EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029326 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 7718 bases
Position: chr7:23521819-23529536
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	1	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	2	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	3	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	4	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	5	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	6	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	7	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	8	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	9	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	10	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	11	12
MGP_CAROLIEiJ_P0077880	zf-C2H2	PF00096.26	1.1e-67	12	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	1	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	2	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	3	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	4	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	5	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	6	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	7	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	8	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	9	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	10	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	11	12
MGP_CAROLIEiJ_P0077879	zf-C2H2	PF00096.26	1.2e-67	12	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	1	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	2	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	3	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	4	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	5	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	6	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	7	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	8	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	9	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	10	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	11	12
MGP_CAROLIEiJ_P0077881	zf-C2H2	PF00096.26	1.3e-67	12	12
MGP_CAROLIEiJ_P0077880	zf-met	PF12874.7	9.3e-10	1	1
MGP_CAROLIEiJ_P0077879	zf-met	PF12874.7	1e-09	1	1
MGP_CAROLIEiJ_P0077881	zf-met	PF12874.7	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0077880	-	2506	-	MGP_CAROLIEiJ_P0077880	636 (aa)	-	-
MGP_CAROLIEiJ_T0077879	-	2555	-	MGP_CAROLIEiJ_P0077879	641 (aa)	-	-
MGP_CAROLIEiJ_T0077881	-	2291	-	MGP_CAROLIEiJ_P0077881	645 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029326	Zfp108	72	40.751	MGP_CAROLIEiJ_G0031420	Zfp319	91	36.740
MGP_CAROLIEiJ_G0029326	Zfp108	72	54.762	MGP_CAROLIEiJ_G0018274	Zkscan4	61	54.762
MGP_CAROLIEiJ_G0029326	Zfp108	72	58.537	MGP_CAROLIEiJ_G0029612	Zfp141	61	58.537
MGP_CAROLIEiJ_G0029326	Zfp108	81	54.348	MGP_CAROLIEiJ_G0029614	Zfp715	72	54.348
MGP_CAROLIEiJ_G0029326	Zfp108	100	46.247	MGP_CAROLIEiJ_G0021128	Zfp51	95	47.281
MGP_CAROLIEiJ_G0029326	Zfp108	69	41.494	MGP_CAROLIEiJ_G0016391	Zfp672	98	48.780
MGP_CAROLIEiJ_G0029326	Zfp108	66	43.200	MGP_CAROLIEiJ_G0028463	Prdm5	81	43.200
MGP_CAROLIEiJ_G0029326	Zfp108	66	36.604	MGP_CAROLIEiJ_G0028343	Repin1	92	37.425
