EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029441 (Gene tree)
Gene ID: 110299510
Gene Symbol: Supt5
Alias: Spt5|Supt5h
Full Name: SPT5 homolog%2C DSIF elongation factor subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 25870 bases
Position: chr7:27513059-27538928
Accession: 110299510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0078349	KOW	PF00467.29	5.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0078348	-	3529	-	MGP_CAROLIEiJ_P0078348	1079 (aa)	-	-
MGP_CAROLIEiJ_T0078349	-	3504	XM_021169225	MGP_CAROLIEiJ_P0078349	1083 (aa)	XP_021024884	UPI000A3178E2

Gene Model

Click here to download MGP_CAROLIEiJ_G0029441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSG00000196235	SUPT5H	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0029441	Supt5	94	81.594	ENSAPOG00000012970	supt5h	96	81.693	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSAMEG00000008382	SUPT5H	100	97.426	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029441	Supt5	94	67.483	ENSACIG00000021245	supt5h	93	69.344	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029441	Supt5	94	86.489	ENSAOCG00000001136	supt5h	96	85.280	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029441	Supt5	94	81.988	ENSAPEG00000021060	supt5h	96	81.970	Amphiprion_percula
MGP_CAROLIEiJ_G0029441	Supt5	94	88.166	ENSATEG00000002626	supt5h	99	85.728	Anabas_testudineus
MGP_CAROLIEiJ_G0029441	Supt5	100	92.521	ENSACAG00000000375	SUPT5H	100	92.521	Anolis_carolinensis
MGP_CAROLIEiJ_G0029441	Supt5	100	97.335	ENSANAG00000033469	SUPT5H	100	97.335	Aotus_nancymaae
MGP_CAROLIEiJ_G0029441	Supt5	94	85.236	ENSACLG00000011374	supt5h	95	85.236	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029441	Supt5	94	89.282	ENSAMXG00000009128	supt5h	99	87.142	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSBTAG00000010467	SUPT5H	100	97.426	Bos_taurus
MGP_CAROLIEiJ_G0029441	Supt5	88	39.490	WBGene00005015	spt-5	90	39.388	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSCJAG00000014182	SUPT5H	100	97.426	Callithrix_jacchus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSCAFG00000005469	SUPT5H	100	97.518	Canis_familiaris
MGP_CAROLIEiJ_G0029441	Supt5	98	95.274	ENSCAFG00020015732	SUPT5H	99	96.627	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSCHIG00000023821	SUPT5H	100	97.426	Capra_hircus
MGP_CAROLIEiJ_G0029441	Supt5	99	96.355	ENSTSYG00000010636	SUPT5H	99	96.355	Carlito_syrichta
MGP_CAROLIEiJ_G0029441	Supt5	98	95.579	ENSCAPG00000008285	SUPT5H	100	95.579	Cavia_aperea
MGP_CAROLIEiJ_G0029441	Supt5	100	97.335	ENSCPOG00000011367	SUPT5H	100	97.335	Cavia_porcellus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSCCAG00000034052	SUPT5H	100	97.426	Cebus_capucinus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSCATG00000035589	SUPT5H	100	97.518	Cercocebus_atys
MGP_CAROLIEiJ_G0029441	Supt5	100	97.243	ENSCLAG00000013796	SUPT5H	100	97.243	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSCSAG00000003826	SUPT5H	100	97.518	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029441	Supt5	99	93.228	ENSCPBG00000018792	SUPT5H	100	95.764	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029441	Supt5	94	58.624	ENSCING00000021624	-	93	61.156	Ciona_intestinalis
MGP_CAROLIEiJ_G0029441	Supt5	99	60.614	ENSCSAVG00000000030	-	99	58.868	Ciona_savignyi
