	494	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029322	Zfp235	72	36.761	MGP_CAROLIEiJ_G0024724	Zfp64	89	47.525
MGP_CAROLIEiJ_G0029322	Zfp235	72	38.123	MGP_CAROLIEiJ_G0028463	Prdm5	73	44.286
MGP_CAROLIEiJ_G0029322	Zfp235	62	37.421	MGP_CAROLIEiJ_G0031420	Zfp319	91	37.416
MGP_CAROLIEiJ_G0029322	Zfp235	70	40.972	MGP_CAROLIEiJ_G0022445	Zfp236	69	40.972
MGP_CAROLIEiJ_G0029322	Zfp235	99	57.098	MGP_CAROLIEiJ_G0019949	Zfp251	96	57.098
MGP_CAROLIEiJ_G0029322	Zfp235	61	37.905	MGP_CAROLIEiJ_G0029135	Zfp628	61	36.884
MGP_CAROLIEiJ_G0029322	Zfp235	66	38.258	MGP_CAROLIEiJ_G0020389	Zfp597	65	45.370
MGP_CAROLIEiJ_G0029322	Zfp235	68	53.191	MGP_CAROLIEiJ_G0031579	Zfp1	79	53.191
MGP_CAROLIEiJ_G0029322	Zfp235	67	34.559	MGP_CAROLIEiJ_G0028343	Repin1	98	46.591
MGP_CAROLIEiJ_G0029322	Zfp235	99	51.637	MGP_CAROLIEiJ_G0016306	Zfp354a	98	49.289
MGP_CAROLIEiJ_G0029322	Zfp235	99	49.420	MGP_CAROLIEiJ_G0021128	Zfp51	94	49.420
MGP_CAROLIEiJ_G0029322	Zfp235	62	51.852	MGP_CAROLIEiJ_G0029356	Zfp574	93	45.652
MGP_CAROLIEiJ_G0029322	Zfp235	72	56.553	MGP_CAROLIEiJ_G0029490	Zfp420	99	56.553
MGP_CAROLIEiJ_G0029322	Zfp235	99	46.094	MGP_CAROLIEiJ_G0029614	Zfp715	95	46.094
MGP_CAROLIEiJ_G0029322	Zfp235	76	47.769	MGP_CAROLIEiJ_G0029612	Zfp141	69	47.769
MGP_CAROLIEiJ_G0029322	Zfp235	66	48.503	MGP_CAROLIEiJ_G0024901	Mynn	55	48.503
MGP_CAROLIEiJ_G0029322	Zfp235	99	42.389	MGP_CAROLIEiJ_G0031203	Zfp882	99	43.544
MGP_CAROLIEiJ_G0029322	Zfp235	71	44.248	MGP_CAROLIEiJ_G0026744	Zbtb17	62	42.949
MGP_CAROLIEiJ_G0029322	Zfp235	99	51.987	MGP_CAROLIEiJ_G0021132	Zfp948	98	46.911
MGP_CAROLIEiJ_G0029322	Zfp235	61	48.031	MGP_CAROLIEiJ_G0027508	Gfi1	100	48.031
MGP_CAROLIEiJ_G0029322	Zfp235	71	50.862	MGP_CAROLIEiJ_G0018274	Zkscan4	57	50.862
MGP_CAROLIEiJ_G0029322	Zfp235	99	55.072	MGP_CAROLIEiJ_G0029329	Zfp94	97	55.072
MGP_CAROLIEiJ_G0029322	Zfp235	94	66.390	MGP_CAROLIEiJ_G0029324	Zfp111	99	67.621
MGP_CAROLIEiJ_G0029322	Zfp235	100	63.353	MGP_CAROLIEiJ_G0029326	Zfp108	99	72.985
MGP_CAROLIEiJ_G0029322	Zfp235	94	75.240	MGP_CAROLIEiJ_G0029327	Zfp93	99	76.198
MGP_CAROLIEiJ_G0029322	Zfp235	100	57.007	MGP_CAROLIEiJ_G0029321	Zfp112	99	61.398
MGP_CAROLIEiJ_G0029322	Zfp235	67	49.804	MGP_CAROLIEiJ_G0030502	-	65	49.804
MGP_CAROLIEiJ_G0029322	Zfp235	67	49.804	MGP_CAROLIEiJ_G0030501	Zfp764	65	49.804
MGP_CAROLIEiJ_G0029322	Zfp235	79	55.949	MGP_CAROLIEiJ_G0018683	Zfp493	96	55.949
MGP_CAROLIEiJ_G0029322	Zfp235	99	48.589	MGP_CAROLIEiJ_G0015655	-	80	48.589
MGP_CAROLIEiJ_G0029322	Zfp235	60	37.647	MGP_CAROLIEiJ_G0028031	Gtf3a	78	37.647
