EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029507 (Gene tree)
Gene ID: 110297721
Gene Symbol: Polr2i
Alias: 2810002B19Rik
Full Name: RNA polymerase II subunit I
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 1088 bases
Position: chr7:29479536-29480623
Accession: 110297721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0078607	RNA_POL_M_15KD	PF02150.16	1.2e-16	1	1
MGP_CAROLIEiJ_P0078605	RNA_POL_M_15KD	PF02150.16	8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0078607	-	426	-	MGP_CAROLIEiJ_P0078607	125 (aa)	XP_021022327	UPI0000001B8F
MGP_CAROLIEiJ_T0078609	-	451	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078608	-	436	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078610	-	299	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078606	-	579	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078605	-	508	-	MGP_CAROLIEiJ_P0078605	103 (aa)	-	UPI0000021715

Gene Model

Click here to download MGP_CAROLIEiJ_G0029507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029507	Polr2i	74	32.143	MGP_CAROLIEiJ_G0024823	Polr3k	77	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSG00000105258	POLR2I	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSAPOG00000012409	polr2i	96	96.694	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSAMEG00000000993	POLR2I	100	100.000	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSAOCG00000024378	polr2i	96	96.694	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSAPEG00000021748	polr2i	96	96.694	Amphiprion_percula
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSATEG00000000758	polr2i	96	96.694	Anabas_testudineus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSANAG00000035318	POLR2I	100	100.000	Aotus_nancymaae
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSACLG00000001663	polr2i	96	97.521	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSAMXG00000030198	polr2i	96	97.521	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSBTAG00000015002	POLR2I	100	100.000	Bos_taurus
MGP_CAROLIEiJ_G0029507	Polr2i	100	61.165	WBGene00022400	rpb-9	74	62.097	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCJAG00000009671	POLR2I	100	100.000	Callithrix_jacchus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCAFG00000006601	POLR2I	100	100.000	Canis_familiaris
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCAFG00020018113	POLR2I	100	100.000	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCHIG00000011961	POLR2I	100	100.000	Capra_hircus
MGP_CAROLIEiJ_G0029507	Polr2i	100	69.903	ENSTSYG00000031752	-	95	69.903	Carlito_syrichta
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSTSYG00000028318	-	100	100.000	Carlito_syrichta
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCPOG00000012097	POLR2I	100	100.000	Cavia_porcellus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCCAG00000022138	-	100	100.000	Cebus_capucinus
MGP_CAROLIEiJ_G0029507	Polr2i	100	98.400	ENSCCAG00000032214	-	100	98.400	Cebus_capucinus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCATG00000017413	POLR2I	100	100.000	Cercocebus_atys
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCLAG00000011800	POLR2I	100	100.000	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCSAG00000004254	POLR2I	100	100.000	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSCPBG00000006726	POLR2I	100	99.200	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029507	Polr2i	100	78.641	ENSCSAVG00000010630	-	93	80.342	Ciona_savignyi
MGP_CAROLIEiJ_G0029507	Polr2i	84	100.000	ENSCANG00000031951	POLR2I	100	100.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSCSEG00000002213	polr2i	96	95.041	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029507	Polr2i	100	95.146	ENSCVAG00000014797	polr2i	96	95.041	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSDARG00000040443	polr2i	96	95.868	Danio_rerio
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSDNOG00000015842	POLR2I	100	100.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029507	Polr2i	95	75.510	ENSDORG00000028728	-	95	76.577	Dipodomys_ordii
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSDORG00000001852	-	100	100.000	Dipodomys_ordii
MGP_CAROLIEiJ_G0029507	Polr2i	95	74.490	ENSDORG00000029259	-	95	78.070	Dipodomys_ordii
MGP_CAROLIEiJ_G0029507	Polr2i	93	76.042	ENSDORG00000028026	-	99	76.042	Dipodomys_ordii
MGP_CAROLIEiJ_G0029507	Polr2i	100	75.728	FBgn0004855	RpII15	91	78.632	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSETEG00000012679	POLR2I	100	100.000	Echinops_telfairi
MGP_CAROLIEiJ_G0029507	Polr2i	100	95.146	ENSEBUG00000007333	polr2i	100	95.146	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSEASG00005002231	POLR2I	100	100.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSECAG00000013654	POLR2I	100	100.000	Equus_caballus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSEEUG00000002113	POLR2I	100	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSELUG00000018012	polr2i	96	97.521	Esox_lucius