MGP_CAROLIEiJ_G0029326	Zfp108	98	43.797	MGP_CAROLIEiJ_G0018661	Zfp759	99	43.797
MGP_CAROLIEiJ_G0029326	Zfp108	59	44.231	MGP_CAROLIEiJ_G0022445	Zfp236	66	44.231
MGP_CAROLIEiJ_G0029326	Zfp108	66	49.485	MGP_CAROLIEiJ_G0029135	Zfp628	61	48.503
MGP_CAROLIEiJ_G0029326	Zfp108	78	51.163	MGP_CAROLIEiJ_G0016437	Zfp867	95	51.163
MGP_CAROLIEiJ_G0029326	Zfp108	73	54.023	MGP_CAROLIEiJ_G0029490	Zfp420	99	53.512
MGP_CAROLIEiJ_G0029326	Zfp108	58	38.528	MGP_CAROLIEiJ_G0024724	Zfp64	73	35.172
MGP_CAROLIEiJ_G0029326	Zfp108	99	44.800	MGP_CAROLIEiJ_G0021132	Zfp948	99	46.326
MGP_CAROLIEiJ_G0029326	Zfp108	66	46.332	MGP_CAROLIEiJ_G0030502	-	68	46.332
MGP_CAROLIEiJ_G0029326	Zfp108	66	46.332	MGP_CAROLIEiJ_G0030501	Zfp764	68	46.332
MGP_CAROLIEiJ_G0029326	Zfp108	99	44.932	MGP_CAROLIEiJ_G0031203	Zfp882	99	42.202
MGP_CAROLIEiJ_G0029326	Zfp108	59	37.097	MGP_CAROLIEiJ_G0014667	Zbtb41	52	34.412
MGP_CAROLIEiJ_G0029326	Zfp108	58	35.238	MGP_CAROLIEiJ_G0029146	Zfp784	68	34.211
MGP_CAROLIEiJ_G0029326	Zfp108	66	40.444	MGP_CAROLIEiJ_G0029143	-	81	38.281
MGP_CAROLIEiJ_G0029326	Zfp108	77	55.000	MGP_CAROLIEiJ_G0018683	Zfp493	95	55.000
MGP_CAROLIEiJ_G0029326	Zfp108	100	52.055	MGP_CAROLIEiJ_G0016306	Zfp354a	99	52.055
MGP_CAROLIEiJ_G0029326	Zfp108	78	57.143	MGP_CAROLIEiJ_G0015655	-	86	57.143
MGP_CAROLIEiJ_G0029326	Zfp108	69	47.321	MGP_CAROLIEiJ_G0020389	Zfp597	63	47.321
MGP_CAROLIEiJ_G0029326	Zfp108	69	50.427	MGP_CAROLIEiJ_G0027508	Gfi1	100	50.427
MGP_CAROLIEiJ_G0029326	Zfp108	69	53.957	MGP_CAROLIEiJ_G0030498	Zfp768	51	53.957
MGP_CAROLIEiJ_G0029326	Zfp108	99	55.043	MGP_CAROLIEiJ_G0029329	Zfp94	97	58.333
MGP_CAROLIEiJ_G0029326	Zfp108	99	58.656	MGP_CAROLIEiJ_G0029321	Zfp112	99	58.656
MGP_CAROLIEiJ_G0029326	Zfp108	99	72.985	MGP_CAROLIEiJ_G0029322	Zfp235	100	63.353
MGP_CAROLIEiJ_G0029326	Zfp108	94	64.000	MGP_CAROLIEiJ_G0029324	Zfp111	99	56.421
MGP_CAROLIEiJ_G0029326	Zfp108	94	78.904	MGP_CAROLIEiJ_G0029327	Zfp93	99	78.904
MGP_CAROLIEiJ_G0029326	Zfp108	99	46.322	MGP_CAROLIEiJ_G0029427	-	98	46.322
MGP_CAROLIEiJ_G0029326	Zfp108	66	48.469	MGP_CAROLIEiJ_G0027176	Zbtb49	59	49.296
MGP_CAROLIEiJ_G0029326	Zfp108	99	54.514	MGP_CAROLIEiJ_G0019949	Zfp251	96	53.097
MGP_CAROLIEiJ_G0029326	Zfp108	78	59.091	MGP_CAROLIEiJ_G0031579	Zfp1	90	59.091
MGP_CAROLIEiJ_G0029326	Zfp108	78	53.216	MGP_CAROLIEiJ_G0018660	-	77	53.216
MGP_CAROLIEiJ_G0029326	Zfp108	69	36.816	MGP_CAROLIEiJ_G0029356	Zfp574	93	42.857
MGP_CAROLIEiJ_G0029326	Zfp108	99	47.876	MGP_CAROLIEiJ_G0024261	Zfp661	96	47.876

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029326	Zfp108	99	47.283	ENSG00000159915	ZNF233	99	45.359	Homo_sapiens
MGP_CAROLIEiJ_G0029326	Zfp108	99	49.415	ENSAMEG00000006122	ZNF233	99	50.558	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029326	Zfp108	99	51.682	ENSCATG00000015076	ZNF233	99	49.346	Cercocebus_atys
MGP_CAROLIEiJ_G0029326	Zfp108	99	50.435	ENSCSAG00000003326	ZNF233	99	50.435	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029326	Zfp108	99	52.500	ENSCHOG00000010443	ZNF233	99	52.500	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029326	Zfp108	99	50.518	ENSCANG00000032081	ZNF233	99	51.688	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029326	Zfp108	96	58.106	ENSCGRG00000015629	-	92	58.106	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029326	Zfp108	99	57.741	ENSCGRG00000015809	-	99	57.741	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029326	Zfp108	99	45.824	ENSDNOG00000038729	ZNF233	99	51.412	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029326	Zfp108	64	51.852	ENSFALG00000009044	-	100	54.762	Ficedula_albicollis