MGP_CAROLIEiJ_G0029322	Zfp235	99	43.655	MGP_CAROLIEiJ_G0029427	-	98	43.655
MGP_CAROLIEiJ_G0029322	Zfp235	99	35.904	MGP_CAROLIEiJ_G0018661	Zfp759	100	35.904
MGP_CAROLIEiJ_G0029322	Zfp235	72	55.862	MGP_CAROLIEiJ_G0018660	-	61	55.862
MGP_CAROLIEiJ_G0029322	Zfp235	71	55.755	MGP_CAROLIEiJ_G0030498	Zfp768	61	55.714
MGP_CAROLIEiJ_G0029322	Zfp235	62	42.532	MGP_CAROLIEiJ_G0016391	Zfp672	98	50.000
MGP_CAROLIEiJ_G0029322	Zfp235	67	40.316	MGP_CAROLIEiJ_G0029143	-	82	39.749
MGP_CAROLIEiJ_G0029322	Zfp235	62	37.791	MGP_CAROLIEiJ_G0029146	Zfp784	65	48.214
MGP_CAROLIEiJ_G0029322	Zfp235	99	54.054	MGP_CAROLIEiJ_G0024261	Zfp661	96	54.054
MGP_CAROLIEiJ_G0029322	Zfp235	83	48.509	MGP_CAROLIEiJ_G0016437	Zfp867	96	48.509
MGP_CAROLIEiJ_G0029322	Zfp235	61	52.632	MGP_CAROLIEiJ_G0027176	Zbtb49	62	50.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029322	Zfp235	100	50.351	ENSG00000159915	ZNF233	99	46.619	Homo_sapiens
MGP_CAROLIEiJ_G0029322	Zfp235	100	53.285	ENSAMEG00000006122	ZNF233	99	52.120	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.629	ENSCATG00000015076	ZNF233	98	51.629	Cercocebus_atys
MGP_CAROLIEiJ_G0029322	Zfp235	99	51.869	ENSCSAG00000003326	ZNF233	99	51.869	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029322	Zfp235	100	55.750	ENSCHOG00000010443	ZNF233	99	50.962	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029322	Zfp235	100	64.889	ENSCANG00000032081	ZNF233	99	64.889	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029322	Zfp235	100	56.135	ENSCGRG00000015629	-	100	57.001	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029322	Zfp235	99	56.904	ENSCGRG00000015809	-	99	56.904	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029322	Zfp235	99	56.623	ENSDNOG00000038729	ZNF233	99	56.623	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029322	Zfp235	61	54.217	ENSFALG00000009044	-	100	54.217	Ficedula_albicollis
MGP_CAROLIEiJ_G0029322	Zfp235	93	51.522	ENSGGOG00000013940	ZNF233	93	45.329	Gorilla_gorilla
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.799	ENSMFAG00000039215	ZNF233	99	51.493	Macaca_fascicularis
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.559	ENSMMUG00000012797	ZNF233	99	51.244	Macaca_mulatta
MGP_CAROLIEiJ_G0029322	Zfp235	72	56.422	ENSMZEG00005024630	-	83	56.422	Maylandia_zebra
MGP_CAROLIEiJ_G0029322	Zfp235	100	52.048	ENSMICG00000016725	ZNF233	98	47.605	Microcebus_murinus
MGP_CAROLIEiJ_G0029322	Zfp235	95	77.530	ENSMUSG00000055305	Zfp93	99	78.274	Mus_musculus