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSCANG00000043752	SUPT5H	100	97.518	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029441	Supt5	100	98.802	ENSCGRG00001012522	Supt5	100	98.802	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029441	Supt5	98	99.056	ENSCGRG00000006779	Supt5	97	99.056	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029441	Supt5	71	67.922	ENSCSEG00000017151	-	94	67.662	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029441	Supt5	94	80.859	ENSCSEG00000015699	supt5h	97	81.384	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029441	Supt5	94	87.132	ENSCVAG00000007501	supt5h	94	86.719	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029441	Supt5	94	88.627	ENSDARG00000042724	supt5h	99	86.334	Danio_rerio
MGP_CAROLIEiJ_G0029441	Supt5	96	97.230	ENSDNOG00000033920	SUPT5H	100	97.230	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029441	Supt5	100	90.749	ENSDORG00000016582	Supt5	100	91.767	Dipodomys_ordii
MGP_CAROLIEiJ_G0029441	Supt5	94	54.012	FBgn0040273	Spt5	90	54.219	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029441	Supt5	54	95.000	ENSETEG00000009497	-	54	95.000	Echinops_telfairi
MGP_CAROLIEiJ_G0029441	Supt5	89	75.648	ENSEBUG00000011892	supt5h	99	75.440	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029441	Supt5	100	96.587	ENSEASG00005011861	SUPT5H	100	97.186	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029441	Supt5	100	96.679	ENSECAG00000013309	SUPT5H	100	97.571	Equus_caballus
MGP_CAROLIEiJ_G0029441	Supt5	98	87.240	ENSEEUG00000012879	SUPT5H	97	86.778	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029441	Supt5	98	86.617	ENSELUG00000011402	supt5h	98	87.266	Esox_lucius
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSFCAG00000010744	SUPT5H	100	97.426	Felis_catus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.243	ENSFDAG00000015803	SUPT5H	100	97.243	Fukomys_damarensis
MGP_CAROLIEiJ_G0029441	Supt5	94	85.785	ENSFHEG00000012497	supt5h	95	85.686	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029441	Supt5	99	72.544	ENSGMOG00000003422	supt5h	93	74.027	Gadus_morhua
MGP_CAROLIEiJ_G0029441	Supt5	97	79.528	ENSGACG00000004934	supt5h	99	79.121	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029441	Supt5	92	94.753	ENSGAGG00000019112	SUPT5H	99	95.871	Gopherus_agassizii
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSGGOG00000014425	SUPT5H	100	97.417	Gorilla_gorilla
MGP_CAROLIEiJ_G0029441	Supt5	94	88.310	ENSHBUG00000017144	supt5h	94	88.310	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029441	Supt5	100	97.335	ENSHGLG00000018339	SUPT5H	100	97.335	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029441	Supt5	100	96.691	ENSHGLG00100017126	SUPT5H	100	96.691	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029441	Supt5	94	86.346	ENSHCOG00000004932	supt5h	94	86.444	Hippocampus_comes
MGP_CAROLIEiJ_G0029441	Supt5	94	89.240	ENSIPUG00000007308	supt5h	94	89.240	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSSTOG00000026638	SUPT5H	100	97.426	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029441	Supt5	100	98.803	ENSJJAG00000022374	Supt5	100	98.803	Jaculus_jaculus
MGP_CAROLIEiJ_G0029441	Supt5	94	84.593	ENSKMAG00000004401	supt5h	94	84.691	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029441	Supt5	100	89.483	ENSLACG00000008663	SUPT5H	100	89.483	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029441	Supt5	84	78.495	ENSLOCG00000014703	SUPT5H	87	91.825	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029441	Supt5	100	93.407	ENSLAFG00000027736	SUPT5H	100	93.407	Loxodonta_africana
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSMFAG00000038707	SUPT5H	100	97.518	Macaca_fascicularis
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSMMUG00000019372	SUPT5H	100	97.518	Macaca_mulatta
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSMNEG00000041553	SUPT5H	100	97.518	Macaca_nemestrina