MGP_CAROLIEiJ_G0029326	Zfp108	93	50.183	ENSGGOG00000013940	ZNF233	96	50.183	Gorilla_gorilla
MGP_CAROLIEiJ_G0029326	Zfp108	99	51.235	ENSMFAG00000039215	ZNF233	99	51.673	Macaca_fascicularis
MGP_CAROLIEiJ_G0029326	Zfp108	99	52.045	ENSMMUG00000012797	ZNF233	99	52.045	Macaca_mulatta
MGP_CAROLIEiJ_G0029326	Zfp108	82	54.774	ENSMZEG00005024630	-	99	54.774	Maylandia_zebra
MGP_CAROLIEiJ_G0029326	Zfp108	99	54.762	ENSMICG00000016725	ZNF233	98	54.762	Microcebus_murinus
MGP_CAROLIEiJ_G0029326	Zfp108	99	94.548	ENSMUSG00000030486	Zfp108	100	94.548	Mus_musculus
MGP_CAROLIEiJ_G0029326	Zfp108	99	72.239	ENSMUSG00000047603	Zfp235	100	62.611	Mus_musculus
MGP_CAROLIEiJ_G0029326	Zfp108	99	80.343	ENSMUSG00000055305	Zfp93	100	80.155	Mus_musculus
MGP_CAROLIEiJ_G0029326	Zfp108	99	68.537	ENSMUSG00000068962	Zfp114	99	68.537	Mus_musculus
MGP_CAROLIEiJ_G0029326	Zfp108	93	77.258	MGP_PahariEiJ_G0021178	Zfp93	99	82.578	Mus_pahari
MGP_CAROLIEiJ_G0029326	Zfp108	100	89.028	MGP_PahariEiJ_G0021177	Zfp108	100	89.028	Mus_pahari
MGP_CAROLIEiJ_G0029326	Zfp108	99	73.174	MGP_PahariEiJ_G0021173	Zfp235	100	63.501	Mus_pahari
MGP_CAROLIEiJ_G0029326	Zfp108	100	95.801	MGP_SPRETEiJ_G0030420	Zfp108	100	95.801	Mus_spretus
MGP_CAROLIEiJ_G0029326	Zfp108	70	83.532	MGP_SPRETEiJ_G0030421	-	99	83.532	Mus_spretus
MGP_CAROLIEiJ_G0029326	Zfp108	91	64.763	MGP_SPRETEiJ_G0030417	Zfp114	99	64.448	Mus_spretus
MGP_CAROLIEiJ_G0029326	Zfp108	99	74.328	MGP_SPRETEiJ_G0030416	Zfp235	100	62.463	Mus_spretus
MGP_CAROLIEiJ_G0029326	Zfp108	66	54.018	ENSORLG00015017539	-	69	53.704	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029326	Zfp108	99	47.041	ENSOGAG00000001912	ZNF233	100	47.041	Otolemur_garnettii
MGP_CAROLIEiJ_G0029326	Zfp108	99	53.160	ENSPPAG00000030145	ZNF233	99	53.160	Pan_paniscus
MGP_CAROLIEiJ_G0029326	Zfp108	99	53.160	ENSPTRG00000011111	ZNF233	99	53.160	Pan_troglodytes
MGP_CAROLIEiJ_G0029326	Zfp108	99	51.258	ENSPANG00000010670	ZNF233	99	52.416	Papio_anubis
MGP_CAROLIEiJ_G0029326	Zfp108	99	73.134	ENSPEMG00000018022	-	100	61.128	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029326	Zfp108	99	50.725	ENSPPYG00000010085	ZNF233	97	51.106	Pongo_abelii
MGP_CAROLIEiJ_G0029326	Zfp108	99	44.428	ENSPCOG00000015292	ZNF233	99	49.584	Propithecus_coquereli
MGP_CAROLIEiJ_G0029326	Zfp108	77	68.889	ENSPVAG00000004388	ZNF233	79	68.889	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029326	Zfp108	99	50.549	ENSRBIG00000035218	ZNF233	99	50.435	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029326	Zfp108	99	51.258	ENSRROG00000030619	ZNF233	99	53.160	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029326	Zfp108	99	45.787	ENSTTRG00000011818	ZNF233	99	55.390	Tursiops_truncatus
MGP_CAROLIEiJ_G0029326	Zfp108	93	54.817	ENSUMAG00000023065	ZNF233	97	50.294	Ursus_maritimus
MGP_CAROLIEiJ_G0029326	Zfp108	99	63.679	ENSVPAG00000007465	ZNF233	100	63.679	Vicugna_pacos
MGP_CAROLIEiJ_G0029326	Zfp108	61	50.273	ENSXMAG00000027300	-	73	50.273	Xiphophorus_maculatus