MGP_CAROLIEiJ_G0029322	Zfp235	100	97.863	ENSMUSG00000047603	Zfp235	100	97.863	Mus_musculus
MGP_CAROLIEiJ_G0029322	Zfp235	99	67.045	ENSMUSG00000068962	Zfp114	99	68.182	Mus_musculus
MGP_CAROLIEiJ_G0029322	Zfp235	100	64.148	ENSMUSG00000030486	Zfp108	99	76.000	Mus_musculus
MGP_CAROLIEiJ_G0029322	Zfp235	89	74.641	MGP_PahariEiJ_G0021178	Zfp93	99	77.009	Mus_pahari
MGP_CAROLIEiJ_G0029322	Zfp235	100	96.724	MGP_PahariEiJ_G0021173	Zfp235	100	96.724	Mus_pahari
MGP_CAROLIEiJ_G0029322	Zfp235	100	73.926	MGP_PahariEiJ_G0021177	Zfp108	99	74.851	Mus_pahari
MGP_CAROLIEiJ_G0029322	Zfp235	99	69.318	MGP_SPRETEiJ_G0030417	Zfp114	99	69.318	Mus_spretus
MGP_CAROLIEiJ_G0029322	Zfp235	100	64.444	MGP_SPRETEiJ_G0030420	Zfp108	99	76.453	Mus_spretus
MGP_CAROLIEiJ_G0029322	Zfp235	70	76.734	MGP_SPRETEiJ_G0030421	-	99	78.076	Mus_spretus
MGP_CAROLIEiJ_G0029322	Zfp235	100	98.291	MGP_SPRETEiJ_G0030416	Zfp235	100	98.291	Mus_spretus
MGP_CAROLIEiJ_G0029322	Zfp235	68	54.422	ENSORLG00000027054	-	51	54.422	Oryzias_latipes
MGP_CAROLIEiJ_G0029322	Zfp235	68	54.422	ENSORLG00015017539	-	89	54.286	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029322	Zfp235	99	52.311	ENSOGAG00000001912	ZNF233	100	51.392	Otolemur_garnettii
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.054	ENSPPAG00000030145	ZNF233	99	44.368	Pan_paniscus
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.288	ENSPTRG00000011111	ZNF233	99	44.643	Pan_troglodytes
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.288	ENSPANG00000010670	ZNF233	99	60.517	Papio_anubis
MGP_CAROLIEiJ_G0029322	Zfp235	99	83.357	ENSPEMG00000018022	-	99	83.357	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.756	ENSPPYG00000010085	ZNF233	98	47.157	Pongo_abelii
MGP_CAROLIEiJ_G0029322	Zfp235	99	52.644	ENSPCOG00000015292	ZNF233	99	50.136	Propithecus_coquereli
MGP_CAROLIEiJ_G0029322	Zfp235	93	53.125	ENSPVAG00000004388	ZNF233	85	53.125	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.288	ENSRBIG00000035218	ZNF233	99	44.536	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.288	ENSRROG00000030619	ZNF233	99	60.517	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029322	Zfp235	100	51.163	ENSTTRG00000011818	ZNF233	99	51.163	Tursiops_truncatus
MGP_CAROLIEiJ_G0029322	Zfp235	93	53.286	ENSUMAG00000023065	ZNF233	96	49.883	Ursus_maritimus
MGP_CAROLIEiJ_G0029322	Zfp235	100	50.245	ENSVPAG00000007465	ZNF233	99	50.245	Vicugna_pacos
MGP_CAROLIEiJ_G0029322	Zfp235	61	52.198	ENSXMAG00000027300	-	71	52.198	Xiphophorus_maculatus