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSMLEG00000036432	SUPT5H	100	97.518	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029441	Supt5	94	87.783	ENSMAMG00000019715	supt5h	94	88.211	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029441	Supt5	94	88.137	ENSMZEG00005024864	supt5h	94	88.137	Maylandia_zebra
MGP_CAROLIEiJ_G0029441	Supt5	94	95.294	ENSMGAG00000012449	SUPT5H	100	93.364	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029441	Supt5	100	93.981	ENSMAUG00000009006	Supt5	100	94.074	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSMICG00000006115	SUPT5H	100	97.426	Microcebus_murinus
MGP_CAROLIEiJ_G0029441	Supt5	100	99.170	ENSMOCG00000012211	Supt5	100	99.170	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029441	Supt5	94	86.476	ENSMMOG00000009770	supt5h	97	85.967	Mola_mola
MGP_CAROLIEiJ_G0029441	Supt5	94	88.510	ENSMODG00000013570	SUPT5H	99	88.867	Monodelphis_domestica
MGP_CAROLIEiJ_G0029441	Supt5	99	85.886	ENSMALG00000017833	supt5h	96	87.081	Monopterus_albus
MGP_CAROLIEiJ_G0029441	Supt5	100	99.723	ENSMUSG00000003435	Supt5	100	99.723	Mus_musculus
MGP_CAROLIEiJ_G0029441	Supt5	100	99.538	MGP_PahariEiJ_G0012677	Supt5	100	99.538	Mus_pahari
MGP_CAROLIEiJ_G0029441	Supt5	100	99.908	MGP_SPRETEiJ_G0030539	Supt5	100	99.908	Mus_spretus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSMPUG00000017721	SUPT5H	100	97.426	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029441	Supt5	100	90.859	ENSMLUG00000008079	-	95	93.333	Myotis_lucifugus
MGP_CAROLIEiJ_G0029441	Supt5	100	96.970	ENSMLUG00000013886	-	100	96.970	Myotis_lucifugus
MGP_CAROLIEiJ_G0029441	Supt5	100	99.078	ENSNGAG00000022458	Supt5	100	99.078	Nannospalax_galili
MGP_CAROLIEiJ_G0029441	Supt5	80	80.867	ENSNBRG00000005030	supt5h	71	80.867	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029441	Supt5	98	94.423	ENSNLEG00000014365	SUPT5H	99	95.265	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029441	Supt5	93	89.851	ENSMEUG00000016423	SUPT5H	99	90.020	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029441	Supt5	97	92.550	ENSOPRG00000016844	SUPT5H	100	92.168	Ochotona_princeps
MGP_CAROLIEiJ_G0029441	Supt5	100	97.151	ENSODEG00000016445	SUPT5H	100	97.151	Octodon_degus
MGP_CAROLIEiJ_G0029441	Supt5	94	88.114	ENSONIG00000001100	supt5h	94	88.114	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029441	Supt5	81	91.166	ENSOANG00000008175	SUPT5H	100	90.487	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029441	Supt5	100	96.956	ENSOCUG00000002155	SUPT5H	100	96.956	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029441	Supt5	94	86.726	ENSORLG00000000394	supt5h	94	86.726	Oryzias_latipes
MGP_CAROLIEiJ_G0029441	Supt5	94	86.824	ENSORLG00020021680	supt5h	94	86.824	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029441	Supt5	94	86.824	ENSORLG00015010686	supt5h	94	86.824	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029441	Supt5	100	97.243	ENSOGAG00000033979	SUPT5H	100	97.243	Otolemur_garnettii
MGP_CAROLIEiJ_G0029441	Supt5	100	96.140	ENSOARG00000006174	SUPT5H	100	96.140	Ovis_aries
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSPPAG00000040180	SUPT5H	100	97.518	Pan_paniscus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSPPRG00000009686	SUPT5H	100	97.426	Panthera_pardus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSPTIG00000011633	SUPT5H	100	97.426	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSPTRG00000010971	SUPT5H	100	97.518	Pan_troglodytes
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSPANG00000007383	SUPT5H	100	97.518	Papio_anubis