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSFCAG00000026052	POLR2I	100	100.000	Felis_catus
MGP_CAROLIEiJ_G0029507	Polr2i	50	92.063	ENSFALG00000006198	POLR2I	100	92.063	Ficedula_albicollis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSFDAG00000011350	POLR2I	100	100.000	Fukomys_damarensis
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSFHEG00000015659	polr2i	96	94.215	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSGMOG00000013806	polr2i	96	97.521	Gadus_morhua
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSGALG00000038595	POLR2I	96	94.400	Gallus_gallus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSGAFG00000001037	polr2i	96	96.694	Gambusia_affinis
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSGACG00000006679	polr2i	98	96.000	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSGAGG00000015806	POLR2I	100	99.200	Gopherus_agassizii
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSGGOG00000015426	POLR2I	100	100.000	Gorilla_gorilla
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSHBUG00000004140	polr2i	100	96.032	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSHGLG00000007388	POLR2I	100	100.000	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSHGLG00100014515	POLR2I	100	100.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSHCOG00000010967	polr2i	96	97.521	Hippocampus_comes
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSIPUG00000001127	polr2i	96	95.868	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSSTOG00000009411	POLR2I	100	100.000	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSJJAG00000014400	Polr2i	100	100.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSKMAG00000001567	polr2i	96	96.694	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSLBEG00000001220	polr2i	96	97.521	Labrus_bergylta
MGP_CAROLIEiJ_G0029507	Polr2i	67	98.810	ENSLBEG00000028538	-	94	98.810	Labrus_bergylta
MGP_CAROLIEiJ_G0029507	Polr2i	100	99.029	ENSLACG00000009590	POLR2I	100	95.200	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSLOCG00000014818	polr2i	96	97.521	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSLAFG00000015527	POLR2I	100	100.000	Loxodonta_africana
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMFAG00000039443	POLR2I	100	100.000	Macaca_fascicularis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMMUG00000000522	POLR2I	100	100.000	Macaca_mulatta
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMNEG00000029421	POLR2I	100	99.200	Macaca_nemestrina
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMLEG00000039720	POLR2I	100	100.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSMAMG00000013970	polr2i	96	95.868	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSMZEG00005013082	polr2i	96	97.521	Maylandia_zebra
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSMGAG00000008576	POLR2I	100	94.400	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMAUG00000001001	Polr2i	100	100.000	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMICG00000010241	POLR2I	100	100.000	Microcebus_murinus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMOCG00000011984	Polr2i	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSMMOG00000004945	polr2i	100	97.087	Mola_mola
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMODG00000014172	POLR2I	100	100.000	Monodelphis_domestica
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMUSG00000019738	Polr2i	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	MGP_PahariEiJ_G0012741	Polr2i	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	MGP_SPRETEiJ_G0030603	Polr2i	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMPUG00000005702	POLR2I	100	100.000	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSMLUG00000012317	POLR2I	100	100.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSNGAG00000014966	Polr2i	100	100.000	Nannospalax_galili
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSNBRG00000000723	polr2i	96	96.694	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSNLEG00000011691	POLR2I	100	100.000	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029507	Polr2i	100	99.029	ENSOPRG00000008681	-	100	98.400	Ochotona_princeps
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSOPRG00000001789	-	100	99.200	Ochotona_princeps
MGP_CAROLIEiJ_G0029507	Polr2i	100	81.553	ENSODEG00000017901	-	88	82.759	Octodon_degus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSODEG00000015015	-	100	100.000	Octodon_degus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSONIG00000005397	polr2i	96	97.521	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029507	Polr2i	100	99.029	ENSOCUG00000024998	-	100	97.600	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSOCUG00000013044	POLR2I	100	100.000	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSORLG00000013308	polr2i	96	95.868	Oryzias_latipes