MGP_CAROLIEiJ_G0029441	Supt5	94	88.791	ENSPKIG00000006261	supt5h	94	88.813	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029441	Supt5	99	90.668	ENSPSIG00000014117	SUPT5H	99	90.668	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029441	Supt5	90	84.394	ENSPMGG00000020581	supt5h	96	84.394	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029441	Supt5	100	99.262	ENSPEMG00000015730	Supt5	100	99.262	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029441	Supt5	99	79.506	ENSPMAG00000006913	supt5h	94	80.214	Petromyzon_marinus
MGP_CAROLIEiJ_G0029441	Supt5	100	93.756	ENSPCIG00000010477	SUPT5H	100	94.307	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029441	Supt5	92	84.523	ENSPFOG00000011126	supt5h	94	87.196	Poecilia_formosa
MGP_CAROLIEiJ_G0029441	Supt5	94	87.426	ENSPLAG00000013092	supt5h	94	87.525	Poecilia_latipinna
MGP_CAROLIEiJ_G0029441	Supt5	87	87.779	ENSPMEG00000020479	supt5h	92	87.885	Poecilia_mexicana
MGP_CAROLIEiJ_G0029441	Supt5	99	83.287	ENSPREG00000006712	supt5h	94	85.010	Poecilia_reticulata
MGP_CAROLIEiJ_G0029441	Supt5	100	96.494	ENSPPYG00000009968	SUPT5H	100	96.494	Pongo_abelii
MGP_CAROLIEiJ_G0029441	Supt5	100	77.665	ENSPCAG00000010830	SUPT5H	100	80.239	Procavia_capensis
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSPCOG00000021231	SUPT5H	100	97.518	Propithecus_coquereli
MGP_CAROLIEiJ_G0029441	Supt5	80	96.739	ENSPVAG00000011129	SUPT5H	80	96.739	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029441	Supt5	94	85.320	ENSPNYG00000009203	supt5h	95	85.320	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029441	Supt5	94	82.347	ENSPNAG00000010925	supt5h	98	81.783	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029441	Supt5	100	96.863	ENSRNOG00000032034	Supt5h	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0029441	Supt5	98	96.701	ENSRBIG00000039828	SUPT5H	98	96.701	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029441	Supt5	100	97.518	ENSRROG00000019625	SUPT5H	100	97.518	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSSBOG00000022657	SUPT5H	100	97.426	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029441	Supt5	91	90.789	ENSSHAG00000009504	SUPT5H	100	91.357	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029441	Supt5	97	88.528	ENSSFOG00015005973	supt5h	99	86.452	Scleropages_formosus
MGP_CAROLIEiJ_G0029441	Supt5	87	87.002	ENSSMAG00000004503	supt5h	98	84.691	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029441	Supt5	94	88.276	ENSSDUG00000014520	supt5h	99	86.204	Seriola_dumerili
MGP_CAROLIEiJ_G0029441	Supt5	94	88.201	ENSSLDG00000008112	supt5h	99	85.952	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029441	Supt5	55	97.101	ENSSARG00000000997	-	64	97.101	Sorex_araneus
MGP_CAROLIEiJ_G0029441	Supt5	91	91.216	ENSSPUG00000011434	SUPT5H	95	91.095	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029441	Supt5	94	87.870	ENSSPAG00000010429	supt5h	99	85.635	Stegastes_partitus
MGP_CAROLIEiJ_G0029441	Supt5	99	94.090	ENSSSCG00000023556	SUPT5H	99	94.090	Sus_scrofa
MGP_CAROLIEiJ_G0029441	Supt5	94	86.207	ENSTRUG00000002370	supt5h	100	84.059	Takifugu_rubripes
MGP_CAROLIEiJ_G0029441	Supt5	94	87.059	ENSTNIG00000011178	supt5h	94	86.914	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029441	Supt5	66	83.380	ENSTBEG00000017617	SUPT5H	94	84.047	Tupaia_belangeri
MGP_CAROLIEiJ_G0029441	Supt5	100	96.507	ENSTTRG00000003573	SUPT5H	100	96.507	Tursiops_truncatus
MGP_CAROLIEiJ_G0029441	Supt5	100	97.426	ENSUAMG00000020014	SUPT5H	100	97.426	Ursus_americanus
MGP_CAROLIEiJ_G0029441	Supt5	100	94.940	ENSUMAG00000019558	SUPT5H	100	94.940	Ursus_maritimus
MGP_CAROLIEiJ_G0029441	Supt5	91	97.462	ENSVVUG00000006193	SUPT5H	94	97.462	Vulpes_vulpes
MGP_CAROLIEiJ_G0029441	Supt5	99	88.447	ENSXETG00000002888	supt5h	99	88.540	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029441	Supt5	99	83.116	ENSXMAG00000004169	supt5h	94	85.025	Xiphophorus_maculatus