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSORLG00020011281	polr2i	96	95.868	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSORLG00015019529	polr2i	96	95.868	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSOMEG00000012586	polr2i	96	95.868	Oryzias_melastigma
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSOGAG00000024254	POLR2I	100	100.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSOARG00000005266	POLR2I	100	100.000	Ovis_aries
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPPAG00000033446	POLR2I	100	100.000	Pan_paniscus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPPRG00000007194	POLR2I	100	100.000	Panthera_pardus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPTIG00000018661	POLR2I	100	100.000	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPTRG00000010885	POLR2I	100	100.000	Pan_troglodytes
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPANG00000004508	POLR2I	100	100.000	Papio_anubis
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSPKIG00000001086	polr2i	96	97.521	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPSIG00000011560	POLR2I	100	100.000	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSPMGG00000016154	polr2i	96	92.000	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPEMG00000014212	Polr2i	100	100.000	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPCIG00000015436	-	100	100.000	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSPFOG00000016816	polr2i	96	96.694	Poecilia_formosa
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSPLAG00000010639	polr2i	96	96.694	Poecilia_latipinna
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSPMEG00000005956	polr2i	96	96.694	Poecilia_mexicana
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSPREG00000004227	polr2i	96	96.694	Poecilia_reticulata
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPPYG00000009897	POLR2I	100	100.000	Pongo_abelii
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPCAG00000003494	POLR2I	100	100.000	Procavia_capensis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPCOG00000018643	POLR2I	100	100.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSPVAG00000012883	POLR2I	100	100.000	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSPNYG00000011908	polr2i	96	97.521	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSPNAG00000005859	polr2i	96	97.521	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSRNOG00000050560	Polr2i	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSRNOG00000020799	LOC103690054	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSRBIG00000037225	POLR2I	100	100.000	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSRROG00000042843	POLR2I	100	100.000	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029507	Polr2i	99	43.137	YGL070C	RPB9	89	45.045	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0029507	Polr2i	100	78.641	ENSSBOG00000022998	-	74	78.400	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSSBOG00000030799	-	100	100.000	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSSFOG00015022523	polr2i	96	97.521	Scleropages_formosus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSSMAG00000003335	polr2i	96	96.694	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSSDUG00000005483	polr2i	96	96.694	Seriola_dumerili
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSSLDG00000009341	polr2i	96	96.694	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSSARG00000009331	POLR2I	100	100.000	Sorex_araneus
MGP_CAROLIEiJ_G0029507	Polr2i	100	99.029	ENSSPUG00000012658	POLR2I	100	97.600	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSSPAG00000015734	polr2i	96	97.521	Stegastes_partitus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSSSCG00000039196	POLR2I	100	100.000	Sus_scrofa
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSTRUG00000022235	polr2i	96	97.521	Takifugu_rubripes
MGP_CAROLIEiJ_G0029507	Polr2i	100	97.087	ENSTNIG00000011737	polr2i	96	97.521	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSTTRG00000003919	POLR2I	100	100.000	Tursiops_truncatus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSUAMG00000020575	POLR2I	100	100.000	Ursus_americanus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSUMAG00000020809	POLR2I	100	100.000	Ursus_maritimus
MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	ENSVVUG00000013588	POLR2I	100	100.000	Vulpes_vulpes
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSXCOG00000001119	polr2i	96	96.694	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029507	Polr2i	100	96.117	ENSXMAG00000021278	polr2i	96	96.694	Xiphophorus_maculatus